Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06130 and MPMX19_06131 are separated by 226 nucleotides MPMX19_06131 and MPMX19_06132 are separated by 121 nucleotides MPMX19_06132 and MPMX19_06133 are separated by 151 nucleotides
MPMX19_06130: MPMX19_06130 - hypothetical protein, at 317,359 to 319,071
_06130
MPMX19_06131: MPMX19_06131 - Ribose-phosphate pyrophosphokinase, at 319,298 to 320,209
_06131
MPMX19_06132: MPMX19_06132 - hypothetical protein, at 320,331 to 320,855
_06132
MPMX19_06133: MPMX19_06133 - Zinc transport protein ZntB, at 321,007 to 322,038
_06133
Position (kb) 319
320
321 Strain fitness (log2 ratio) -2
-1
0
1
2 at 318.762 kb on - strand, within MPMX19_06130 at 318.803 kb on + strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 318.804 kb on - strand, within MPMX19_06130 at 319.307 kb on - strand at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.455 kb on + strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.456 kb on - strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.923 kb on + strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.924 kb on - strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.932 kb on + strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 319.933 kb on - strand, within MPMX19_06131 at 320.051 kb on + strand, within MPMX19_06131 at 320.175 kb on + strand at 320.175 kb on + strand at 320.176 kb on - strand at 320.176 kb on - strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.187 kb on + strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.188 kb on - strand at 320.198 kb on - strand at 320.224 kb on + strand at 320.224 kb on + strand at 320.224 kb on + strand at 320.225 kb on - strand at 320.225 kb on - strand at 320.225 kb on - strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.260 kb on + strand at 320.261 kb on - strand at 320.261 kb on - strand at 320.261 kb on - strand at 320.261 kb on - strand at 320.332 kb on + strand at 320.333 kb on - strand at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.650 kb on + strand, within MPMX19_06132 at 320.651 kb on - strand, within MPMX19_06132 at 320.651 kb on - strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.656 kb on + strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.657 kb on - strand, within MPMX19_06132 at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.827 kb on + strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.828 kb on - strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.963 kb on + strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 320.964 kb on - strand at 321.094 kb on + strand at 321.095 kb on - strand at 321.095 kb on - strand at 321.095 kb on - strand at 321.095 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 318,762 - MPMX19_06130 0.82 +0.2 318,803 + MPMX19_06130 0.84 -0.9 318,804 - MPMX19_06130 0.84 -1.1 318,804 - MPMX19_06130 0.84 -0.2 318,804 - MPMX19_06130 0.84 -1.4 319,307 - -0.3 319,455 + MPMX19_06131 0.17 -0.2 319,455 + MPMX19_06131 0.17 -0.8 319,455 + MPMX19_06131 0.17 +1.5 319,455 + MPMX19_06131 0.17 +1.1 319,455 + MPMX19_06131 0.17 -0.8 319,455 + MPMX19_06131 0.17 -1.1 319,455 + MPMX19_06131 0.17 -0.2 319,455 + MPMX19_06131 0.17 -2.1 319,456 - MPMX19_06131 0.17 -0.7 319,456 - MPMX19_06131 0.17 +0.6 319,456 - MPMX19_06131 0.17 -1.7 319,456 - MPMX19_06131 0.17 -0.2 319,456 - MPMX19_06131 0.17 -1.1 319,456 - MPMX19_06131 0.17 -1.1 319,923 + MPMX19_06131 0.69 -2.3 319,923 + MPMX19_06131 0.69 +0.1 319,923 + MPMX19_06131 0.69 -1.6 319,923 + MPMX19_06131 0.69 -0.2 319,923 + MPMX19_06131 0.69 +0.8 319,923 + MPMX19_06131 0.69 -1.9 319,923 + MPMX19_06131 0.69 -0.5 319,923 + MPMX19_06131 0.69 -0.7 319,923 + MPMX19_06131 0.69 -1.4 319,923 + MPMX19_06131 0.69 -0.8 319,923 + MPMX19_06131 0.69 -0.6 319,923 + MPMX19_06131 0.69 -1.9 319,923 + MPMX19_06131 0.69 -0.9 319,923 + MPMX19_06131 0.69 +0.6 319,923 + MPMX19_06131 0.69 +1.3 319,923 + MPMX19_06131 0.69 +1.1 319,923 + MPMX19_06131 0.69 -0.3 319,923 + MPMX19_06131 0.69 -1.2 319,923 + MPMX19_06131 0.69 +1.2 319,923 + MPMX19_06131 0.69 +1.2 319,923 + MPMX19_06131 0.69 -0.4 319,923 + MPMX19_06131 0.69 -1.4 319,923 + MPMX19_06131 0.69 -0.1 319,923 + MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 -1.1 319,924 - MPMX19_06131 0.69 -0.9 319,924 - MPMX19_06131 0.69 +0.3 319,924 - MPMX19_06131 0.69 -0.3 319,924 - MPMX19_06131 0.69 +1.8 319,924 - MPMX19_06131 0.69 -0.0 319,924 - MPMX19_06131 0.69 -0.7 319,924 - MPMX19_06131 0.69 -1.4 319,924 - MPMX19_06131 0.69 -0.5 319,924 - MPMX19_06131 0.69 -0.4 319,924 - MPMX19_06131 0.69 -2.2 319,924 - MPMX19_06131 0.69 +0.3 319,924 - MPMX19_06131 0.69 +0.1 319,924 - MPMX19_06131 0.69 +0.3 319,924 - MPMX19_06131 0.69 +0.1 319,924 - MPMX19_06131 0.69 -0.2 319,924 - MPMX19_06131 0.69 -0.4 319,924 - MPMX19_06131 0.69 -1.3 319,924 - MPMX19_06131 0.69 -0.7 319,924 - MPMX19_06131 0.69 -0.9 319,924 - MPMX19_06131 0.69 +0.5 319,924 - MPMX19_06131 0.69 -1.7 319,924 - MPMX19_06131 0.69 +0.2 319,924 - MPMX19_06131 0.69 -1.1 319,924 - MPMX19_06131 0.69 -2.3 319,932 + MPMX19_06131 0.70 -1.7 319,932 + MPMX19_06131 0.70 -0.7 319,932 + MPMX19_06131 0.70 +0.5 319,932 + MPMX19_06131 0.70 +0.6 319,932 + MPMX19_06131 0.70 -0.4 319,932 + MPMX19_06131 0.70 +0.6 319,932 + MPMX19_06131 0.70 +1.4 319,932 + MPMX19_06131 0.70 +0.8 319,932 + MPMX19_06131 0.70 +0.1 319,932 + MPMX19_06131 0.70 -0.1 319,932 + MPMX19_06131 0.70 +0.1 319,932 + MPMX19_06131 0.70 -1.2 319,932 + MPMX19_06131 0.70 -0.2 319,932 + MPMX19_06131 0.70 -1.6 319,932 + MPMX19_06131 0.70 +1.1 319,932 + MPMX19_06131 0.70 -0.6 319,932 + MPMX19_06131 0.70 -0.8 319,933 - MPMX19_06131 0.70 -0.2 319,933 - MPMX19_06131 0.70 -0.4 319,933 - MPMX19_06131 0.70 -0.4 319,933 - MPMX19_06131 0.70 -0.5 319,933 - MPMX19_06131 0.70 +1.1 319,933 - MPMX19_06131 0.70 -1.7 319,933 - MPMX19_06131 0.70 +0.9 319,933 - MPMX19_06131 0.70 +0.2 319,933 - MPMX19_06131 0.70 +0.2 319,933 - MPMX19_06131 0.70 -0.6 319,933 - MPMX19_06131 0.70 -0.7 319,933 - MPMX19_06131 0.70 +0.8 320,051 + MPMX19_06131 0.83 -0.9 320,175 + -0.1 320,175 + -1.1 320,176 - -0.2 320,176 - +0.6 320,187 + +0.5 320,187 + +0.7 320,187 + +0.3 320,187 + -0.4 320,187 + +0.8 320,187 + +0.5 320,187 + +0.2 320,187 + +0.8 320,187 + +0.3 320,187 + +0.2 320,187 + +0.5 320,187 + +0.6 320,188 - -1.0 320,188 - +0.6 320,188 - -0.5 320,188 - -0.3 320,188 - +1.4 320,188 - +0.3 320,188 - -0.4 320,188 - -0.8 320,188 - +0.4 320,198 - +0.8 320,224 + +0.0 320,224 + -0.7 320,224 + +1.5 320,225 - -1.2 320,225 - -0.2 320,225 - -0.6 320,260 + -0.8 320,260 + -2.1 320,260 + +0.1 320,260 + -0.4 320,260 + -1.6 320,260 + +0.3 320,261 - -0.6 320,261 - -0.4 320,261 - +0.1 320,261 - +0.5 320,332 + +1.0 320,333 - +0.8 320,650 + MPMX19_06132 0.61 -0.4 320,650 + MPMX19_06132 0.61 -0.6 320,650 + MPMX19_06132 0.61 -0.7 320,650 + MPMX19_06132 0.61 -0.9 320,650 + MPMX19_06132 0.61 -1.2 320,651 - MPMX19_06132 0.61 +0.2 320,651 - MPMX19_06132 0.61 +1.3 320,656 + MPMX19_06132 0.62 -1.2 320,656 + MPMX19_06132 0.62 +0.8 320,656 + MPMX19_06132 0.62 +0.8 320,656 + MPMX19_06132 0.62 -0.1 320,656 + MPMX19_06132 0.62 +0.5 320,656 + MPMX19_06132 0.62 -0.2 320,656 + MPMX19_06132 0.62 -0.2 320,656 + MPMX19_06132 0.62 -0.0 320,657 - MPMX19_06132 0.62 -0.0 320,657 - MPMX19_06132 0.62 -0.2 320,657 - MPMX19_06132 0.62 +0.6 320,657 - MPMX19_06132 0.62 -1.6 320,657 - MPMX19_06132 0.62 -1.6 320,657 - MPMX19_06132 0.62 +0.1 320,657 - MPMX19_06132 0.62 -0.2 320,657 - MPMX19_06132 0.62 -0.1 320,657 - MPMX19_06132 0.62 +0.6 320,827 + +0.4 320,827 + -0.5 320,827 + +0.6 320,827 + -0.1 320,827 + -0.2 320,827 + +0.8 320,827 + -1.4 320,827 + -0.9 320,827 + -0.7 320,828 - -1.1 320,828 - +0.3 320,828 - -0.1 320,828 - +1.1 320,828 - +0.8 320,828 - -0.2 320,828 - -0.2 320,828 - -0.7 320,963 + +0.3 320,963 + -0.4 320,963 + -0.1 320,963 + -0.4 320,963 + -0.5 320,963 + -0.8 320,963 + -1.0 320,964 - +0.2 320,964 - +0.4 320,964 - -1.5 320,964 - -0.1 320,964 - -0.5 320,964 - -0.5 320,964 - +0.3 320,964 - -1.5 320,964 - -1.5 320,964 - -0.4 320,964 - -1.2 320,964 - -0.2 320,964 - +0.5 321,094 + -0.1 321,095 - +0.6 321,095 - -1.8 321,095 - +0.8 321,095 - -1.4
Or see this region's nucleotide sequence