Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05962

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
109,161	+				+0.5
109,161	+				+0.9
109,161	+				-0.0
109,161	+				-0.1
109,161	+				+0.6
109,161	+				-0.5
109,161	+				-2.6
109,161	+				-0.3
109,161	+				+1.0
109,161	+				-1.7
109,162	-				+0.1
109,162	-				-1.9
109,162	-				-0.1
109,162	-				+0.9
109,162	-				+0.4
109,162	-				+0.1
109,162	-				-0.1
109,162	-				-1.1
109,162	-				+1.2
109,162	-				+0.1
109,162	-				+0.1
109,162	-				+0.5
109,162	-				-1.3
109,162	-				-1.7
109,162	-				+1.0
109,162	-				-0.9
109,215	+				+0.3
109,215	+				-0.7
109,215	+				+0.0
109,216	-				+0.1
109,216	-				+0.2
109,216	-				-0.1
109,216	-				+0.3
109,216	-				-1.7
109,216	-				-0.2
109,216	-				-0.2
109,466	+		MPMX19_05961	0.38	-0.1
109,466	+		MPMX19_05961	0.38	-0.7
109,466	+		MPMX19_05961	0.38	-1.0
109,466	+		MPMX19_05961	0.38	-1.1
109,466	+		MPMX19_05961	0.38	-0.7
109,466	+		MPMX19_05961	0.38	-1.7
109,466	+		MPMX19_05961	0.38	+1.1
109,466	+		MPMX19_05961	0.38	+0.7
109,466	+		MPMX19_05961	0.38	+0.7
109,466	+		MPMX19_05961	0.38	+0.2
109,466	+		MPMX19_05961	0.38	+0.2
109,466	+		MPMX19_05961	0.38	+0.1
109,466	+		MPMX19_05961	0.38	+0.0
109,466	+		MPMX19_05961	0.38	-0.5
109,466	+		MPMX19_05961	0.38	-0.7
109,466	+		MPMX19_05961	0.38	-1.5
109,466	+		MPMX19_05961	0.38	-0.8
109,466	+		MPMX19_05961	0.38	-1.5
109,466	+		MPMX19_05961	0.38	-0.8
109,467	-		MPMX19_05961	0.38	+0.3
109,467	-		MPMX19_05961	0.38	-0.5
109,467	-		MPMX19_05961	0.38	-0.9
109,467	-		MPMX19_05961	0.38	-0.3
109,467	-		MPMX19_05961	0.38	-0.1
109,467	-		MPMX19_05961	0.38	+0.4
109,467	-		MPMX19_05961	0.38	-0.1
109,467	-		MPMX19_05961	0.38	-2.1
109,467	-		MPMX19_05961	0.38	+0.1
109,467	-		MPMX19_05961	0.38	+0.0
109,467	-		MPMX19_05961	0.38	-1.7
109,467	-		MPMX19_05961	0.38	-0.1
109,467	-		MPMX19_05961	0.38	-1.1
109,467	-		MPMX19_05961	0.38	+0.0
109,467	-		MPMX19_05961	0.38	-0.5
109,467	-		MPMX19_05961	0.38	+0.5
109,712	+		MPMX19_05961	0.90	-0.1
109,712	+		MPMX19_05961	0.90	-0.3
109,712	+		MPMX19_05961	0.90	+0.1
109,713	-				+0.4
109,713	-				-0.8
109,713	-				-1.5
109,757	+				+0.1
109,757	+				-0.7
109,757	+				-0.9
109,757	+				+0.1
109,757	+				-0.1
109,758	-				+1.0
109,758	-				-0.6
109,758	-				+1.1
109,758	-				-0.1
109,758	-				-0.4
109,836	+				-0.1
109,836	+				-0.5
109,837	-				+0.3
109,837	-				-0.3
109,837	-				+1.5
109,837	-				+0.7
110,105	+		MPMX19_05962	0.17	-0.1
110,105	+		MPMX19_05962	0.17	+0.5
110,105	+		MPMX19_05962	0.17	+0.1
110,105	+		MPMX19_05962	0.17	+0.2
110,105	+		MPMX19_05962	0.17	-0.3
110,105	+		MPMX19_05962	0.17	+1.4
110,106	-		MPMX19_05962	0.18	-0.1
110,106	-		MPMX19_05962	0.18	-0.3
110,106	-		MPMX19_05962	0.18	+1.1
110,106	-		MPMX19_05962	0.18	+0.1
110,117	+		MPMX19_05962	0.18	+0.7
110,118	-		MPMX19_05962	0.18	+1.7
110,118	-		MPMX19_05962	0.18	-0.3
110,168	+		MPMX19_05962	0.22	-1.8
110,168	+		MPMX19_05962	0.22	-2.1
110,168	+		MPMX19_05962	0.22	-1.3
110,168	+		MPMX19_05962	0.22	-0.9
110,168	+		MPMX19_05962	0.22	+0.1
110,169	-		MPMX19_05962	0.22	+0.7
110,169	-		MPMX19_05962	0.22	-1.8
110,169	-		MPMX19_05962	0.22	+1.2
110,169	-		MPMX19_05962	0.22	-0.2
110,300	+		MPMX19_05962	0.32	-0.7
110,300	+		MPMX19_05962	0.32	-0.3
110,301	-		MPMX19_05962	0.32	+0.4
110,301	-		MPMX19_05962	0.32	-0.3
110,384	+		MPMX19_05962	0.38	-1.2
110,384	+		MPMX19_05962	0.38	-0.5
110,659	+		MPMX19_05962	0.59	-0.2
110,659	+		MPMX19_05962	0.59	+0.1
110,659	+		MPMX19_05962	0.59	-0.2
110,659	+		MPMX19_05962	0.59	+0.1
110,659	+		MPMX19_05962	0.59	-1.1
110,659	+		MPMX19_05962	0.59	+0.7
110,659	+		MPMX19_05962	0.59	-0.4
110,659	+		MPMX19_05962	0.59	+0.8
110,660	-		MPMX19_05962	0.59	-0.1
110,660	-		MPMX19_05962	0.59	-0.9
110,660	-		MPMX19_05962	0.59	-0.1
110,660	-		MPMX19_05962	0.59	-0.9
110,660	-		MPMX19_05962	0.59	+0.5
110,660	-		MPMX19_05962	0.59	-0.5
110,660	-		MPMX19_05962	0.59	-0.3
110,660	-		MPMX19_05962	0.59	-0.4
110,660	-		MPMX19_05962	0.59	-1.4
110,660	-		MPMX19_05962	0.59	-0.9
110,873	+		MPMX19_05962	0.75	+1.0
110,873	+		MPMX19_05962	0.75	+1.3
110,873	+		MPMX19_05962	0.75	+0.8
110,874	-		MPMX19_05962	0.75	-1.7
110,969	+		MPMX19_05962	0.82	+1.8
111,044	+		MPMX19_05962	0.87	+0.1
111,045	-		MPMX19_05962	0.88	+0.4
111,050	+		MPMX19_05962	0.88	-1.3
111,050	+		MPMX19_05962	0.88	-0.7
111,050	+		MPMX19_05962	0.88	+0.0
111,050	+		MPMX19_05962	0.88	+1.2
111,050	+		MPMX19_05962	0.88	+0.7
111,050	+		MPMX19_05962	0.88	+1.1
111,050	+		MPMX19_05962	0.88	+0.9
111,050	+		MPMX19_05962	0.88	-0.2
111,051	-		MPMX19_05962	0.88	-0.1
111,051	-		MPMX19_05962	0.88	+0.4
111,051	-		MPMX19_05962	0.88	+0.4
111,122	+				+0.1
111,122	+				-0.0
111,122	+				-1.4
111,122	+				-0.3
111,122	+				-1.3
111,122	+				+0.6
111,122	+				-2.7
111,123	-				+0.7
111,123	-				-0.1
111,123	-				+1.2
111,123	-				-0.8
111,125	+				-0.1
111,126	-				-0.2
111,126	-				+1.0
111,217	+				+0.5
111,217	+				-0.1
111,217	+				+1.3
111,573	+		MPMX19_05963	0.19	-0.7
111,573	+		MPMX19_05963	0.19	-1.0
111,573	+		MPMX19_05963	0.19	-0.5
111,573	+		MPMX19_05963	0.19	-1.5
111,573	+		MPMX19_05963	0.19	-0.5
111,573	+		MPMX19_05963	0.19	-1.7
111,573	+		MPMX19_05963	0.19	+0.3
111,573	+		MPMX19_05963	0.19	-1.3
111,573	+		MPMX19_05963	0.19	-0.6
111,574	-		MPMX19_05963	0.19	-0.1
111,574	-		MPMX19_05963	0.19	-0.9
111,574	-		MPMX19_05963	0.19	-0.5
111,574	-		MPMX19_05963	0.19	+0.3
111,730	+		MPMX19_05963	0.27	-0.6
111,730	+		MPMX19_05963	0.27	+1.7
111,730	+		MPMX19_05963	0.27	-1.6
111,730	+		MPMX19_05963	0.27	-0.3
111,730	+		MPMX19_05963	0.27	-0.1
111,730	+		MPMX19_05963	0.27	+0.5
111,731	-		MPMX19_05963	0.27	+0.1
111,731	-		MPMX19_05963	0.27	+0.2
111,763	+		MPMX19_05963	0.29	-2.0
111,763	+		MPMX19_05963	0.29	+1.2
111,763	+		MPMX19_05963	0.29	-2.0
111,763	+		MPMX19_05963	0.29	+0.9
111,763	+		MPMX19_05963	0.29	-1.6
111,764	-		MPMX19_05963	0.29	-0.5
111,764	-		MPMX19_05963	0.29	-1.1
111,764	-		MPMX19_05963	0.29	+0.1
111,764	-		MPMX19_05963	0.29	-1.9
111,764	-		MPMX19_05963	0.29	-0.1
111,764	-		MPMX19_05963	0.29	+1.3
111,764	-		MPMX19_05963	0.29	+1.1
111,764	-		MPMX19_05963	0.29	-0.3
111,764	-		MPMX19_05963	0.29	-0.7
111,775	+		MPMX19_05963	0.30	+0.1
111,775	+		MPMX19_05963	0.30	-0.2
111,776	-		MPMX19_05963	0.30	+1.4
111,776	-		MPMX19_05963	0.30	+0.3
111,856	+		MPMX19_05963	0.34	-1.4
111,856	+		MPMX19_05963	0.34	-2.7
111,856	+		MPMX19_05963	0.34	-1.8
111,856	+		MPMX19_05963	0.34	-0.1
111,856	+		MPMX19_05963	0.34	+0.4
111,857	-		MPMX19_05963	0.34	-0.3
111,857	-		MPMX19_05963	0.34	+0.8
111,857	-		MPMX19_05963	0.34	+0.2
111,857	-		MPMX19_05963	0.34	-0.1
111,857	-		MPMX19_05963	0.34	+0.3
111,857	-		MPMX19_05963	0.34	+0.7
111,857	-		MPMX19_05963	0.34	-2.1
112,129	+		MPMX19_05963	0.48	-1.8
112,129	+		MPMX19_05963	0.48	+1.3
112,129	+		MPMX19_05963	0.48	-0.2
112,130	-		MPMX19_05963	0.48	-0.9
112,130	-		MPMX19_05963	0.48	-0.8
112,130	-		MPMX19_05963	0.48	-0.2