Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05452

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
140,408	+				+1.4
140,409	-				+0.4
140,417	+				+0.4
140,417	+				-0.4
140,711	+				-0.1
140,768	+				-1.6
140,905	+				-1.6
140,924	+				+0.6
140,925	-				-0.7
140,991	+				+0.0
140,991	+				+0.7
140,992	-				-0.7
140,992	-				-0.9
141,078	-				+0.2
141,258	+				-0.8
141,259	-				-1.4
141,275	+				+1.6
141,316	+				-1.0
141,316	+				-0.2
141,316	+				-0.6
141,316	+				+0.2
141,317	-				-1.5
141,317	-				-1.6
141,464	-		MPMX19_05452	0.36	-1.4
141,590	+		MPMX19_05452	0.65	+0.2
141,590	+		MPMX19_05452	0.65	-0.5
141,590	+		MPMX19_05452	0.65	+0.2
141,590	+		MPMX19_05452	0.65	-2.0
141,591	-		MPMX19_05452	0.65	+0.8
141,591	-		MPMX19_05452	0.65	-1.0
141,591	-		MPMX19_05452	0.65	-2.2
141,596	+		MPMX19_05452	0.66	-0.9
141,596	+		MPMX19_05452	0.66	+0.0
141,597	-		MPMX19_05452	0.67	-0.4
141,597	-		MPMX19_05452	0.67	-0.7
141,597	-		MPMX19_05452	0.67	+0.1
141,709	+				+0.0
141,709	+				-0.4
141,709	+				-0.6
141,709	+				-1.6
141,709	+				+0.8
141,709	+				-0.1
141,709	+				-0.2
141,709	+				-1.5
141,710	-				+0.6
141,710	-				+0.3
141,710	-				+0.1
141,710	-				-0.5
141,710	-				+0.1
141,710	-				-0.2
141,710	-				+1.6
141,710	-				-1.0
141,710	-				-1.1
141,710	-				-0.2
141,710	-				-1.4
141,710	-				-0.6
141,773	+				-0.0
141,773	+				-1.8
141,773	+				-0.6
141,773	+				+1.0
141,773	+				-0.5
141,773	+				+0.5
141,773	+				-1.3
141,773	+				-0.6
141,773	+				-1.6
141,774	-				-0.4
141,774	-				+0.0
141,774	-				-1.0
141,774	-				-1.7
141,774	-				+1.0
141,774	-				+0.0
141,774	-				-0.2
141,774	-				-0.4
141,774	-				+0.3
141,956	+		MPMX19_05453	0.55	-0.8
141,957	-		MPMX19_05453	0.55	+0.0
141,957	-		MPMX19_05453	0.55	-0.6
141,957	-		MPMX19_05453	0.55	-1.0
141,957	-		MPMX19_05453	0.55	-1.2
142,060	+		MPMX19_05453	0.82	+1.4
142,060	+		MPMX19_05453	0.82	-0.1
142,060	+		MPMX19_05453	0.82	-0.6
142,060	+		MPMX19_05453	0.82	-0.5
142,061	-		MPMX19_05453	0.82	+0.0
142,061	-		MPMX19_05453	0.82	-0.5
142,061	-		MPMX19_05453	0.82	-0.8
142,072	-		MPMX19_05453	0.85	-1.7
142,072	-		MPMX19_05453	0.85	-1.2
142,072	-		MPMX19_05453	0.85	+1.4
142,139	+				-0.3
142,139	+				-0.7
142,140	-				-0.1
142,140	-				-0.9
142,164	+				-0.6
142,164	+				-1.8
142,164	+				+0.4
142,164	+				-2.2
142,164	+				+1.4
142,164	+				-0.3
142,164	+				-1.2
142,164	+				-1.2
142,164	+				-1.2
142,164	+				+0.4
142,164	+				-0.7
142,164	+				-0.4
142,164	+				-1.0
142,164	+				-1.6
142,164	+				+1.4
142,164	+				+0.2
142,165	-				-0.1
142,165	-				-1.2
142,165	-				-1.6
142,165	-				-2.1
142,165	-				-2.4
142,165	-				+1.0
142,165	-				-0.5
142,165	-				-0.8
142,165	-				+0.8
142,165	-				+0.3
142,165	-				+0.2
142,165	-				-1.1
142,165	-				-1.4
142,165	-				+0.2
142,170	+				-0.5
142,170	+				-1.1
142,171	-				-0.4
142,171	-				-1.5
142,171	-				-1.4
142,195	+				-0.1
142,196	-				-0.6
142,269	+				-1.1
142,269	+				-0.3
142,270	-				-1.2
142,270	-				-0.3
142,270	-				+0.0
142,290	-				-0.1
142,329	+				+0.5
142,329	+				-0.4
142,329	+				-1.7
142,329	+				-0.7
142,330	-				+0.2
142,330	-				-1.7
142,330	-				-0.8
142,330	-				-0.1
142,330	-				-1.0
142,330	-				+0.0
142,330	-				-1.0
142,330	-				-1.0
142,655	+		MPMX19_05454	0.69	-1.2
142,655	+		MPMX19_05454	0.69	-1.2
142,655	+		MPMX19_05454	0.69	+0.3
142,655	+		MPMX19_05454	0.69	-1.0
142,655	+		MPMX19_05454	0.69	-0.7
142,656	-		MPMX19_05454	0.69	+1.2
142,656	-		MPMX19_05454	0.69	+0.6
142,656	-		MPMX19_05454	0.69	-1.2
142,656	-		MPMX19_05454	0.69	+0.2
142,656	-		MPMX19_05454	0.69	-0.2