Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05217

Experiment: NL-CCM, start OD=0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_05216 and MPMX19_05217 are separated by 166 nucleotidesMPMX19_05217 and MPMX19_05218 are separated by 121 nucleotides MPMX19_05216: MPMX19_05216 - hypothetical protein, at 741,476 to 743,158 _05216 MPMX19_05217: MPMX19_05217 - Flagellin, at 743,325 to 744,149 _05217 MPMX19_05218: MPMX19_05218 - hypothetical protein, at 744,271 to 745,176 _05218 Position (kb) 743 744 745Strain fitness (log2 ratio) -2 -1 0 1 2at 742.345 kb on - strand, within MPMX19_05216at 742.345 kb on - strand, within MPMX19_05216at 742.345 kb on - strand, within MPMX19_05216at 742.345 kb on - strand, within MPMX19_05216at 742.345 kb on - strand, within MPMX19_05216at 742.345 kb on - strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.563 kb on + strand, within MPMX19_05216at 742.564 kb on - strand, within MPMX19_05216at 742.564 kb on - strand, within MPMX19_05216at 742.564 kb on - strand, within MPMX19_05216at 742.564 kb on - strand, within MPMX19_05216at 742.564 kb on - strand, within MPMX19_05216at 742.564 kb on - strand, within MPMX19_05216at 742.719 kb on + strand, within MPMX19_05216at 742.800 kb on + strand, within MPMX19_05216at 742.800 kb on + strand, within MPMX19_05216at 742.800 kb on + strand, within MPMX19_05216at 742.800 kb on + strand, within MPMX19_05216at 742.801 kb on - strand, within MPMX19_05216at 742.801 kb on - strand, within MPMX19_05216at 742.860 kb on + strand, within MPMX19_05216at 742.860 kb on + strand, within MPMX19_05216at 742.860 kb on + strand, within MPMX19_05216at 742.860 kb on + strand, within MPMX19_05216at 742.860 kb on + strand, within MPMX19_05216at 742.861 kb on - strand, within MPMX19_05216at 742.861 kb on - strand, within MPMX19_05216at 742.861 kb on - strand, within MPMX19_05216at 742.861 kb on - strand, within MPMX19_05216at 742.969 kb on + strand, within MPMX19_05216at 742.969 kb on + strand, within MPMX19_05216at 742.971 kb on + strand, within MPMX19_05216at 742.971 kb on + strand, within MPMX19_05216at 742.971 kb on + strand, within MPMX19_05216at 742.971 kb on + strand, within MPMX19_05216at 742.972 kb on - strand, within MPMX19_05216at 742.972 kb on - strand, within MPMX19_05216at 742.972 kb on - strand, within MPMX19_05216at 742.972 kb on - strand, within MPMX19_05216at 742.972 kb on - strand, within MPMX19_05216at 742.972 kb on - strand, within MPMX19_05216at 742.972 kb on - strand, within MPMX19_05216at 743.068 kb on - strandat 743.109 kb on + strandat 743.109 kb on + strandat 743.821 kb on + strand, within MPMX19_05217at 743.822 kb on - strand, within MPMX19_05217at 744.103 kb on + strandat 744.103 kb on + strandat 744.103 kb on + strandat 744.104 kb on - strandat 744.104 kb on - strandat 744.278 kb on + strandat 744.278 kb on + strandat 744.278 kb on + strandat 744.279 kb on - strandat 744.279 kb on - strandat 744.279 kb on - strandat 744.279 kb on - strandat 744.279 kb on - strandat 744.279 kb on - strandat 744.279 kb on - strandat 744.632 kb on + strand, within MPMX19_05218at 744.632 kb on + strand, within MPMX19_05218at 744.633 kb on - strand, within MPMX19_05218at 744.633 kb on - strand, within MPMX19_05218at 744.633 kb on - strand, within MPMX19_05218at 744.689 kb on + strand, within MPMX19_05218at 744.690 kb on - strand, within MPMX19_05218at 744.690 kb on - strand, within MPMX19_05218at 744.690 kb on - strand, within MPMX19_05218at 744.716 kb on + strand, within MPMX19_05218at 744.716 kb on + strand, within MPMX19_05218at 744.717 kb on - strand, within MPMX19_05218at 744.717 kb on - strand, within MPMX19_05218at 744.717 kb on - strand, within MPMX19_05218at 744.717 kb on - strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.731 kb on + strand, within MPMX19_05218at 744.732 kb on - strand, within MPMX19_05218at 744.732 kb on - strand, within MPMX19_05218at 744.732 kb on - strand, within MPMX19_05218at 744.782 kb on + strand, within MPMX19_05218at 744.782 kb on + strand, within MPMX19_05218at 744.782 kb on + strand, within MPMX19_05218at 744.783 kb on - strand, within MPMX19_05218at 744.783 kb on - strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.944 kb on + strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.945 kb on - strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.987 kb on + strand, within MPMX19_05218at 744.988 kb on - strand, within MPMX19_05218at 744.988 kb on - strand, within MPMX19_05218at 744.988 kb on - strand, within MPMX19_05218at 744.988 kb on - strand, within MPMX19_05218at 744.988 kb on - strand, within MPMX19_05218at 744.988 kb on - strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.989 kb on + strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 744.990 kb on - strand, within MPMX19_05218at 745.058 kb on + strand, within MPMX19_05218at 745.058 kb on + strand, within MPMX19_05218at 745.059 kb on - strand, within MPMX19_05218at 745.059 kb on - strand, within MPMX19_05218at 745.059 kb on - strand, within MPMX19_05218at 745.059 kb on - strand, within MPMX19_05218at 745.059 kb on - strand, within MPMX19_05218at 745.059 kb on - strand, within MPMX19_05218at 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.128 kb on + strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.129 kb on - strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.130 kb on + strandat 745.131 kb on - strandat 745.131 kb on - strandat 745.131 kb on - strandat 745.131 kb on - strandat 745.131 kb on - strandat 745.131 kb on - strandat 745.131 kb on - strandat 745.131 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1
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742,345 - MPMX19_05216 0.52 -1.4
742,345 - MPMX19_05216 0.52 +1.2
742,345 - MPMX19_05216 0.52 -0.4
742,345 - MPMX19_05216 0.52 +0.3
742,345 - MPMX19_05216 0.52 -0.1
742,345 - MPMX19_05216 0.52 -0.6
742,563 + MPMX19_05216 0.65 -0.8
742,563 + MPMX19_05216 0.65 +0.2
742,563 + MPMX19_05216 0.65 -0.1
742,563 + MPMX19_05216 0.65 +2.2
742,563 + MPMX19_05216 0.65 -0.7
742,563 + MPMX19_05216 0.65 +0.2
742,563 + MPMX19_05216 0.65 -0.6
742,563 + MPMX19_05216 0.65 +0.1
742,563 + MPMX19_05216 0.65 -1.3
742,563 + MPMX19_05216 0.65 -0.5
742,563 + MPMX19_05216 0.65 +0.5
742,563 + MPMX19_05216 0.65 -1.1
742,563 + MPMX19_05216 0.65 -2.3
742,563 + MPMX19_05216 0.65 -0.5
742,564 - MPMX19_05216 0.65 -1.4
742,564 - MPMX19_05216 0.65 +0.5
742,564 - MPMX19_05216 0.65 -0.1
742,564 - MPMX19_05216 0.65 -0.3
742,564 - MPMX19_05216 0.65 -0.6
742,564 - MPMX19_05216 0.65 -0.4
742,719 + MPMX19_05216 0.74 +0.1
742,800 + MPMX19_05216 0.79 -0.3
742,800 + MPMX19_05216 0.79 +0.5
742,800 + MPMX19_05216 0.79 -0.4
742,800 + MPMX19_05216 0.79 -1.4
742,801 - MPMX19_05216 0.79 +0.0
742,801 - MPMX19_05216 0.79 -1.0
742,860 + MPMX19_05216 0.82 -1.7
742,860 + MPMX19_05216 0.82 +0.5
742,860 + MPMX19_05216 0.82 +0.2
742,860 + MPMX19_05216 0.82 -0.1
742,860 + MPMX19_05216 0.82 -0.1
742,861 - MPMX19_05216 0.82 +2.2
742,861 - MPMX19_05216 0.82 -1.1
742,861 - MPMX19_05216 0.82 +2.2
742,861 - MPMX19_05216 0.82 -0.6
742,969 + MPMX19_05216 0.89 -1.7
742,969 + MPMX19_05216 0.89 +0.5
742,971 + MPMX19_05216 0.89 -1.1
742,971 + MPMX19_05216 0.89 +0.2
742,971 + MPMX19_05216 0.89 +0.5
742,971 + MPMX19_05216 0.89 +0.2
742,972 - MPMX19_05216 0.89 -1.5
742,972 - MPMX19_05216 0.89 -0.7
742,972 - MPMX19_05216 0.89 -1.3
742,972 - MPMX19_05216 0.89 -1.4
742,972 - MPMX19_05216 0.89 -0.1
742,972 - MPMX19_05216 0.89 +0.2
742,972 - MPMX19_05216 0.89 +0.9
743,068 - +0.6
743,109 + -0.5
743,109 + -0.7
743,821 + MPMX19_05217 0.60 -1.1
743,822 - MPMX19_05217 0.60 -1.3
744,103 + -0.6
744,103 + +0.6
744,103 + -0.0
744,104 - -2.2
744,104 - -1.1
744,278 + -1.8
744,278 + -0.0
744,278 + -0.4
744,279 - +0.0
744,279 - +0.0
744,279 - -1.7
744,279 - -1.3
744,279 - -0.6
744,279 - +0.5
744,279 - -1.8
744,632 + MPMX19_05218 0.40 -1.7
744,632 + MPMX19_05218 0.40 +0.4
744,633 - MPMX19_05218 0.40 +0.1
744,633 - MPMX19_05218 0.40 +0.0
744,633 - MPMX19_05218 0.40 -2.2
744,689 + MPMX19_05218 0.46 +0.0
744,690 - MPMX19_05218 0.46 -1.5
744,690 - MPMX19_05218 0.46 +0.7
744,690 - MPMX19_05218 0.46 -1.0
744,716 + MPMX19_05218 0.49 -0.2
744,716 + MPMX19_05218 0.49 +0.6
744,717 - MPMX19_05218 0.49 -0.3
744,717 - MPMX19_05218 0.49 -0.9
744,717 - MPMX19_05218 0.49 -1.0
744,717 - MPMX19_05218 0.49 +0.3
744,731 + MPMX19_05218 0.51 -0.4
744,731 + MPMX19_05218 0.51 +0.1
744,731 + MPMX19_05218 0.51 -0.3
744,731 + MPMX19_05218 0.51 -1.3
744,731 + MPMX19_05218 0.51 +1.1
744,731 + MPMX19_05218 0.51 -1.3
744,731 + MPMX19_05218 0.51 -0.7
744,731 + MPMX19_05218 0.51 -0.6
744,731 + MPMX19_05218 0.51 -0.1
744,732 - MPMX19_05218 0.51 +1.1
744,732 - MPMX19_05218 0.51 +1.2
744,732 - MPMX19_05218 0.51 -0.0
744,782 + MPMX19_05218 0.56 -0.7
744,782 + MPMX19_05218 0.56 +0.8
744,782 + MPMX19_05218 0.56 +0.1
744,783 - MPMX19_05218 0.57 -0.8
744,783 - MPMX19_05218 0.57 +0.6
744,944 + MPMX19_05218 0.74 -0.8
744,944 + MPMX19_05218 0.74 +0.9
744,944 + MPMX19_05218 0.74 +0.1
744,944 + MPMX19_05218 0.74 +0.2
744,944 + MPMX19_05218 0.74 +0.5
744,944 + MPMX19_05218 0.74 -1.1
744,944 + MPMX19_05218 0.74 +0.7
744,944 + MPMX19_05218 0.74 -1.8
744,944 + MPMX19_05218 0.74 -1.2
744,944 + MPMX19_05218 0.74 +1.5
744,944 + MPMX19_05218 0.74 -0.2
744,944 + MPMX19_05218 0.74 -1.8
744,944 + MPMX19_05218 0.74 -0.8
744,944 + MPMX19_05218 0.74 -0.7
744,944 + MPMX19_05218 0.74 +0.1
744,944 + MPMX19_05218 0.74 +0.7
744,945 - MPMX19_05218 0.74 -2.1
744,945 - MPMX19_05218 0.74 -0.4
744,945 - MPMX19_05218 0.74 +0.9
744,945 - MPMX19_05218 0.74 +0.3
744,945 - MPMX19_05218 0.74 -0.7
744,945 - MPMX19_05218 0.74 -0.5
744,945 - MPMX19_05218 0.74 +1.5
744,945 - MPMX19_05218 0.74 -1.2
744,945 - MPMX19_05218 0.74 -1.8
744,945 - MPMX19_05218 0.74 +1.3
744,945 - MPMX19_05218 0.74 -1.1
744,945 - MPMX19_05218 0.74 +0.2
744,945 - MPMX19_05218 0.74 -0.1
744,945 - MPMX19_05218 0.74 +0.4
744,945 - MPMX19_05218 0.74 -0.8
744,945 - MPMX19_05218 0.74 -2.1
744,945 - MPMX19_05218 0.74 -0.4
744,987 + MPMX19_05218 0.79 +0.9
744,987 + MPMX19_05218 0.79 -1.0
744,987 + MPMX19_05218 0.79 -0.4
744,987 + MPMX19_05218 0.79 -1.3
744,987 + MPMX19_05218 0.79 +0.2
744,987 + MPMX19_05218 0.79 -1.1
744,987 + MPMX19_05218 0.79 +0.9
744,987 + MPMX19_05218 0.79 +0.2
744,988 - MPMX19_05218 0.79 +0.5
744,988 - MPMX19_05218 0.79 -0.8
744,988 - MPMX19_05218 0.79 -1.7
744,988 - MPMX19_05218 0.79 -0.4
744,988 - MPMX19_05218 0.79 -0.4
744,988 - MPMX19_05218 0.79 -0.3
744,989 + MPMX19_05218 0.79 -1.7
744,989 + MPMX19_05218 0.79 -0.1
744,989 + MPMX19_05218 0.79 +0.1
744,989 + MPMX19_05218 0.79 -0.1
744,989 + MPMX19_05218 0.79 -2.0
744,989 + MPMX19_05218 0.79 -0.7
744,989 + MPMX19_05218 0.79 +0.5
744,989 + MPMX19_05218 0.79 +0.1
744,989 + MPMX19_05218 0.79 -0.1
744,989 + MPMX19_05218 0.79 -1.0
744,989 + MPMX19_05218 0.79 +1.2
744,989 + MPMX19_05218 0.79 +1.9
744,989 + MPMX19_05218 0.79 -0.1
744,989 + MPMX19_05218 0.79 +0.0
744,989 + MPMX19_05218 0.79 -1.7
744,989 + MPMX19_05218 0.79 -0.2
744,989 + MPMX19_05218 0.79 -1.0
744,990 - MPMX19_05218 0.79 -0.4
744,990 - MPMX19_05218 0.79 +0.9
744,990 - MPMX19_05218 0.79 -0.3
744,990 - MPMX19_05218 0.79 -0.7
744,990 - MPMX19_05218 0.79 -1.5
744,990 - MPMX19_05218 0.79 -0.3
744,990 - MPMX19_05218 0.79 -1.5
744,990 - MPMX19_05218 0.79 -2.4
744,990 - MPMX19_05218 0.79 -0.1
744,990 - MPMX19_05218 0.79 +0.0
744,990 - MPMX19_05218 0.79 -1.3
744,990 - MPMX19_05218 0.79 -1.3
744,990 - MPMX19_05218 0.79 +0.3
744,990 - MPMX19_05218 0.79 +0.5
744,990 - MPMX19_05218 0.79 -0.1
744,990 - MPMX19_05218 0.79 +1.0
744,990 - MPMX19_05218 0.79 -0.1
744,990 - MPMX19_05218 0.79 +0.9
744,990 - MPMX19_05218 0.79 -0.6
745,058 + MPMX19_05218 0.87 -0.5
745,058 + MPMX19_05218 0.87 -1.0
745,059 - MPMX19_05218 0.87 +0.6
745,059 - MPMX19_05218 0.87 -1.2
745,059 - MPMX19_05218 0.87 -0.6
745,059 - MPMX19_05218 0.87 -1.7
745,059 - MPMX19_05218 0.87 -0.5
745,059 - MPMX19_05218 0.87 -1.0
745,128 + -0.5
745,128 + -0.5
745,128 + -2.3
745,128 + +0.3
745,128 + -1.7
745,128 + -0.3
745,128 + +0.8
745,128 + -1.1
745,128 + -0.2
745,128 + -0.0
745,128 + -0.6
745,128 + -0.9
745,128 + -0.3
745,128 + -1.8
745,128 + +0.2
745,128 + -2.7
745,129 - -1.8
745,129 - -0.1
745,129 - -0.4
745,129 - +0.8
745,129 - +0.3
745,129 - +0.1
745,129 - +1.3
745,129 - +0.9
745,129 - +0.3
745,129 - -1.9
745,129 - -1.4
745,130 + -1.0
745,130 + +0.5
745,130 + -0.8
745,130 + +0.5
745,130 + -0.0
745,130 + +0.6
745,130 + -0.3
745,130 + +0.3
745,130 + -0.3
745,130 + +0.4
745,130 + -0.2
745,130 + +0.9
745,130 + -0.0
745,130 + -0.7
745,130 + -0.5
745,130 + -0.4
745,130 + +0.1
745,131 - -0.1
745,131 - +0.8
745,131 - +0.6
745,131 - +0.9
745,131 - -0.5
745,131 - +0.9
745,131 - -0.3
745,131 - -0.8

Or see this region's nucleotide sequence