Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05194 and MPMX19_05195 overlap by 4 nucleotides MPMX19_05195 and MPMX19_05196 are separated by 57 nucleotides MPMX19_05196 and MPMX19_05197 are separated by 51 nucleotides
MPMX19_05194: MPMX19_05194 - Taurine import ATP-binding protein TauB, at 697,221 to 698,024
_05194
MPMX19_05195: MPMX19_05195 - Putative aliphatic sulfonates transport permease protein SsuC, at 698,021 to 698,872
_05195
MPMX19_05196: MPMX19_05196 - Alpha-ketoglutarate-dependent taurine dioxygenase, at 698,930 to 699,781
_05196
MPMX19_05197: MPMX19_05197 - Inducible ornithine decarboxylase, at 699,833 to 702,193
_05197
Position (kb) 698
699
700 Strain fitness (log2 ratio) -2
-1
0
1 at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.954 kb on - strand at 697.954 kb on - strand at 697.954 kb on - strand at 697.954 kb on - strand at 698.259 kb on - strand, within MPMX19_05195 at 698.259 kb on - strand, within MPMX19_05195 at 698.259 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.907 kb on + strand at 698.908 kb on - strand at 698.908 kb on - strand at 698.908 kb on - strand at 698.908 kb on - strand at 699.072 kb on + strand, within MPMX19_05196 at 699.072 kb on + strand, within MPMX19_05196 at 699.072 kb on + strand, within MPMX19_05196 at 699.072 kb on + strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.344 kb on + strand, within MPMX19_05196 at 699.344 kb on + strand, within MPMX19_05196 at 699.407 kb on - strand, within MPMX19_05196 at 699.617 kb on + strand, within MPMX19_05196 at 699.617 kb on + strand, within MPMX19_05196 at 699.618 kb on - strand, within MPMX19_05196 at 699.707 kb on + strand at 699.707 kb on + strand at 699.708 kb on - strand at 699.708 kb on - strand at 699.776 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.969 kb on + strand at 699.970 kb on - strand at 699.970 kb on - strand at 700.039 kb on - strand at 700.039 kb on - strand at 700.092 kb on + strand, within MPMX19_05197 at 700.092 kb on + strand, within MPMX19_05197 at 700.092 kb on + strand, within MPMX19_05197 at 700.092 kb on + strand, within MPMX19_05197 at 700.092 kb on + strand, within MPMX19_05197 at 700.092 kb on + strand, within MPMX19_05197 at 700.092 kb on + strand, within MPMX19_05197 at 700.092 kb on + strand, within MPMX19_05197 at 700.093 kb on - strand, within MPMX19_05197 at 700.093 kb on - strand, within MPMX19_05197 at 700.093 kb on - strand, within MPMX19_05197 at 700.209 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.212 kb on + strand, within MPMX19_05197 at 700.213 kb on - strand, within MPMX19_05197 at 700.213 kb on - strand, within MPMX19_05197 at 700.213 kb on - strand, within MPMX19_05197 at 700.213 kb on - strand, within MPMX19_05197 at 700.213 kb on - strand, within MPMX19_05197 at 700.213 kb on - strand, within MPMX19_05197 at 700.257 kb on + strand, within MPMX19_05197 at 700.449 kb on + strand, within MPMX19_05197 at 700.449 kb on + strand, within MPMX19_05197 at 700.449 kb on + strand, within MPMX19_05197 at 700.450 kb on - strand, within MPMX19_05197 at 700.450 kb on - strand, within MPMX19_05197 at 700.450 kb on - strand, within MPMX19_05197 at 700.450 kb on - strand, within MPMX19_05197 at 700.488 kb on + strand, within MPMX19_05197 at 700.488 kb on + strand, within MPMX19_05197 at 700.488 kb on + strand, within MPMX19_05197 at 700.488 kb on + strand, within MPMX19_05197 at 700.488 kb on + strand, within MPMX19_05197 at 700.488 kb on + strand, within MPMX19_05197 at 700.489 kb on - strand, within MPMX19_05197 at 700.489 kb on - strand, within MPMX19_05197 at 700.555 kb on - strand, within MPMX19_05197
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 697,953 + -0.3 697,953 + -1.8 697,953 + -1.0 697,953 + -0.4 697,953 + -0.5 697,953 + -0.2 697,954 - -0.0 697,954 - +1.2 697,954 - +0.2 697,954 - +0.1 698,259 - MPMX19_05195 0.28 +1.5 698,259 - MPMX19_05195 0.28 -1.0 698,259 - MPMX19_05195 0.28 -1.1 698,436 - MPMX19_05195 0.49 -0.7 698,436 - MPMX19_05195 0.49 -0.8 698,436 - MPMX19_05195 0.49 +1.2 698,436 - MPMX19_05195 0.49 -0.7 698,436 - MPMX19_05195 0.49 +0.3 698,436 - MPMX19_05195 0.49 -0.5 698,436 - MPMX19_05195 0.49 +0.1 698,436 - MPMX19_05195 0.49 -2.4 698,907 + -0.6 698,908 - -0.0 698,908 - -0.4 698,908 - -0.3 698,908 - -0.3 699,072 + MPMX19_05196 0.17 -0.3 699,072 + MPMX19_05196 0.17 +0.2 699,072 + MPMX19_05196 0.17 -0.5 699,072 + MPMX19_05196 0.17 -0.4 699,073 - MPMX19_05196 0.17 +0.7 699,073 - MPMX19_05196 0.17 -1.2 699,073 - MPMX19_05196 0.17 -1.5 699,073 - MPMX19_05196 0.17 +0.9 699,073 - MPMX19_05196 0.17 -0.7 699,344 + MPMX19_05196 0.49 -0.7 699,344 + MPMX19_05196 0.49 -0.1 699,407 - MPMX19_05196 0.56 +0.2 699,617 + MPMX19_05196 0.81 +0.3 699,617 + MPMX19_05196 0.81 +0.1 699,618 - MPMX19_05196 0.81 +0.5 699,707 + -0.6 699,707 + +0.2 699,708 - -1.4 699,708 - +0.5 699,776 + -0.7 699,861 + +1.3 699,861 + -1.4 699,861 + -1.5 699,861 + +0.1 699,861 + -0.7 699,861 + +0.9 699,861 + -0.3 699,861 + -1.3 699,861 + +0.7 699,861 + -0.1 699,861 + -1.0 699,861 + -1.0 699,861 + -0.8 699,861 + -0.2 699,861 + -0.5 699,861 + -0.7 699,861 + -0.2 699,861 + -0.7 699,861 + -0.3 699,861 + -0.5 699,861 + -0.5 699,861 + -0.9 699,861 + +0.2 699,861 + +0.8 699,861 + -0.4 699,861 + +0.3 699,861 + +0.0 699,862 - -0.1 699,862 - -0.3 699,862 - -0.8 699,862 - +0.3 699,862 - +0.2 699,862 - +0.7 699,862 - -0.6 699,862 - -0.1 699,862 - -0.1 699,862 - -0.8 699,862 - -1.5 699,862 - -0.5 699,862 - -1.0 699,862 - +0.7 699,862 - -0.0 699,862 - -0.8 699,867 + +0.2 699,867 + +0.5 699,867 + +0.3 699,867 + +0.7 699,867 + -0.1 699,867 + +0.1 699,868 - +0.2 699,868 - +0.3 699,868 - -0.8 699,868 - -0.0 699,868 - -0.5 699,868 - -0.1 699,969 + -0.5 699,970 - +0.1 699,970 - -0.5 700,039 - -0.4 700,039 - -0.7 700,092 + MPMX19_05197 0.11 -1.5 700,092 + MPMX19_05197 0.11 -2.0 700,092 + MPMX19_05197 0.11 +0.1 700,092 + MPMX19_05197 0.11 +0.3 700,092 + MPMX19_05197 0.11 -0.7 700,092 + MPMX19_05197 0.11 -0.3 700,092 + MPMX19_05197 0.11 -0.3 700,092 + MPMX19_05197 0.11 -0.1 700,093 - MPMX19_05197 0.11 -2.2 700,093 - MPMX19_05197 0.11 -0.1 700,093 - MPMX19_05197 0.11 -0.4 700,209 + MPMX19_05197 0.16 +0.9 700,212 + MPMX19_05197 0.16 -0.4 700,212 + MPMX19_05197 0.16 -0.5 700,212 + MPMX19_05197 0.16 -0.8 700,212 + MPMX19_05197 0.16 +0.1 700,212 + MPMX19_05197 0.16 -0.7 700,212 + MPMX19_05197 0.16 -0.7 700,212 + MPMX19_05197 0.16 -2.0 700,212 + MPMX19_05197 0.16 -0.5 700,213 - MPMX19_05197 0.16 +0.3 700,213 - MPMX19_05197 0.16 -0.0 700,213 - MPMX19_05197 0.16 -1.7 700,213 - MPMX19_05197 0.16 -0.8 700,213 - MPMX19_05197 0.16 -0.7 700,213 - MPMX19_05197 0.16 +1.3 700,257 + MPMX19_05197 0.18 -0.3 700,449 + MPMX19_05197 0.26 -0.3 700,449 + MPMX19_05197 0.26 +0.1 700,449 + MPMX19_05197 0.26 +0.0 700,450 - MPMX19_05197 0.26 +1.0 700,450 - MPMX19_05197 0.26 +0.6 700,450 - MPMX19_05197 0.26 +0.8 700,450 - MPMX19_05197 0.26 -1.5 700,488 + MPMX19_05197 0.28 -1.2 700,488 + MPMX19_05197 0.28 -0.5 700,488 + MPMX19_05197 0.28 +1.1 700,488 + MPMX19_05197 0.28 +0.4 700,488 + MPMX19_05197 0.28 +0.6 700,488 + MPMX19_05197 0.28 -1.1 700,489 - MPMX19_05197 0.28 -0.4 700,489 - MPMX19_05197 0.28 +1.2 700,555 - MPMX19_05197 0.31 +0.5
Or see this region's nucleotide sequence