Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04989 and MPMX19_04990 are separated by 101 nucleotides MPMX19_04990 and MPMX19_04991 are separated by 137 nucleotides
MPMX19_04989: MPMX19_04989 - K(+)/H(+) antiporter NhaP2, at 465,872 to 468,451
_04989
MPMX19_04990: MPMX19_04990 - Hydrogen peroxide-inducible genes activator, at 468,553 to 469,467
_04990
MPMX19_04991: MPMX19_04991 - hypothetical protein, at 469,605 to 470,228
_04991
Position (kb) 468
469
470 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.631 kb on + strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.632 kb on - strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.649 kb on + strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.650 kb on - strand, within MPMX19_04989 at 467.658 kb on + strand, within MPMX19_04989 at 467.658 kb on + strand, within MPMX19_04989 at 467.658 kb on + strand, within MPMX19_04989 at 467.659 kb on - strand, within MPMX19_04989 at 467.659 kb on - strand, within MPMX19_04989 at 467.659 kb on - strand, within MPMX19_04989 at 467.659 kb on - strand, within MPMX19_04989 at 467.659 kb on - strand, within MPMX19_04989 at 467.745 kb on + strand, within MPMX19_04989 at 467.745 kb on + strand, within MPMX19_04989 at 467.745 kb on + strand, within MPMX19_04989 at 467.745 kb on + strand, within MPMX19_04989 at 467.745 kb on + strand, within MPMX19_04989 at 467.746 kb on - strand, within MPMX19_04989 at 467.746 kb on - strand, within MPMX19_04989 at 467.746 kb on - strand, within MPMX19_04989 at 467.746 kb on - strand, within MPMX19_04989 at 468.027 kb on + strand, within MPMX19_04989 at 468.027 kb on + strand, within MPMX19_04989 at 468.027 kb on + strand, within MPMX19_04989 at 468.028 kb on - strand, within MPMX19_04989 at 468.291 kb on + strand at 468.291 kb on + strand at 468.291 kb on + strand at 468.291 kb on + strand at 468.291 kb on + strand at 468.292 kb on - strand at 468.292 kb on - strand at 468.292 kb on - strand at 468.292 kb on - strand at 468.292 kb on - strand at 468.514 kb on - strand at 468.528 kb on + strand at 468.528 kb on + strand at 468.528 kb on + strand at 468.528 kb on + strand at 468.528 kb on + strand at 468.528 kb on + strand at 468.528 kb on + strand at 468.528 kb on + strand at 468.529 kb on - strand at 468.529 kb on - strand at 468.529 kb on - strand at 468.529 kb on - strand at 468.529 kb on - strand at 468.529 kb on - strand at 468.529 kb on - strand at 468.529 kb on - strand at 468.753 kb on + strand, within MPMX19_04990 at 468.753 kb on + strand, within MPMX19_04990 at 468.753 kb on + strand, within MPMX19_04990 at 468.753 kb on + strand, within MPMX19_04990 at 468.753 kb on + strand, within MPMX19_04990 at 468.753 kb on + strand, within MPMX19_04990 at 468.753 kb on + strand, within MPMX19_04990 at 468.754 kb on - strand, within MPMX19_04990 at 468.755 kb on + strand, within MPMX19_04990 at 468.756 kb on - strand, within MPMX19_04990 at 468.756 kb on - strand, within MPMX19_04990 at 469.891 kb on + strand, within MPMX19_04991 at 469.891 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.903 kb on + strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.904 kb on - strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.906 kb on + strand, within MPMX19_04991 at 469.907 kb on - strand, within MPMX19_04991 at 469.907 kb on - strand, within MPMX19_04991 at 469.907 kb on - strand, within MPMX19_04991 at 469.907 kb on - strand, within MPMX19_04991 at 469.907 kb on - strand, within MPMX19_04991 at 469.907 kb on - strand, within MPMX19_04991 at 469.907 kb on - strand, within MPMX19_04991 at 469.958 kb on - strand, within MPMX19_04991 at 469.958 kb on - strand, within MPMX19_04991 at 469.984 kb on + strand, within MPMX19_04991 at 469.984 kb on + strand, within MPMX19_04991 at 469.985 kb on - strand, within MPMX19_04991 at 470.007 kb on + strand, within MPMX19_04991 at 470.008 kb on - strand, within MPMX19_04991 at 470.008 kb on - strand, within MPMX19_04991 at 470.029 kb on + strand, within MPMX19_04991 at 470.029 kb on + strand, within MPMX19_04991 at 470.030 kb on - strand, within MPMX19_04991 at 470.030 kb on - strand, within MPMX19_04991 at 470.030 kb on - strand, within MPMX19_04991 at 470.030 kb on - strand, within MPMX19_04991 at 470.255 kb on + strand at 470.256 kb on - strand at 470.256 kb on - strand at 470.281 kb on + strand at 470.281 kb on + strand at 470.293 kb on + strand at 470.293 kb on + strand at 470.293 kb on + strand at 470.293 kb on + strand at 470.293 kb on + strand at 470.294 kb on - strand at 470.294 kb on - strand at 470.294 kb on - strand at 470.294 kb on - strand at 470.294 kb on - strand at 470.294 kb on - strand at 470.294 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 467,631 + MPMX19_04989 0.68 -0.3 467,631 + MPMX19_04989 0.68 -0.5 467,631 + MPMX19_04989 0.68 -1.5 467,631 + MPMX19_04989 0.68 -0.9 467,631 + MPMX19_04989 0.68 -1.0 467,631 + MPMX19_04989 0.68 -1.3 467,631 + MPMX19_04989 0.68 +1.5 467,631 + MPMX19_04989 0.68 -1.3 467,631 + MPMX19_04989 0.68 +0.3 467,631 + MPMX19_04989 0.68 -1.1 467,631 + MPMX19_04989 0.68 +0.1 467,631 + MPMX19_04989 0.68 +0.3 467,631 + MPMX19_04989 0.68 -0.3 467,632 - MPMX19_04989 0.68 -0.1 467,632 - MPMX19_04989 0.68 +0.1 467,632 - MPMX19_04989 0.68 -0.2 467,632 - MPMX19_04989 0.68 +1.0 467,632 - MPMX19_04989 0.68 -0.0 467,632 - MPMX19_04989 0.68 -1.8 467,632 - MPMX19_04989 0.68 +0.2 467,632 - MPMX19_04989 0.68 +0.8 467,632 - MPMX19_04989 0.68 +1.0 467,632 - MPMX19_04989 0.68 -0.6 467,632 - MPMX19_04989 0.68 -1.3 467,649 + MPMX19_04989 0.69 -0.5 467,649 + MPMX19_04989 0.69 -1.7 467,649 + MPMX19_04989 0.69 -0.5 467,649 + MPMX19_04989 0.69 +0.6 467,649 + MPMX19_04989 0.69 -0.5 467,649 + MPMX19_04989 0.69 -1.5 467,649 + MPMX19_04989 0.69 -0.6 467,649 + MPMX19_04989 0.69 -1.2 467,649 + MPMX19_04989 0.69 +0.2 467,649 + MPMX19_04989 0.69 -0.6 467,649 + MPMX19_04989 0.69 +0.5 467,649 + MPMX19_04989 0.69 +0.3 467,649 + MPMX19_04989 0.69 +0.1 467,649 + MPMX19_04989 0.69 -0.5 467,649 + MPMX19_04989 0.69 +0.8 467,649 + MPMX19_04989 0.69 -1.5 467,650 - MPMX19_04989 0.69 -0.2 467,650 - MPMX19_04989 0.69 -0.2 467,650 - MPMX19_04989 0.69 -0.8 467,650 - MPMX19_04989 0.69 +0.3 467,650 - MPMX19_04989 0.69 +0.3 467,650 - MPMX19_04989 0.69 -1.5 467,650 - MPMX19_04989 0.69 -0.7 467,650 - MPMX19_04989 0.69 -0.9 467,650 - MPMX19_04989 0.69 -0.6 467,650 - MPMX19_04989 0.69 +1.0 467,650 - MPMX19_04989 0.69 +0.1 467,650 - MPMX19_04989 0.69 -0.0 467,650 - MPMX19_04989 0.69 -0.6 467,650 - MPMX19_04989 0.69 +0.1 467,650 - MPMX19_04989 0.69 +1.5 467,650 - MPMX19_04989 0.69 +0.9 467,650 - MPMX19_04989 0.69 -1.3 467,650 - MPMX19_04989 0.69 -0.5 467,650 - MPMX19_04989 0.69 +0.0 467,650 - MPMX19_04989 0.69 -0.8 467,650 - MPMX19_04989 0.69 +1.5 467,650 - MPMX19_04989 0.69 -0.0 467,650 - MPMX19_04989 0.69 +0.7 467,650 - MPMX19_04989 0.69 +0.1 467,650 - MPMX19_04989 0.69 -0.2 467,650 - MPMX19_04989 0.69 +0.7 467,650 - MPMX19_04989 0.69 -0.9 467,650 - MPMX19_04989 0.69 -0.5 467,658 + MPMX19_04989 0.69 -1.8 467,658 + MPMX19_04989 0.69 -1.5 467,658 + MPMX19_04989 0.69 -1.6 467,659 - MPMX19_04989 0.69 -0.1 467,659 - MPMX19_04989 0.69 -0.0 467,659 - MPMX19_04989 0.69 -0.7 467,659 - MPMX19_04989 0.69 -1.0 467,659 - MPMX19_04989 0.69 -0.9 467,745 + MPMX19_04989 0.73 +0.2 467,745 + MPMX19_04989 0.73 -0.3 467,745 + MPMX19_04989 0.73 -1.7 467,745 + MPMX19_04989 0.73 -0.5 467,745 + MPMX19_04989 0.73 +1.4 467,746 - MPMX19_04989 0.73 -1.9 467,746 - MPMX19_04989 0.73 -2.2 467,746 - MPMX19_04989 0.73 +0.3 467,746 - MPMX19_04989 0.73 +1.4 468,027 + MPMX19_04989 0.84 -0.7 468,027 + MPMX19_04989 0.84 +0.4 468,027 + MPMX19_04989 0.84 +1.0 468,028 - MPMX19_04989 0.84 +0.3 468,291 + -0.1 468,291 + +0.5 468,291 + +0.4 468,291 + +1.2 468,291 + -1.0 468,292 - +0.8 468,292 - +1.1 468,292 - +1.8 468,292 - -1.4 468,292 - +0.2 468,514 - -0.0 468,528 + -2.0 468,528 + +0.5 468,528 + -0.3 468,528 + -1.1 468,528 + -1.5 468,528 + -0.0 468,528 + -1.2 468,528 + -1.8 468,529 - -1.3 468,529 - -0.3 468,529 - -0.3 468,529 - +0.7 468,529 - -0.7 468,529 - +0.5 468,529 - -1.5 468,529 - -0.0 468,753 + MPMX19_04990 0.22 -0.3 468,753 + MPMX19_04990 0.22 -1.3 468,753 + MPMX19_04990 0.22 -1.6 468,753 + MPMX19_04990 0.22 -0.8 468,753 + MPMX19_04990 0.22 -0.0 468,753 + MPMX19_04990 0.22 -1.8 468,753 + MPMX19_04990 0.22 +0.3 468,754 - MPMX19_04990 0.22 -0.2 468,755 + MPMX19_04990 0.22 +0.4 468,756 - MPMX19_04990 0.22 -1.0 468,756 - MPMX19_04990 0.22 -0.1 469,891 + MPMX19_04991 0.46 -0.0 469,891 + MPMX19_04991 0.46 -0.0 469,903 + MPMX19_04991 0.48 +1.1 469,903 + MPMX19_04991 0.48 +0.3 469,903 + MPMX19_04991 0.48 +0.5 469,903 + MPMX19_04991 0.48 -0.6 469,903 + MPMX19_04991 0.48 -0.5 469,903 + MPMX19_04991 0.48 +0.5 469,903 + MPMX19_04991 0.48 -0.3 469,903 + MPMX19_04991 0.48 -1.0 469,903 + MPMX19_04991 0.48 +0.5 469,903 + MPMX19_04991 0.48 +0.4 469,903 + MPMX19_04991 0.48 +0.5 469,903 + MPMX19_04991 0.48 +0.5 469,903 + MPMX19_04991 0.48 -1.2 469,903 + MPMX19_04991 0.48 +0.3 469,903 + MPMX19_04991 0.48 -1.6 469,903 + MPMX19_04991 0.48 -1.0 469,903 + MPMX19_04991 0.48 +1.0 469,904 - MPMX19_04991 0.48 -0.3 469,904 - MPMX19_04991 0.48 +0.5 469,904 - MPMX19_04991 0.48 +0.5 469,904 - MPMX19_04991 0.48 -0.3 469,904 - MPMX19_04991 0.48 -0.2 469,904 - MPMX19_04991 0.48 -0.3 469,904 - MPMX19_04991 0.48 +0.5 469,904 - MPMX19_04991 0.48 -2.3 469,904 - MPMX19_04991 0.48 -3.1 469,904 - MPMX19_04991 0.48 +0.5 469,904 - MPMX19_04991 0.48 +0.8 469,904 - MPMX19_04991 0.48 +0.4 469,904 - MPMX19_04991 0.48 -0.4 469,904 - MPMX19_04991 0.48 -0.3 469,904 - MPMX19_04991 0.48 -0.8 469,904 - MPMX19_04991 0.48 -1.3 469,904 - MPMX19_04991 0.48 +0.3 469,904 - MPMX19_04991 0.48 -1.7 469,904 - MPMX19_04991 0.48 -1.8 469,904 - MPMX19_04991 0.48 +0.5 469,904 - MPMX19_04991 0.48 -1.9 469,904 - MPMX19_04991 0.48 -0.0 469,904 - MPMX19_04991 0.48 -0.5 469,904 - MPMX19_04991 0.48 +0.1 469,904 - MPMX19_04991 0.48 -0.3 469,904 - MPMX19_04991 0.48 -1.5 469,904 - MPMX19_04991 0.48 +1.0 469,906 + MPMX19_04991 0.48 -0.8 469,906 + MPMX19_04991 0.48 +0.3 469,906 + MPMX19_04991 0.48 -0.6 469,906 + MPMX19_04991 0.48 -2.1 469,906 + MPMX19_04991 0.48 -1.3 469,906 + MPMX19_04991 0.48 +0.2 469,906 + MPMX19_04991 0.48 -0.8 469,906 + MPMX19_04991 0.48 -1.8 469,906 + MPMX19_04991 0.48 +0.1 469,906 + MPMX19_04991 0.48 -0.9 469,906 + MPMX19_04991 0.48 +0.4 469,906 + MPMX19_04991 0.48 -0.2 469,906 + MPMX19_04991 0.48 -1.3 469,906 + MPMX19_04991 0.48 +1.1 469,906 + MPMX19_04991 0.48 -1.4 469,906 + MPMX19_04991 0.48 -0.2 469,906 + MPMX19_04991 0.48 +0.5 469,907 - MPMX19_04991 0.48 +0.4 469,907 - MPMX19_04991 0.48 +0.4 469,907 - MPMX19_04991 0.48 -2.0 469,907 - MPMX19_04991 0.48 -1.1 469,907 - MPMX19_04991 0.48 +0.1 469,907 - MPMX19_04991 0.48 +0.3 469,907 - MPMX19_04991 0.48 +0.2 469,958 - MPMX19_04991 0.57 +0.4 469,958 - MPMX19_04991 0.57 -2.2 469,984 + MPMX19_04991 0.61 -1.0 469,984 + MPMX19_04991 0.61 -2.5 469,985 - MPMX19_04991 0.61 -1.0 470,007 + MPMX19_04991 0.64 +1.3 470,008 - MPMX19_04991 0.65 -1.7 470,008 - MPMX19_04991 0.65 -0.0 470,029 + MPMX19_04991 0.68 -1.3 470,029 + MPMX19_04991 0.68 -0.0 470,030 - MPMX19_04991 0.68 -0.2 470,030 - MPMX19_04991 0.68 -1.5 470,030 - MPMX19_04991 0.68 -2.6 470,030 - MPMX19_04991 0.68 -0.0 470,255 + -0.6 470,256 - +1.1 470,256 - -1.0 470,281 + -0.7 470,281 + -0.0 470,293 + +0.3 470,293 + +0.1 470,293 + +1.0 470,293 + -2.0 470,293 + -0.2 470,294 - +0.4 470,294 - -0.5 470,294 - +0.5 470,294 - -1.8 470,294 - -2.2 470,294 - -0.6 470,294 - -0.3
Or see this region's nucleotide sequence