Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04696

Experiment: NL-CCM, start OD=0.1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04695 and MPMX19_04696 overlap by 4 nucleotidesMPMX19_04696 and MPMX19_04697 overlap by 1 nucleotides MPMX19_04695: MPMX19_04695 - Na(+)/H(+) antiporter subunit D, at 79,240 to 80,868 _04695 MPMX19_04696: MPMX19_04696 - Na(+)/H(+) antiporter subunit C1, at 80,865 to 81,209 _04696 MPMX19_04697: MPMX19_04697 - NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic, at 81,209 to 84,175 _04697 Position (kb) 80 81 82Strain fitness (log2 ratio) -2 -1 0 1 2at 79.969 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.090 kb on + strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.091 kb on - strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.150 kb on + strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.151 kb on - strand, within MPMX19_04695at 80.312 kb on + strand, within MPMX19_04695at 80.312 kb on + strand, within MPMX19_04695at 80.312 kb on + strand, within MPMX19_04695at 80.312 kb on + strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.313 kb on - strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.369 kb on + strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.370 kb on - strand, within MPMX19_04695at 80.423 kb on + strand, within MPMX19_04695at 80.423 kb on + strand, within MPMX19_04695at 80.423 kb on + strand, within MPMX19_04695at 80.423 kb on + strand, within MPMX19_04695at 80.423 kb on + strand, within MPMX19_04695at 80.423 kb on + strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 80.424 kb on - strand, within MPMX19_04695at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.100 kb on + strand, within MPMX19_04696at 81.101 kb on - strand, within MPMX19_04696at 81.101 kb on - strand, within MPMX19_04696at 81.101 kb on - strand, within MPMX19_04696at 81.432 kb on + strandat 81.433 kb on - strandat 81.441 kb on + strandat 81.441 kb on + strandat 81.441 kb on + strandat 81.441 kb on + strandat 81.441 kb on + strandat 81.441 kb on + strandat 81.442 kb on - strandat 81.442 kb on - strandat 81.442 kb on - strandat 81.442 kb on - strandat 81.573 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.576 kb on + strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.577 kb on - strand, within MPMX19_04697at 81.843 kb on + strand, within MPMX19_04697at 81.843 kb on + strand, within MPMX19_04697at 81.843 kb on + strand, within MPMX19_04697at 81.844 kb on - strand, within MPMX19_04697at 81.951 kb on + strand, within MPMX19_04697at 81.952 kb on - strand, within MPMX19_04697

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1
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79,969 + MPMX19_04695 0.45 +0.1
80,090 + MPMX19_04695 0.52 +0.7
80,090 + MPMX19_04695 0.52 -1.1
80,090 + MPMX19_04695 0.52 +0.7
80,090 + MPMX19_04695 0.52 -0.1
80,090 + MPMX19_04695 0.52 -0.5
80,090 + MPMX19_04695 0.52 -1.6
80,090 + MPMX19_04695 0.52 -0.2
80,090 + MPMX19_04695 0.52 +2.1
80,090 + MPMX19_04695 0.52 -0.5
80,090 + MPMX19_04695 0.52 +0.1
80,090 + MPMX19_04695 0.52 +0.2
80,090 + MPMX19_04695 0.52 +0.3
80,090 + MPMX19_04695 0.52 -0.3
80,090 + MPMX19_04695 0.52 -0.3
80,090 + MPMX19_04695 0.52 -0.2
80,090 + MPMX19_04695 0.52 +0.7
80,090 + MPMX19_04695 0.52 -0.4
80,090 + MPMX19_04695 0.52 -1.4
80,090 + MPMX19_04695 0.52 +0.8
80,090 + MPMX19_04695 0.52 -0.3
80,090 + MPMX19_04695 0.52 -0.1
80,091 - MPMX19_04695 0.52 -0.4
80,091 - MPMX19_04695 0.52 -0.1
80,091 - MPMX19_04695 0.52 +0.8
80,091 - MPMX19_04695 0.52 -0.7
80,091 - MPMX19_04695 0.52 +0.2
80,091 - MPMX19_04695 0.52 +0.6
80,091 - MPMX19_04695 0.52 -0.2
80,091 - MPMX19_04695 0.52 +0.7
80,091 - MPMX19_04695 0.52 -0.3
80,091 - MPMX19_04695 0.52 -0.3
80,091 - MPMX19_04695 0.52 -0.7
80,091 - MPMX19_04695 0.52 +0.5
80,091 - MPMX19_04695 0.52 -0.9
80,091 - MPMX19_04695 0.52 +0.4
80,091 - MPMX19_04695 0.52 -0.4
80,091 - MPMX19_04695 0.52 +0.3
80,150 + MPMX19_04695 0.56 -1.1
80,150 + MPMX19_04695 0.56 +0.3
80,150 + MPMX19_04695 0.56 -0.1
80,150 + MPMX19_04695 0.56 -1.5
80,150 + MPMX19_04695 0.56 +0.5
80,150 + MPMX19_04695 0.56 +0.3
80,150 + MPMX19_04695 0.56 -0.6
80,150 + MPMX19_04695 0.56 -1.1
80,150 + MPMX19_04695 0.56 +0.2
80,150 + MPMX19_04695 0.56 +0.7
80,150 + MPMX19_04695 0.56 -0.4
80,151 - MPMX19_04695 0.56 -1.2
80,151 - MPMX19_04695 0.56 +1.0
80,151 - MPMX19_04695 0.56 +1.1
80,151 - MPMX19_04695 0.56 -0.3
80,151 - MPMX19_04695 0.56 -1.0
80,151 - MPMX19_04695 0.56 +0.3
80,151 - MPMX19_04695 0.56 +0.5
80,151 - MPMX19_04695 0.56 -0.5
80,151 - MPMX19_04695 0.56 -1.3
80,312 + MPMX19_04695 0.66 -0.7
80,312 + MPMX19_04695 0.66 +0.3
80,312 + MPMX19_04695 0.66 +0.1
80,312 + MPMX19_04695 0.66 -0.4
80,313 - MPMX19_04695 0.66 +0.3
80,313 - MPMX19_04695 0.66 -1.2
80,313 - MPMX19_04695 0.66 -0.2
80,313 - MPMX19_04695 0.66 +0.1
80,313 - MPMX19_04695 0.66 +1.7
80,313 - MPMX19_04695 0.66 +0.0
80,313 - MPMX19_04695 0.66 +0.5
80,313 - MPMX19_04695 0.66 +0.5
80,313 - MPMX19_04695 0.66 -0.3
80,313 - MPMX19_04695 0.66 +0.2
80,369 + MPMX19_04695 0.69 +0.9
80,369 + MPMX19_04695 0.69 +0.1
80,369 + MPMX19_04695 0.69 -0.5
80,369 + MPMX19_04695 0.69 -0.6
80,369 + MPMX19_04695 0.69 +0.3
80,369 + MPMX19_04695 0.69 -1.1
80,369 + MPMX19_04695 0.69 -0.0
80,369 + MPMX19_04695 0.69 -0.8
80,369 + MPMX19_04695 0.69 -0.5
80,369 + MPMX19_04695 0.69 -2.6
80,369 + MPMX19_04695 0.69 +0.9
80,369 + MPMX19_04695 0.69 +0.3
80,369 + MPMX19_04695 0.69 +1.0
80,370 - MPMX19_04695 0.69 -1.1
80,370 - MPMX19_04695 0.69 -1.3
80,370 - MPMX19_04695 0.69 +0.4
80,370 - MPMX19_04695 0.69 -1.2
80,370 - MPMX19_04695 0.69 -1.3
80,370 - MPMX19_04695 0.69 +0.1
80,370 - MPMX19_04695 0.69 -0.5
80,370 - MPMX19_04695 0.69 -1.4
80,370 - MPMX19_04695 0.69 -0.1
80,370 - MPMX19_04695 0.69 +0.2
80,370 - MPMX19_04695 0.69 -1.4
80,370 - MPMX19_04695 0.69 +0.1
80,370 - MPMX19_04695 0.69 -1.2
80,370 - MPMX19_04695 0.69 +0.7
80,423 + MPMX19_04695 0.73 -0.7
80,423 + MPMX19_04695 0.73 +0.4
80,423 + MPMX19_04695 0.73 +0.7
80,423 + MPMX19_04695 0.73 -1.0
80,423 + MPMX19_04695 0.73 +0.6
80,423 + MPMX19_04695 0.73 +0.9
80,424 - MPMX19_04695 0.73 +0.1
80,424 - MPMX19_04695 0.73 +0.3
80,424 - MPMX19_04695 0.73 -0.7
80,424 - MPMX19_04695 0.73 +0.2
80,424 - MPMX19_04695 0.73 -1.0
80,424 - MPMX19_04695 0.73 +0.6
80,424 - MPMX19_04695 0.73 +0.5
80,424 - MPMX19_04695 0.73 -0.5
80,424 - MPMX19_04695 0.73 +0.0
80,424 - MPMX19_04695 0.73 +0.5
80,424 - MPMX19_04695 0.73 -0.5
80,424 - MPMX19_04695 0.73 -0.1
81,100 + MPMX19_04696 0.68 -1.0
81,100 + MPMX19_04696 0.68 +1.2
81,100 + MPMX19_04696 0.68 +0.1
81,100 + MPMX19_04696 0.68 -1.3
81,100 + MPMX19_04696 0.68 -1.2
81,100 + MPMX19_04696 0.68 -1.2
81,100 + MPMX19_04696 0.68 -1.0
81,100 + MPMX19_04696 0.68 -0.6
81,100 + MPMX19_04696 0.68 +1.0
81,100 + MPMX19_04696 0.68 -1.1
81,101 - MPMX19_04696 0.68 -0.1
81,101 - MPMX19_04696 0.68 -0.1
81,101 - MPMX19_04696 0.68 -1.5
81,432 + -0.4
81,433 - -0.0
81,441 + +1.3
81,441 + -1.5
81,441 + +0.0
81,441 + -1.5
81,441 + +0.2
81,441 + +0.5
81,442 - -2.2
81,442 - -1.2
81,442 - -0.8
81,442 - -0.8
81,573 + MPMX19_04697 0.12 +0.8
81,576 + MPMX19_04697 0.12 -0.2
81,576 + MPMX19_04697 0.12 -0.3
81,576 + MPMX19_04697 0.12 +0.0
81,576 + MPMX19_04697 0.12 -0.0
81,576 + MPMX19_04697 0.12 +0.5
81,576 + MPMX19_04697 0.12 +0.0
81,576 + MPMX19_04697 0.12 -1.6
81,576 + MPMX19_04697 0.12 +0.8
81,576 + MPMX19_04697 0.12 -1.3
81,576 + MPMX19_04697 0.12 -2.5
81,576 + MPMX19_04697 0.12 -0.0
81,576 + MPMX19_04697 0.12 -0.1
81,576 + MPMX19_04697 0.12 -1.5
81,576 + MPMX19_04697 0.12 -0.1
81,576 + MPMX19_04697 0.12 -0.8
81,576 + MPMX19_04697 0.12 +0.5
81,576 + MPMX19_04697 0.12 +0.5
81,576 + MPMX19_04697 0.12 -0.5
81,576 + MPMX19_04697 0.12 -1.9
81,576 + MPMX19_04697 0.12 -0.1
81,576 + MPMX19_04697 0.12 -0.3
81,576 + MPMX19_04697 0.12 +0.3
81,576 + MPMX19_04697 0.12 +0.2
81,576 + MPMX19_04697 0.12 -0.5
81,576 + MPMX19_04697 0.12 -0.1
81,577 - MPMX19_04697 0.12 -0.5
81,577 - MPMX19_04697 0.12 -1.1
81,577 - MPMX19_04697 0.12 +0.1
81,577 - MPMX19_04697 0.12 +0.3
81,577 - MPMX19_04697 0.12 -1.3
81,577 - MPMX19_04697 0.12 -0.3
81,577 - MPMX19_04697 0.12 -0.6
81,577 - MPMX19_04697 0.12 +0.0
81,577 - MPMX19_04697 0.12 +0.2
81,577 - MPMX19_04697 0.12 +0.1
81,577 - MPMX19_04697 0.12 -1.5
81,577 - MPMX19_04697 0.12 +1.7
81,577 - MPMX19_04697 0.12 -1.0
81,577 - MPMX19_04697 0.12 +0.3
81,577 - MPMX19_04697 0.12 -0.5
81,577 - MPMX19_04697 0.12 -0.2
81,577 - MPMX19_04697 0.12 +0.6
81,577 - MPMX19_04697 0.12 -0.4
81,577 - MPMX19_04697 0.12 +0.7
81,577 - MPMX19_04697 0.12 +0.5
81,577 - MPMX19_04697 0.12 -1.1
81,577 - MPMX19_04697 0.12 +0.2
81,577 - MPMX19_04697 0.12 -1.3
81,577 - MPMX19_04697 0.12 -1.5
81,577 - MPMX19_04697 0.12 -0.5
81,577 - MPMX19_04697 0.12 -1.2
81,577 - MPMX19_04697 0.12 -0.7
81,577 - MPMX19_04697 0.12 +0.5
81,577 - MPMX19_04697 0.12 -1.1
81,577 - MPMX19_04697 0.12 -0.5
81,843 + MPMX19_04697 0.21 +0.1
81,843 + MPMX19_04697 0.21 -1.5
81,843 + MPMX19_04697 0.21 -0.1
81,844 - MPMX19_04697 0.21 +0.2
81,951 + MPMX19_04697 0.25 -1.5
81,952 - MPMX19_04697 0.25 -0.1

Or see this region's nucleotide sequence