Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04647

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
30,119	+		MPMX19_04646	0.14	+0.9
30,119	+		MPMX19_04646	0.14	-2.0
30,119	+		MPMX19_04646	0.14	+0.5
30,119	+		MPMX19_04646	0.14	-0.2
30,120	-		MPMX19_04646	0.14	-0.1
30,120	-		MPMX19_04646	0.14	+0.5
30,120	-		MPMX19_04646	0.14	+0.5
30,120	-		MPMX19_04646	0.14	-1.7
30,120	-		MPMX19_04646	0.14	-0.1
30,128	+		MPMX19_04646	0.15	-0.5
30,128	+		MPMX19_04646	0.15	+0.9
30,128	+		MPMX19_04646	0.15	-1.7
30,129	-		MPMX19_04646	0.15	-0.3
30,129	-		MPMX19_04646	0.15	-0.1
30,129	-		MPMX19_04646	0.15	+0.8
30,129	-		MPMX19_04646	0.15	+0.7
30,129	-		MPMX19_04646	0.15	-0.1
30,185	+		MPMX19_04646	0.22	-1.1
30,185	+		MPMX19_04646	0.22	-0.0
30,185	+		MPMX19_04646	0.22	+0.3
30,185	+		MPMX19_04646	0.22	+0.7
30,185	+		MPMX19_04646	0.22	-0.7
30,185	+		MPMX19_04646	0.22	-1.5
30,185	+		MPMX19_04646	0.22	-0.3
30,185	+		MPMX19_04646	0.22	+0.5
30,185	+		MPMX19_04646	0.22	-0.5
30,185	+		MPMX19_04646	0.22	-1.0
30,185	+		MPMX19_04646	0.22	-0.5
30,185	+		MPMX19_04646	0.22	-0.0
30,185	+		MPMX19_04646	0.22	-1.3
30,185	+		MPMX19_04646	0.22	-1.8
30,185	+		MPMX19_04646	0.22	-0.5
30,185	+		MPMX19_04646	0.22	-0.5
30,185	+		MPMX19_04646	0.22	+0.1
30,185	+		MPMX19_04646	0.22	-0.1
30,185	+		MPMX19_04646	0.22	-0.4
30,185	+		MPMX19_04646	0.22	-0.7
30,185	+		MPMX19_04646	0.22	+1.1
30,185	+		MPMX19_04646	0.22	+0.6
30,185	+		MPMX19_04646	0.22	+0.5
30,185	+		MPMX19_04646	0.22	+0.3
30,185	+		MPMX19_04646	0.22	-0.3
30,186	-		MPMX19_04646	0.22	-0.8
30,186	-		MPMX19_04646	0.22	+0.2
30,186	-		MPMX19_04646	0.22	+0.6
30,186	-		MPMX19_04646	0.22	-1.3
30,186	-		MPMX19_04646	0.22	+0.3
30,186	-		MPMX19_04646	0.22	+0.6
30,186	-		MPMX19_04646	0.22	-1.3
30,186	-		MPMX19_04646	0.22	-2.2
30,186	-		MPMX19_04646	0.22	+1.5
30,186	-		MPMX19_04646	0.22	+1.0
30,186	-		MPMX19_04646	0.22	-0.2
30,186	-		MPMX19_04646	0.22	+0.9
30,186	-		MPMX19_04646	0.22	+0.0
30,186	-		MPMX19_04646	0.22	-0.1
30,186	-		MPMX19_04646	0.22	-0.5
30,186	-		MPMX19_04646	0.22	-0.8
30,186	-		MPMX19_04646	0.22	+2.1
30,186	-		MPMX19_04646	0.22	-2.6
30,186	-		MPMX19_04646	0.22	-2.0
30,186	-		MPMX19_04646	0.22	-1.5
30,186	-		MPMX19_04646	0.22	+0.7
30,186	-		MPMX19_04646	0.22	-0.9
30,186	-		MPMX19_04646	0.22	+0.3
30,186	-		MPMX19_04646	0.22	-1.9
30,186	-		MPMX19_04646	0.22	+0.1
30,186	-		MPMX19_04646	0.22	-0.4
30,186	-		MPMX19_04646	0.22	-1.3
30,191	+		MPMX19_04646	0.22	-1.2
30,191	+		MPMX19_04646	0.22	-0.3
30,192	-		MPMX19_04646	0.22	-0.1
30,192	-		MPMX19_04646	0.22	-1.0
30,315	-		MPMX19_04646	0.36	+0.2
30,315	-		MPMX19_04646	0.36	+0.7
30,315	-		MPMX19_04646	0.36	+0.3
30,315	-		MPMX19_04646	0.36	+1.4
30,467	+		MPMX19_04646	0.52	-0.1
30,467	+		MPMX19_04646	0.52	-0.3
30,468	-		MPMX19_04646	0.52	+0.8
30,468	-		MPMX19_04646	0.52	+1.0
30,468	-		MPMX19_04646	0.52	-1.2
30,468	-		MPMX19_04646	0.52	-0.8
30,468	-		MPMX19_04646	0.52	-0.3
30,468	-		MPMX19_04646	0.52	-1.5
30,468	-		MPMX19_04646	0.52	-0.8
30,468	-		MPMX19_04646	0.52	-0.4
30,671	+		MPMX19_04646	0.75	+0.0
30,671	+		MPMX19_04646	0.75	-2.8
30,671	+		MPMX19_04646	0.75	+0.3
30,671	+		MPMX19_04646	0.75	+0.8
30,672	-		MPMX19_04646	0.75	+1.2
30,672	-		MPMX19_04646	0.75	+0.5
30,762	-		MPMX19_04646	0.84	-0.2
30,762	-		MPMX19_04646	0.84	+0.5
30,762	-		MPMX19_04646	0.84	+0.2
30,762	-		MPMX19_04646	0.84	-1.5
30,773	+		MPMX19_04646	0.86	+0.5
30,774	-		MPMX19_04646	0.86	+1.5
30,903	-				-1.7
31,011	+		MPMX19_04647	0.13	-1.8
31,011	+		MPMX19_04647	0.13	-1.1
31,011	+		MPMX19_04647	0.13	+0.1
31,011	+		MPMX19_04647	0.13	-0.5
31,011	+		MPMX19_04647	0.13	+0.2
31,011	+		MPMX19_04647	0.13	-0.8
31,011	+		MPMX19_04647	0.13	-1.5
31,012	-		MPMX19_04647	0.14	-0.7
31,069	+		MPMX19_04647	0.42	-0.2
31,070	-		MPMX19_04647	0.43	-1.3
31,222	+				-0.6
31,222	+				+0.9
31,222	+				-0.1
31,222	+				-1.3
31,223	-				-0.2
31,223	-				-0.7
31,223	-				+0.3
31,223	-				+0.2
31,223	-				+0.7
31,223	-				-1.4
31,224	+				-0.3
31,225	-				-2.1
31,225	-				-2.1
31,225	-				+0.1
31,227	+				+0.3
31,228	-				+0.6
31,274	+				+0.9
31,274	+				+0.3
31,274	+				+1.5
31,274	+				-0.5
31,274	+				+0.1
31,274	+				-0.7
31,274	+				-3.3
31,274	+				+0.1
31,274	+				+0.1
31,274	+				+0.5
31,274	+				+0.3
31,274	+				+0.2
31,274	+				+0.5
31,275	-				-1.3
31,275	-				-0.5
31,275	-				-2.0
31,275	-				-0.1
31,275	-				-0.1
31,275	-				-0.8
31,275	-				-0.7
31,275	-				+0.4
31,275	-				-0.5
31,275	-				+0.6
31,275	-				-1.0
31,279	+				-0.4
31,280	-				-0.2
31,286	+				-0.3
31,287	-				-0.7
31,298	+				-2.3
31,299	+				-1.5
31,299	+				+0.1
31,299	+				-0.7
31,299	+				-0.3
31,299	+				+0.3
31,299	+				-1.0
31,299	+				+0.4
31,299	+				-1.3
31,299	+				-0.3
31,299	+				+0.6
31,299	+				-0.5
31,299	+				-0.5
31,299	+				-0.6
31,300	-				-0.5
31,300	-				-0.4
31,300	-				+0.8
31,300	-				-1.1
31,300	-				-1.3
31,300	-				-1.4
31,300	-				-1.1
31,300	-				-0.5
31,300	-				+0.8
31,300	-				+0.2
31,300	-				-0.2
31,300	-				-0.1
31,300	-				-0.3
31,300	-				+0.8
31,300	-				-0.0
31,300	-				-1.7
31,300	-				+0.2
31,300	-				-1.8
31,345	-		MPMX19_04648	0.10	-0.5
31,398	+		MPMX19_04648	0.32	+0.3
31,398	+		MPMX19_04648	0.32	-0.3
31,398	+		MPMX19_04648	0.32	-1.0
31,398	+		MPMX19_04648	0.32	+0.5
31,399	-		MPMX19_04648	0.33	-0.6
31,399	-		MPMX19_04648	0.33	-0.0
31,399	-		MPMX19_04648	0.33	+0.5
31,399	-		MPMX19_04648	0.33	-1.1
31,399	-		MPMX19_04648	0.33	-1.5
31,501	-		MPMX19_04648	0.75	+1.5
31,581	-				-1.1
31,653	+				-0.3
31,653	+				-1.3
31,654	-				+0.9
31,654	-				-0.4
31,654	-				-0.7
31,654	-				-1.8
31,654	-				-2.1
31,863	+				+0.1
31,863	+				+0.0
31,863	+				+0.1
31,864	-				-0.8
31,864	-				+1.3
31,864	-				-0.6
31,864	-				-0.3
31,864	-				-0.8
31,864	-				-1.5
31,923	+				-0.0
31,923	+				-0.5
31,924	-				+0.3
31,924	-				+0.2
31,924	-				-0.1
31,924	-				+1.2
31,924	-				-0.4
31,924	-				-1.4
31,924	-				-0.6
31,925	+				-0.7
31,925	+				+1.0
31,925	+				-0.6
31,925	+				+0.3
31,925	+				-1.1
31,925	+				-1.0
31,926	-				-0.2
31,926	-				-0.1
31,954	-				+1.3
32,022	+		MPMX19_04649	0.10	-0.8
32,022	+		MPMX19_04649	0.10	-0.5
32,023	-		MPMX19_04649	0.10	-0.7
32,023	-		MPMX19_04649	0.10	-1.1
32,023	-		MPMX19_04649	0.10	+0.5
32,023	-		MPMX19_04649	0.10	-2.4
32,023	-		MPMX19_04649	0.10	+0.2
32,023	-		MPMX19_04649	0.10	-0.1
32,023	-		MPMX19_04649	0.10	-0.4
32,070	+		MPMX19_04649	0.12	-0.6
32,070	+		MPMX19_04649	0.12	+0.9
32,070	+		MPMX19_04649	0.12	-0.1
32,071	-		MPMX19_04649	0.12	-0.2
32,088	+		MPMX19_04649	0.12	-0.0
32,089	-		MPMX19_04649	0.12	-1.3
32,089	-		MPMX19_04649	0.12	-1.3
32,130	+		MPMX19_04649	0.14	+0.4
32,131	-		MPMX19_04649	0.14	-1.0
32,131	-		MPMX19_04649	0.14	-1.0
32,131	-		MPMX19_04649	0.14	-2.5
32,131	-		MPMX19_04649	0.14	+0.5
32,131	-		MPMX19_04649	0.14	+0.5
32,139	+		MPMX19_04649	0.14	-1.0
32,140	-		MPMX19_04649	0.14	-1.0
32,148	+		MPMX19_04649	0.14	+1.1
32,148	+		MPMX19_04649	0.14	+0.2
32,148	+		MPMX19_04649	0.14	+0.3
32,148	+		MPMX19_04649	0.14	-0.1
32,148	+		MPMX19_04649	0.14	-0.4
32,148	+		MPMX19_04649	0.14	-1.1
32,149	-		MPMX19_04649	0.14	+0.1
32,149	-		MPMX19_04649	0.14	-0.5
32,149	-		MPMX19_04649	0.14	-1.7