Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04634

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
10,690	+		MPMX19_04633	0.10	+0.5
10,691	-		MPMX19_04633	0.10	-1.8
10,875	+		MPMX19_04633	0.29	-0.8
10,875	+		MPMX19_04633	0.29	+0.3
10,875	+		MPMX19_04633	0.29	-0.5
10,876	-		MPMX19_04633	0.29	+0.7
10,876	-		MPMX19_04633	0.29	+0.5
10,876	-		MPMX19_04633	0.29	+0.3
10,876	-		MPMX19_04633	0.29	-1.2
10,896	+		MPMX19_04633	0.31	-1.0
10,897	-		MPMX19_04633	0.31	-0.5
11,279	-		MPMX19_04633	0.69	-0.1
11,279	-		MPMX19_04633	0.69	+0.8
11,651	+				-0.1
11,674	+				-0.1
11,674	+				+0.8
11,675	-				-0.8
11,675	-				-0.8
11,884	-		MPMX19_04634	0.19	-0.1
11,884	-		MPMX19_04634	0.19	+0.9
11,967	+		MPMX19_04634	0.25	-1.2
11,967	+		MPMX19_04634	0.25	+0.0
11,967	+		MPMX19_04634	0.25	+0.2
11,968	-		MPMX19_04634	0.25	-1.8
11,994	+		MPMX19_04634	0.26	-1.8
11,994	+		MPMX19_04634	0.26	-0.6
11,995	-		MPMX19_04634	0.27	-0.6
12,030	+		MPMX19_04634	0.29	-0.0
12,030	+		MPMX19_04634	0.29	+0.1
12,030	+		MPMX19_04634	0.29	-2.2
12,030	+		MPMX19_04634	0.29	-0.1
12,030	+		MPMX19_04634	0.29	-1.3
12,030	+		MPMX19_04634	0.29	-0.7
12,030	+		MPMX19_04634	0.29	-0.1
12,031	-		MPMX19_04634	0.29	-1.0
12,031	-		MPMX19_04634	0.29	-1.3
12,031	-		MPMX19_04634	0.29	+0.5
12,031	-		MPMX19_04634	0.29	-0.6
12,031	-		MPMX19_04634	0.29	+0.7
12,031	-		MPMX19_04634	0.29	-0.1
12,031	-		MPMX19_04634	0.29	-0.3
12,031	-		MPMX19_04634	0.29	-1.3
12,031	-		MPMX19_04634	0.29	-1.3
12,031	-		MPMX19_04634	0.29	-0.0
12,036	+		MPMX19_04634	0.29	-0.4
12,036	+		MPMX19_04634	0.29	-1.2
12,037	-		MPMX19_04634	0.29	-1.8
12,037	-		MPMX19_04634	0.29	+0.0
12,120	+		MPMX19_04634	0.35	-1.2
12,120	+		MPMX19_04634	0.35	-0.3
12,120	+		MPMX19_04634	0.35	+0.2
12,120	+		MPMX19_04634	0.35	+0.4
12,120	+		MPMX19_04634	0.35	-0.7
12,120	+		MPMX19_04634	0.35	-2.4
12,120	+		MPMX19_04634	0.35	-0.8
12,120	+		MPMX19_04634	0.35	+0.6
12,120	+		MPMX19_04634	0.35	+0.2
12,121	-		MPMX19_04634	0.35	+1.0
12,121	-		MPMX19_04634	0.35	-0.2
12,121	-		MPMX19_04634	0.35	-1.6
12,121	-		MPMX19_04634	0.35	-0.6
12,145	-		MPMX19_04634	0.36	-0.1
12,208	-		MPMX19_04634	0.41	+0.7
12,222	+		MPMX19_04634	0.42	-0.8
12,222	+		MPMX19_04634	0.42	-1.6
12,222	+		MPMX19_04634	0.42	+0.0
12,223	-		MPMX19_04634	0.42	+0.4
12,223	-		MPMX19_04634	0.42	-0.8
12,223	-		MPMX19_04634	0.42	+0.5
12,642	+		MPMX19_04634	0.69	-0.3
12,642	+		MPMX19_04634	0.69	-1.3
12,642	+		MPMX19_04634	0.69	+0.8
12,643	-		MPMX19_04634	0.69	+0.7
12,643	-		MPMX19_04634	0.69	-0.7
12,643	-		MPMX19_04634	0.69	-1.8
12,643	-		MPMX19_04634	0.69	-1.0
12,643	-		MPMX19_04634	0.69	+0.5
12,643	-		MPMX19_04634	0.69	-0.8
12,663	+		MPMX19_04634	0.71	-1.2
12,663	+		MPMX19_04634	0.71	+0.2
12,663	+		MPMX19_04634	0.71	+0.1
12,664	-		MPMX19_04634	0.71	-1.6
12,664	-		MPMX19_04634	0.71	-0.3
12,664	-		MPMX19_04634	0.71	-1.3
12,717	-		MPMX19_04634	0.74	-1.0
12,834	+		MPMX19_04634	0.82	-1.0
12,834	+		MPMX19_04634	0.82	-0.7
12,835	-		MPMX19_04634	0.82	+0.6
12,835	-		MPMX19_04634	0.82	-0.2
12,835	-		MPMX19_04634	0.82	-0.3
12,835	-		MPMX19_04634	0.82	+1.0
13,211	+				-0.3
13,211	+				+0.1
13,211	+				-1.3
13,211	+				-0.9
13,211	+				-0.4
13,211	+				-0.7
13,211	+				-0.7
13,211	+				-1.0
13,211	+				-0.5
13,211	+				-1.1
13,211	+				-1.0
13,211	+				-1.1
13,211	+				-0.1
13,211	+				-1.0
13,211	+				+0.5
13,211	+				-1.4
13,211	+				-0.5
13,211	+				+1.7
13,212	-				-0.8
13,212	-				-0.5
13,212	-				+1.7
13,212	-				-1.4
13,212	-				-0.1
13,212	-				+1.7
13,212	-				-0.6
13,212	-				+0.5
13,212	-				+0.3
13,212	-				-0.6
13,562	+		MPMX19_04635	0.39	+0.5
13,562	+		MPMX19_04635	0.39	-0.1
13,562	+		MPMX19_04635	0.39	-1.2
13,562	+		MPMX19_04635	0.39	-1.6
13,562	+		MPMX19_04635	0.39	-0.4
13,562	+		MPMX19_04635	0.39	-0.2
13,562	+		MPMX19_04635	0.39	+0.5
13,563	-		MPMX19_04635	0.39	-0.9
13,563	-		MPMX19_04635	0.39	+0.2
13,563	-		MPMX19_04635	0.39	-1.1
13,563	-		MPMX19_04635	0.39	-2.8
13,625	+		MPMX19_04635	0.45	+1.3
13,626	-		MPMX19_04635	0.45	+0.9
13,626	-		MPMX19_04635	0.45	-0.3
13,682	+		MPMX19_04635	0.49	-0.8
13,962	-		MPMX19_04635	0.73	+0.8