Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04617

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,001,897	-				+0.5
1,001,897	-				-1.7
1,001,937	+				-0.2
1,001,937	+				-1.1
1,001,937	+				+0.1
1,001,937	+				+0.5
1,001,937	+				-0.9
1,001,937	+				+1.1
1,001,937	+				-0.2
1,001,937	+				-0.4
1,001,937	+				-0.6
1,001,937	+				-1.2
1,001,937	+				-1.3
1,002,011	+				-0.4
1,002,011	+				-0.4
1,002,219	-		MPMX19_04616	0.37	+0.5
1,002,219	-		MPMX19_04616	0.37	-1.2
1,002,219	-		MPMX19_04616	0.37	+0.9
1,002,219	-		MPMX19_04616	0.37	-0.1
1,002,219	-		MPMX19_04616	0.37	-1.2
1,002,219	-		MPMX19_04616	0.37	+1.5
1,002,219	-		MPMX19_04616	0.37	+0.1
1,002,219	-		MPMX19_04616	0.37	-0.2
1,002,219	-		MPMX19_04616	0.37	-0.1
1,002,219	-		MPMX19_04616	0.37	-1.9
1,002,659	+				-1.5
1,002,659	+				-1.8
1,002,659	+				-0.0
1,002,659	+				+1.3
1,002,659	+				-1.5
1,002,659	+				+1.1
1,002,659	+				+0.6
1,002,660	-				+0.5
1,002,660	-				-0.2
1,002,660	-				+0.2
1,002,660	-				+1.0
1,002,660	-				-2.3
1,002,660	-				-1.3
1,002,660	-				-1.0
1,002,660	-				-2.2
1,002,660	-				-1.5
1,002,660	-				+0.5
1,002,660	-				-0.4
1,002,660	-				-1.9
1,002,660	-				+1.0
1,002,660	-				-2.1
1,002,660	-				-2.3
1,002,764	-				-1.1
1,002,764	-				-1.2
1,002,764	-				+0.2
1,002,764	-				-0.1
1,002,764	-				+0.1
1,002,764	-				-0.9
1,002,893	-		MPMX19_04617	0.23	-0.8
1,002,974	-		MPMX19_04617	0.32	+0.1
1,002,974	-		MPMX19_04617	0.32	-1.2
1,002,974	-		MPMX19_04617	0.32	-0.3
1,002,974	-		MPMX19_04617	0.32	+0.1
1,002,974	-		MPMX19_04617	0.32	+0.9
1,002,974	-		MPMX19_04617	0.32	-0.8
1,002,991	+		MPMX19_04617	0.34	-0.9
1,002,991	+		MPMX19_04617	0.34	-1.5
1,002,991	+		MPMX19_04617	0.34	-1.1
1,002,991	+		MPMX19_04617	0.34	+0.3
1,002,991	+		MPMX19_04617	0.34	-0.2
1,002,991	+		MPMX19_04617	0.34	+0.5
1,002,992	-		MPMX19_04617	0.34	-0.8
1,002,992	-		MPMX19_04617	0.34	-0.5
1,003,051	+		MPMX19_04617	0.41	-1.8
1,003,072	+		MPMX19_04617	0.43	-1.4
1,003,132	+		MPMX19_04617	0.50	-0.9
1,003,132	+		MPMX19_04617	0.50	-1.3
1,003,345	+		MPMX19_04617	0.74	-1.9
1,003,345	+		MPMX19_04617	0.74	-1.4
1,003,822	+		MPMX19_04618	0.25	+0.1
1,003,822	+		MPMX19_04618	0.25	-1.2
1,003,822	+		MPMX19_04618	0.25	+0.6
1,003,822	+		MPMX19_04618	0.25	-0.3
1,003,822	+		MPMX19_04618	0.25	-0.2
1,003,822	+		MPMX19_04618	0.25	+0.7
1,003,822	+		MPMX19_04618	0.25	-0.5
1,003,822	+		MPMX19_04618	0.25	-1.2
1,003,823	-		MPMX19_04618	0.25	+0.5
1,003,823	-		MPMX19_04618	0.25	-1.0
1,003,823	-		MPMX19_04618	0.25	+0.5
1,003,823	-		MPMX19_04618	0.25	+0.1
1,003,823	-		MPMX19_04618	0.25	-1.7
1,003,823	-		MPMX19_04618	0.25	+0.6
1,003,949	-		MPMX19_04618	0.38	-0.5
1,003,949	-		MPMX19_04618	0.38	+0.1
1,003,949	-		MPMX19_04618	0.38	-0.5
1,003,949	-		MPMX19_04618	0.38	-0.4
1,003,949	-		MPMX19_04618	0.38	+0.6
1,003,949	-		MPMX19_04618	0.38	+0.4
1,003,949	-		MPMX19_04618	0.38	+0.2
1,003,949	-		MPMX19_04618	0.38	-2.3
1,003,949	-		MPMX19_04618	0.38	+0.4
1,003,949	-		MPMX19_04618	0.38	-0.4
1,003,949	-		MPMX19_04618	0.38	+0.1
1,003,949	-		MPMX19_04618	0.38	+1.0
1,003,949	-		MPMX19_04618	0.38	+0.5
1,003,949	-		MPMX19_04618	0.38	+1.9
1,003,949	-		MPMX19_04618	0.38	+0.8
1,004,233	+		MPMX19_04618	0.67	+0.5
1,004,233	+		MPMX19_04618	0.67	-0.5
1,004,234	-		MPMX19_04618	0.67	-0.9
1,004,234	-		MPMX19_04618	0.67	+0.2
1,004,435	-		MPMX19_04618	0.87	+1.0
1,004,435	-		MPMX19_04618	0.87	+1.1
1,004,435	-		MPMX19_04618	0.87	-1.2
1,004,435	-		MPMX19_04618	0.87	+0.1
1,004,435	-		MPMX19_04618	0.87	-0.7