Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04387

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
752,891	+		MPMX19_04386	0.24	-2.0
752,892	-		MPMX19_04386	0.24	-0.2
753,263	+		MPMX19_04386	0.53	-1.7
753,263	+		MPMX19_04386	0.53	+0.1
753,263	+		MPMX19_04386	0.53	-0.5
753,263	+		MPMX19_04386	0.53	-2.0
753,263	+		MPMX19_04386	0.53	-0.6
753,264	-		MPMX19_04386	0.53	-1.0
753,264	-		MPMX19_04386	0.53	-0.1
753,264	-		MPMX19_04386	0.53	+0.8
753,293	-		MPMX19_04386	0.55	-0.7
753,293	-		MPMX19_04386	0.55	+0.4
753,293	-		MPMX19_04386	0.55	-0.7
753,338	+		MPMX19_04386	0.59	-1.7
753,338	+		MPMX19_04386	0.59	+0.6
753,338	+		MPMX19_04386	0.59	+0.1
753,338	+		MPMX19_04386	0.59	-0.2
753,338	+		MPMX19_04386	0.59	-0.5
753,338	+		MPMX19_04386	0.59	-0.3
753,338	+		MPMX19_04386	0.59	+1.1
753,338	+		MPMX19_04386	0.59	+1.3
753,338	+		MPMX19_04386	0.59	-0.4
753,338	+		MPMX19_04386	0.59	-0.2
753,338	+		MPMX19_04386	0.59	+0.0
753,338	+		MPMX19_04386	0.59	-0.1
753,338	+		MPMX19_04386	0.59	-0.3
753,338	+		MPMX19_04386	0.59	-1.4
753,338	+		MPMX19_04386	0.59	+1.2
753,338	+		MPMX19_04386	0.59	-1.0
753,338	+		MPMX19_04386	0.59	-0.9
753,338	+		MPMX19_04386	0.59	-0.5
753,338	+		MPMX19_04386	0.59	-0.0
753,338	+		MPMX19_04386	0.59	-0.7
753,338	+		MPMX19_04386	0.59	-0.2
753,338	+		MPMX19_04386	0.59	-2.5
753,338	+		MPMX19_04386	0.59	-0.6
753,338	+		MPMX19_04386	0.59	-0.8
753,338	+		MPMX19_04386	0.59	-0.7
753,338	+		MPMX19_04386	0.59	+0.8
753,338	+		MPMX19_04386	0.59	+1.3
753,338	+		MPMX19_04386	0.59	-0.3
753,338	+		MPMX19_04386	0.59	-1.6
753,338	+		MPMX19_04386	0.59	-0.3
753,338	+		MPMX19_04386	0.59	-0.7
753,338	+		MPMX19_04386	0.59	-0.1
753,339	-		MPMX19_04386	0.59	+0.0
753,339	-		MPMX19_04386	0.59	+0.2
753,339	-		MPMX19_04386	0.59	+0.5
753,339	-		MPMX19_04386	0.59	-0.8
753,339	-		MPMX19_04386	0.59	-0.2
753,339	-		MPMX19_04386	0.59	-1.2
753,339	-		MPMX19_04386	0.59	-0.7
753,339	-		MPMX19_04386	0.59	+0.3
753,339	-		MPMX19_04386	0.59	-0.1
753,339	-		MPMX19_04386	0.59	-1.2
753,339	-		MPMX19_04386	0.59	+0.0
753,339	-		MPMX19_04386	0.59	-0.2
753,339	-		MPMX19_04386	0.59	-1.3
753,339	-		MPMX19_04386	0.59	-0.0
753,339	-		MPMX19_04386	0.59	+1.9
753,339	-		MPMX19_04386	0.59	+0.2
753,339	-		MPMX19_04386	0.59	-0.8
753,339	-		MPMX19_04386	0.59	-1.0
753,339	-		MPMX19_04386	0.59	-2.0
753,339	-		MPMX19_04386	0.59	-0.1
753,339	-		MPMX19_04386	0.59	-0.2
753,339	-		MPMX19_04386	0.59	-2.7
753,339	-		MPMX19_04386	0.59	+0.4
753,339	-		MPMX19_04386	0.59	-1.1
753,339	-		MPMX19_04386	0.59	-0.2
753,339	-		MPMX19_04386	0.59	-0.6
753,339	-		MPMX19_04386	0.59	+0.2
753,339	-		MPMX19_04386	0.59	+0.8
753,339	-		MPMX19_04386	0.59	-0.4
753,339	-		MPMX19_04386	0.59	-0.7
753,339	-		MPMX19_04386	0.59	+0.2
753,339	-		MPMX19_04386	0.59	-0.4
753,340	-		MPMX19_04386	0.59	+0.0
753,341	+		MPMX19_04386	0.59	+0.4
753,341	+		MPMX19_04386	0.59	-0.6
753,341	+		MPMX19_04386	0.59	-1.4
753,341	+		MPMX19_04386	0.59	-1.5
753,341	+		MPMX19_04386	0.59	+0.0
753,341	+		MPMX19_04386	0.59	+0.9
753,341	+		MPMX19_04386	0.59	-0.4
753,341	+		MPMX19_04386	0.59	+0.5
753,341	+		MPMX19_04386	0.59	-0.8
753,341	+		MPMX19_04386	0.59	+0.9
753,341	+		MPMX19_04386	0.59	-0.0
753,341	+		MPMX19_04386	0.59	+1.0
753,341	+		MPMX19_04386	0.59	-2.0
753,341	+		MPMX19_04386	0.59	-0.5
753,341	+		MPMX19_04386	0.59	-1.5
753,341	+		MPMX19_04386	0.59	-1.8
753,341	+		MPMX19_04386	0.59	+1.4
753,341	+		MPMX19_04386	0.59	+1.4
753,341	+		MPMX19_04386	0.59	-2.1
753,341	+		MPMX19_04386	0.59	+0.1
753,341	+		MPMX19_04386	0.59	+1.6
753,341	+		MPMX19_04386	0.59	+0.5
753,341	+		MPMX19_04386	0.59	-2.1
753,341	+		MPMX19_04386	0.59	-1.7
753,341	+		MPMX19_04386	0.59	+0.0
753,341	+		MPMX19_04386	0.59	-1.3
753,341	+		MPMX19_04386	0.59	-0.1
753,341	+		MPMX19_04386	0.59	-0.3
753,342	-		MPMX19_04386	0.59	-0.4
753,342	-		MPMX19_04386	0.59	-0.3
753,342	-		MPMX19_04386	0.59	-0.3
753,342	-		MPMX19_04386	0.59	-1.7
753,342	-		MPMX19_04386	0.59	-1.0
753,342	-		MPMX19_04386	0.59	+0.3
753,342	-		MPMX19_04386	0.59	-1.2
753,342	-		MPMX19_04386	0.59	-1.0
753,342	-		MPMX19_04386	0.59	-1.4
753,342	-		MPMX19_04386	0.59	+0.2
753,342	-		MPMX19_04386	0.59	-2.1
753,342	-		MPMX19_04386	0.59	-1.0
753,342	-		MPMX19_04386	0.59	-0.4
753,342	-		MPMX19_04386	0.59	-0.2
753,342	-		MPMX19_04386	0.59	+0.6
753,342	-		MPMX19_04386	0.59	-0.2
753,342	-		MPMX19_04386	0.59	+1.1
753,342	-		MPMX19_04386	0.59	-2.3
753,342	-		MPMX19_04386	0.59	+1.1
753,342	-		MPMX19_04386	0.59	-1.4
753,342	-		MPMX19_04386	0.59	-0.9
753,342	-		MPMX19_04386	0.59	-0.8
753,437	+		MPMX19_04386	0.67	-1.8
753,437	+		MPMX19_04386	0.67	-0.5
753,437	+		MPMX19_04386	0.67	+0.5
753,437	+		MPMX19_04386	0.67	-2.4
753,437	+		MPMX19_04386	0.67	-0.8
753,437	+		MPMX19_04386	0.67	-0.5
753,437	+		MPMX19_04386	0.67	+0.8
753,437	+		MPMX19_04386	0.67	+0.4
753,437	+		MPMX19_04386	0.67	-1.0
753,438	-		MPMX19_04386	0.67	-1.4
753,438	-		MPMX19_04386	0.67	-0.7
753,438	-		MPMX19_04386	0.67	-0.1
753,438	-		MPMX19_04386	0.67	-1.4
753,438	-		MPMX19_04386	0.67	+0.2
753,438	-		MPMX19_04386	0.67	+0.6
753,568	+		MPMX19_04386	0.77	+0.2
753,568	+		MPMX19_04386	0.77	-0.2
753,569	-		MPMX19_04386	0.77	+0.5
753,569	-		MPMX19_04386	0.77	+0.9
753,569	-		MPMX19_04386	0.77	-0.1
753,669	-		MPMX19_04386	0.85	+0.9
753,669	-		MPMX19_04386	0.85	-0.2
753,705	+		MPMX19_04386	0.87	-1.0
753,705	+		MPMX19_04386	0.87	+0.4
753,705	+		MPMX19_04386	0.87	-0.2
753,705	+		MPMX19_04386	0.87	+0.2
753,706	-		MPMX19_04386	0.88	-0.7
753,706	-		MPMX19_04386	0.88	-0.9
753,706	-		MPMX19_04386	0.88	+0.6
753,706	-		MPMX19_04386	0.88	+0.2
754,006	+		MPMX19_04387	0.50	-0.9
754,006	+		MPMX19_04387	0.50	-0.4
754,006	+		MPMX19_04387	0.50	-2.7
754,006	+		MPMX19_04387	0.50	+0.6
754,006	+		MPMX19_04387	0.50	+0.4
754,006	+		MPMX19_04387	0.50	+0.8
754,006	+		MPMX19_04387	0.50	+0.3
754,007	-		MPMX19_04387	0.51	-1.9
754,007	-		MPMX19_04387	0.51	-1.0
754,007	-		MPMX19_04387	0.51	+0.2
754,007	-		MPMX19_04387	0.51	-1.1
754,007	-		MPMX19_04387	0.51	+0.0
754,007	-		MPMX19_04387	0.51	-1.8
754,007	-		MPMX19_04387	0.51	-1.1
754,007	-		MPMX19_04387	0.51	-1.5
754,007	-		MPMX19_04387	0.51	-0.4
754,007	-		MPMX19_04387	0.51	-2.2
754,007	-		MPMX19_04387	0.51	-1.5
754,007	-		MPMX19_04387	0.51	-3.2
754,082	+		MPMX19_04387	0.81	-0.4
754,082	+		MPMX19_04387	0.81	+1.5
754,082	+		MPMX19_04387	0.81	-1.2
754,082	+		MPMX19_04387	0.81	-0.2
754,082	+		MPMX19_04387	0.81	-0.2
754,082	+		MPMX19_04387	0.81	+1.2
754,082	+		MPMX19_04387	0.81	+0.6
754,082	+		MPMX19_04387	0.81	+0.0
754,083	-		MPMX19_04387	0.82	+1.6
754,083	-		MPMX19_04387	0.82	-0.6
754,083	-		MPMX19_04387	0.82	-0.2
754,083	-		MPMX19_04387	0.82	-1.7
754,084	+		MPMX19_04387	0.82	+0.3
754,084	+		MPMX19_04387	0.82	-0.1
754,084	+		MPMX19_04387	0.82	-0.4
754,084	+		MPMX19_04387	0.82	-0.2
754,084	+		MPMX19_04387	0.82	-0.3
754,084	+		MPMX19_04387	0.82	-0.5
754,084	+		MPMX19_04387	0.82	-0.0
754,084	+		MPMX19_04387	0.82	-0.7
754,084	+		MPMX19_04387	0.82	-0.4
754,084	+		MPMX19_04387	0.82	-1.3
754,084	+		MPMX19_04387	0.82	-0.3
754,084	+		MPMX19_04387	0.82	-1.5
754,084	+		MPMX19_04387	0.82	-0.9
754,084	+		MPMX19_04387	0.82	+0.5
754,084	+		MPMX19_04387	0.82	-0.1
754,084	+		MPMX19_04387	0.82	-1.4
754,084	+		MPMX19_04387	0.82	-0.2
754,084	+		MPMX19_04387	0.82	+0.6
754,084	+		MPMX19_04387	0.82	-0.4
754,085	-		MPMX19_04387	0.83	-1.0
754,085	-		MPMX19_04387	0.83	+0.3
754,085	-		MPMX19_04387	0.83	-0.7
754,085	-		MPMX19_04387	0.83	-1.3
754,085	-		MPMX19_04387	0.83	-0.3
754,085	-		MPMX19_04387	0.83	-1.5
754,085	-		MPMX19_04387	0.83	-1.8
754,085	-		MPMX19_04387	0.83	-0.9
754,085	-		MPMX19_04387	0.83	-0.0
754,085	-		MPMX19_04387	0.83	+0.2
754,085	-		MPMX19_04387	0.83	+0.0
754,085	-		MPMX19_04387	0.83	-0.4
754,085	-		MPMX19_04387	0.83	+0.7
754,085	-		MPMX19_04387	0.83	-1.8
754,085	-		MPMX19_04387	0.83	+0.9
754,085	-		MPMX19_04387	0.83	+0.2
754,085	-		MPMX19_04387	0.83	-1.4
754,085	-		MPMX19_04387	0.83	-0.1
754,085	-		MPMX19_04387	0.83	+0.3
754,085	-		MPMX19_04387	0.83	+0.5
754,085	-		MPMX19_04387	0.83	-2.2
754,085	-		MPMX19_04387	0.83	+0.0
754,085	-		MPMX19_04387	0.83	-1.4
754,085	-		MPMX19_04387	0.83	-1.4
754,085	-		MPMX19_04387	0.83	-0.1
754,123	+				-0.5
754,123	+				-0.4
754,123	+				-1.0
754,123	+				-2.2
754,124	-				+1.3
754,124	-				-1.2
754,124	-				-0.1
754,124	-				-2.1
754,124	-				+0.2
754,124	-				+0.8
754,124	-				+0.2
754,124	-				-1.4
754,124	-				-0.3
754,124	-				-2.5
754,124	-				-0.9
754,124	-				+0.6
754,124	-				-0.6
754,124	-				-0.2
754,136	+				+0.3