Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04321 and MPMX19_04322 are separated by 73 nucleotides MPMX19_04322 and MPMX19_04323 are separated by 161 nucleotides MPMX19_04323 and MPMX19_04324 overlap by 8 nucleotides MPMX19_04324 and MPMX19_04325 are separated by 11 nucleotides
MPMX19_04321: MPMX19_04321 - Sec-independent protein translocase protein TatB, at 686,621 to 687,157
_04321
MPMX19_04322: MPMX19_04322 - Sec-independent protein translocase protein TatA, at 687,231 to 687,470
_04322
MPMX19_04323: MPMX19_04323 - Segregation and condensation protein B, at 687,632 to 688,249
_04323
MPMX19_04324: MPMX19_04324 - Segregation and condensation protein A, at 688,242 to 689,072
_04324
MPMX19_04325: MPMX19_04325 - hypothetical protein, at 689,084 to 689,761
_04325
Position (kb) 687
688
689 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 687.480 kb on - strand at 687.480 kb on - strand at 687.480 kb on - strand at 687.516 kb on - strand at 687.516 kb on - strand at 687.516 kb on - strand at 687.516 kb on - strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.633 kb on + strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.634 kb on - strand at 687.936 kb on + strand, within MPMX19_04323 at 687.936 kb on + strand, within MPMX19_04323 at 687.936 kb on + strand, within MPMX19_04323 at 687.936 kb on + strand, within MPMX19_04323 at 687.936 kb on + strand, within MPMX19_04323 at 687.937 kb on - strand, within MPMX19_04323 at 687.937 kb on - strand, within MPMX19_04323 at 687.937 kb on - strand, within MPMX19_04323 at 688.083 kb on + strand, within MPMX19_04323 at 688.083 kb on + strand, within MPMX19_04323 at 688.083 kb on + strand, within MPMX19_04323 at 688.083 kb on + strand, within MPMX19_04323 at 688.083 kb on + strand, within MPMX19_04323 at 688.083 kb on + strand, within MPMX19_04323 at 688.243 kb on + strand at 688.243 kb on + strand at 688.243 kb on + strand at 688.243 kb on + strand at 688.243 kb on + strand at 688.243 kb on + strand at 688.244 kb on - strand at 688.244 kb on - strand at 688.244 kb on - strand at 688.244 kb on - strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.309 kb on + strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.310 kb on - strand at 688.513 kb on + strand, within MPMX19_04324 at 688.513 kb on + strand, within MPMX19_04324 at 688.513 kb on + strand, within MPMX19_04324 at 688.574 kb on - strand, within MPMX19_04324 at 688.574 kb on - strand, within MPMX19_04324 at 688.574 kb on - strand, within MPMX19_04324 at 688.606 kb on + strand, within MPMX19_04324 at 688.606 kb on + strand, within MPMX19_04324 at 688.606 kb on + strand, within MPMX19_04324 at 688.606 kb on + strand, within MPMX19_04324 at 688.607 kb on - strand, within MPMX19_04324 at 688.607 kb on - strand, within MPMX19_04324 at 688.607 kb on - strand, within MPMX19_04324 at 688.810 kb on + strand, within MPMX19_04324 at 688.810 kb on + strand, within MPMX19_04324 at 688.811 kb on - strand, within MPMX19_04324 at 688.837 kb on + strand, within MPMX19_04324 at 688.837 kb on + strand, within MPMX19_04324 at 688.837 kb on + strand, within MPMX19_04324 at 688.837 kb on + strand, within MPMX19_04324 at 688.838 kb on - strand, within MPMX19_04324 at 688.838 kb on - strand, within MPMX19_04324 at 688.838 kb on - strand, within MPMX19_04324 at 688.838 kb on - strand, within MPMX19_04324 at 688.838 kb on - strand, within MPMX19_04324 at 688.891 kb on + strand, within MPMX19_04324 at 688.891 kb on + strand, within MPMX19_04324 at 688.891 kb on + strand, within MPMX19_04324 at 688.892 kb on - strand, within MPMX19_04324 at 689.082 kb on + strand at 689.082 kb on + strand at 689.082 kb on + strand at 689.082 kb on + strand at 689.082 kb on + strand at 689.082 kb on + strand at 689.082 kb on + strand at 689.083 kb on - strand at 689.083 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 687,480 - +0.6 687,480 - -0.1 687,480 - -2.8 687,516 - -0.1 687,516 - +0.6 687,516 - +0.1 687,516 - -0.6 687,633 + +0.5 687,633 + +1.0 687,633 + +0.6 687,633 + -0.5 687,633 + +0.2 687,633 + -0.2 687,633 + -2.2 687,633 + -0.5 687,633 + +0.0 687,633 + +0.2 687,633 + -0.4 687,633 + -1.8 687,633 + +0.2 687,633 + +1.1 687,633 + +1.3 687,633 + +0.5 687,633 + +0.4 687,633 + -0.6 687,633 + +0.9 687,634 - +1.1 687,634 - +0.1 687,634 - -0.3 687,634 - -0.5 687,634 - -0.6 687,634 - -0.0 687,634 - -1.0 687,634 - +0.1 687,634 - -0.5 687,634 - +0.2 687,634 - +0.6 687,634 - +0.2 687,634 - -1.0 687,634 - -0.1 687,634 - +0.6 687,634 - -0.4 687,936 + MPMX19_04323 0.49 -0.4 687,936 + MPMX19_04323 0.49 +0.0 687,936 + MPMX19_04323 0.49 +1.0 687,936 + MPMX19_04323 0.49 +0.6 687,936 + MPMX19_04323 0.49 -1.1 687,937 - MPMX19_04323 0.49 -1.1 687,937 - MPMX19_04323 0.49 -0.6 687,937 - MPMX19_04323 0.49 -0.2 688,083 + MPMX19_04323 0.73 +1.2 688,083 + MPMX19_04323 0.73 -1.0 688,083 + MPMX19_04323 0.73 -2.3 688,083 + MPMX19_04323 0.73 -1.8 688,083 + MPMX19_04323 0.73 -2.2 688,083 + MPMX19_04323 0.73 +0.2 688,243 + +0.0 688,243 + -1.4 688,243 + -0.9 688,243 + +0.0 688,243 + -0.4 688,243 + -1.0 688,244 - +2.6 688,244 - +0.7 688,244 - -2.7 688,244 - -1.2 688,309 + -1.5 688,309 + +0.6 688,309 + +0.0 688,309 + -1.0 688,309 + -1.4 688,309 + +0.3 688,309 + +0.3 688,309 + -0.5 688,309 + -1.3 688,310 - -0.7 688,310 - +0.2 688,310 - +0.2 688,310 - -0.7 688,310 - -1.6 688,310 - +0.4 688,310 - -0.2 688,310 - +0.3 688,310 - +0.2 688,513 + MPMX19_04324 0.33 +0.0 688,513 + MPMX19_04324 0.33 +1.9 688,513 + MPMX19_04324 0.33 +1.6 688,574 - MPMX19_04324 0.40 +0.6 688,574 - MPMX19_04324 0.40 -0.1 688,574 - MPMX19_04324 0.40 +0.2 688,606 + MPMX19_04324 0.44 +1.0 688,606 + MPMX19_04324 0.44 -0.4 688,606 + MPMX19_04324 0.44 -1.0 688,606 + MPMX19_04324 0.44 +0.5 688,607 - MPMX19_04324 0.44 +0.0 688,607 - MPMX19_04324 0.44 +0.6 688,607 - MPMX19_04324 0.44 +0.0 688,810 + MPMX19_04324 0.68 +0.3 688,810 + MPMX19_04324 0.68 +0.0 688,811 - MPMX19_04324 0.68 -1.2 688,837 + MPMX19_04324 0.72 +0.0 688,837 + MPMX19_04324 0.72 -1.6 688,837 + MPMX19_04324 0.72 +0.6 688,837 + MPMX19_04324 0.72 -0.3 688,838 - MPMX19_04324 0.72 -0.0 688,838 - MPMX19_04324 0.72 +0.0 688,838 - MPMX19_04324 0.72 -1.4 688,838 - MPMX19_04324 0.72 -0.1 688,838 - MPMX19_04324 0.72 -1.0 688,891 + MPMX19_04324 0.78 -0.0 688,891 + MPMX19_04324 0.78 -1.2 688,891 + MPMX19_04324 0.78 -1.2 688,892 - MPMX19_04324 0.78 -1.2 689,082 + -0.1 689,082 + -0.5 689,082 + -0.6 689,082 + -1.2 689,082 + -0.9 689,082 + -1.4 689,082 + +0.2 689,083 - -0.6 689,083 - +0.0
Or see this region's nucleotide sequence