Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04170 and MPMX19_04171 are separated by 671 nucleotides MPMX19_04171 and MPMX19_04172 are separated by 291 nucleotides
MPMX19_04170: MPMX19_04170 - Glutathione-regulated potassium-efflux system protein KefC, at 489,968 to 491,665
_04170
MPMX19_04171: MPMX19_04171 - 16S ribosomal RNA, at 492,337 to 493,818
_04171
MPMX19_04172: MPMX19_04172 - 23S ribosomal RNA, at 494,110 to 496,843
_04172
Position (kb) 492
493
494 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.409 kb on + strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.410 kb on - strand, within MPMX19_04170 at 491.563 kb on - strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.701 kb on + strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.702 kb on - strand at 491.743 kb on + strand at 491.743 kb on + strand at 491.744 kb on - strand at 491.744 kb on - strand at 491.744 kb on - strand at 491.744 kb on - strand at 491.777 kb on + strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.778 kb on - strand at 491.826 kb on - strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.853 kb on + strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.854 kb on - strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.855 kb on + strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.856 kb on - strand at 491.857 kb on + strand at 491.858 kb on - strand at 491.858 kb on - strand at 491.858 kb on - strand at 492.063 kb on + strand at 492.063 kb on + strand at 492.063 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 492.134 kb on + strand at 493.254 kb on + strand, within MPMX19_04171 at 493.276 kb on + strand, within MPMX19_04171 at 493.276 kb on + strand, within MPMX19_04171 at 493.276 kb on + strand, within MPMX19_04171 at 494.022 kb on + strand at 494.022 kb on + strand at 494.022 kb on + strand at 494.022 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 491,409 + MPMX19_04170 0.85 -3.5 491,409 + MPMX19_04170 0.85 -0.4 491,409 + MPMX19_04170 0.85 -0.1 491,409 + MPMX19_04170 0.85 +0.1 491,409 + MPMX19_04170 0.85 -1.3 491,409 + MPMX19_04170 0.85 -0.5 491,409 + MPMX19_04170 0.85 -0.8 491,409 + MPMX19_04170 0.85 +1.2 491,409 + MPMX19_04170 0.85 -0.6 491,409 + MPMX19_04170 0.85 -0.2 491,409 + MPMX19_04170 0.85 -1.6 491,409 + MPMX19_04170 0.85 -1.0 491,409 + MPMX19_04170 0.85 +0.7 491,409 + MPMX19_04170 0.85 +1.2 491,409 + MPMX19_04170 0.85 +2.6 491,409 + MPMX19_04170 0.85 -0.7 491,409 + MPMX19_04170 0.85 -0.6 491,409 + MPMX19_04170 0.85 -0.1 491,409 + MPMX19_04170 0.85 -0.8 491,409 + MPMX19_04170 0.85 -1.6 491,409 + MPMX19_04170 0.85 +1.8 491,409 + MPMX19_04170 0.85 -0.9 491,409 + MPMX19_04170 0.85 +1.2 491,409 + MPMX19_04170 0.85 -0.1 491,409 + MPMX19_04170 0.85 -0.6 491,409 + MPMX19_04170 0.85 -1.4 491,409 + MPMX19_04170 0.85 -1.8 491,409 + MPMX19_04170 0.85 -3.1 491,409 + MPMX19_04170 0.85 +1.0 491,409 + MPMX19_04170 0.85 -0.1 491,409 + MPMX19_04170 0.85 +0.8 491,410 - MPMX19_04170 0.85 -1.1 491,410 - MPMX19_04170 0.85 -2.6 491,410 - MPMX19_04170 0.85 -0.7 491,410 - MPMX19_04170 0.85 -1.6 491,410 - MPMX19_04170 0.85 -1.1 491,410 - MPMX19_04170 0.85 +0.3 491,410 - MPMX19_04170 0.85 +0.4 491,410 - MPMX19_04170 0.85 -2.4 491,410 - MPMX19_04170 0.85 -2.3 491,410 - MPMX19_04170 0.85 +0.2 491,410 - MPMX19_04170 0.85 +1.0 491,410 - MPMX19_04170 0.85 +0.3 491,410 - MPMX19_04170 0.85 -0.7 491,410 - MPMX19_04170 0.85 -0.3 491,410 - MPMX19_04170 0.85 -0.8 491,410 - MPMX19_04170 0.85 +0.2 491,410 - MPMX19_04170 0.85 +2.0 491,410 - MPMX19_04170 0.85 -0.4 491,410 - MPMX19_04170 0.85 -1.0 491,410 - MPMX19_04170 0.85 -1.0 491,410 - MPMX19_04170 0.85 +0.6 491,410 - MPMX19_04170 0.85 -1.0 491,410 - MPMX19_04170 0.85 -0.5 491,410 - MPMX19_04170 0.85 +0.3 491,410 - MPMX19_04170 0.85 +1.1 491,410 - MPMX19_04170 0.85 +0.6 491,410 - MPMX19_04170 0.85 +0.6 491,410 - MPMX19_04170 0.85 +1.0 491,410 - MPMX19_04170 0.85 +0.2 491,410 - MPMX19_04170 0.85 -0.8 491,410 - MPMX19_04170 0.85 -0.0 491,410 - MPMX19_04170 0.85 -0.9 491,563 - -0.4 491,701 + -0.6 491,701 + -0.8 491,701 + -0.6 491,701 + -0.6 491,701 + -1.1 491,702 - +0.4 491,702 - +0.3 491,702 - -0.0 491,702 - -0.8 491,702 - +0.4 491,702 - -0.9 491,702 - -0.3 491,702 - -1.3 491,743 + +0.1 491,743 + -0.9 491,744 - -1.0 491,744 - -0.4 491,744 - -0.5 491,744 - -0.0 491,777 + +0.6 491,778 - +0.2 491,778 - -0.1 491,778 - +0.4 491,778 - -1.0 491,778 - -0.0 491,778 - -1.6 491,778 - +0.2 491,826 - -0.8 491,853 + -0.7 491,853 + +0.6 491,853 + +0.1 491,853 + -0.1 491,853 + -0.0 491,853 + -0.7 491,853 + -0.6 491,853 + +0.6 491,853 + -1.3 491,853 + -0.9 491,853 + -0.2 491,853 + -0.3 491,853 + -0.1 491,853 + -0.0 491,853 + +0.3 491,853 + +0.6 491,853 + +0.1 491,853 + -1.4 491,853 + -0.4 491,853 + +0.3 491,854 - -1.3 491,854 - -0.8 491,854 - +1.3 491,854 - -0.2 491,854 - -0.1 491,854 - +0.6 491,854 - +0.4 491,854 - -3.0 491,854 - +0.3 491,854 - +0.6 491,854 - +0.9 491,854 - -0.2 491,854 - -2.8 491,854 - -0.0 491,854 - +1.1 491,854 - -0.2 491,854 - -0.4 491,855 + +0.0 491,855 + +0.2 491,855 + -0.8 491,855 + -0.2 491,855 + +0.4 491,855 + -0.0 491,855 + -0.4 491,855 + -1.4 491,855 + -2.1 491,855 + -1.3 491,855 + -1.3 491,855 + -0.6 491,856 - -1.3 491,856 - -0.2 491,856 - +1.0 491,856 - -3.1 491,856 - -0.0 491,856 - -0.0 491,856 - +0.4 491,857 + -0.8 491,858 - -0.4 491,858 - -1.5 491,858 - -0.8 492,063 + +0.4 492,063 + +0.5 492,063 + +0.3 492,134 + +0.1 492,134 + -2.9 492,134 + +0.7 492,134 + +2.1 492,134 + -1.0 492,134 + +0.6 492,134 + -1.0 492,134 + -0.5 492,134 + -1.6 492,134 + -0.2 493,254 + MPMX19_04171 0.62 -0.5 493,276 + MPMX19_04171 0.63 -1.0 493,276 + MPMX19_04171 0.63 -0.9 493,276 + MPMX19_04171 0.63 -1.6 494,022 + -0.8 494,022 + -1.9 494,022 + -1.5 494,022 + -1.8
Or see this region's nucleotide sequence