Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04061 and MPMX19_04062 are separated by 347 nucleotides MPMX19_04062 and MPMX19_04063 are separated by 105 nucleotides MPMX19_04063 and MPMX19_04064 are separated by 33 nucleotides
MPMX19_04061: MPMX19_04061 - hypothetical protein, at 365,838 to 366,797
_04061
MPMX19_04062: MPMX19_04062 - hypothetical protein, at 367,145 to 367,558
_04062
MPMX19_04063: MPMX19_04063 - scyllo-inositol 2-dehydrogenase (NADP(+)) IolW, at 367,664 to 368,680
_04063
MPMX19_04064: MPMX19_04064 - hypothetical protein, at 368,714 to 370,516
_04064
Position (kb) 367
368
369 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 366.776 kb on - strand at 366.934 kb on + strand at 366.934 kb on + strand at 366.935 kb on - strand at 367.000 kb on + strand at 367.000 kb on + strand at 367.000 kb on + strand at 367.001 kb on - strand at 367.001 kb on - strand at 367.001 kb on - strand at 367.001 kb on - strand at 367.012 kb on - strand at 367.069 kb on + strand at 367.069 kb on + strand at 367.069 kb on + strand at 367.070 kb on - strand at 367.070 kb on - strand at 367.070 kb on - strand at 367.070 kb on - strand at 367.070 kb on - strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.115 kb on + strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.116 kb on - strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.117 kb on + strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.118 kb on - strand at 367.144 kb on + strand at 367.144 kb on + strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.145 kb on - strand at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.252 kb on + strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.253 kb on - strand, within MPMX19_04062 at 367.381 kb on + strand, within MPMX19_04062 at 367.381 kb on + strand, within MPMX19_04062 at 367.382 kb on - strand, within MPMX19_04062 at 367.382 kb on - strand, within MPMX19_04062 at 367.382 kb on - strand, within MPMX19_04062 at 367.382 kb on - strand, within MPMX19_04062 at 367.382 kb on - strand, within MPMX19_04062 at 367.382 kb on - strand, within MPMX19_04062 at 367.513 kb on + strand, within MPMX19_04062 at 367.514 kb on - strand, within MPMX19_04062 at 367.519 kb on + strand at 367.520 kb on - strand at 367.520 kb on - strand at 367.520 kb on - strand at 368.093 kb on + strand, within MPMX19_04063 at 368.099 kb on + strand, within MPMX19_04063 at 368.099 kb on + strand, within MPMX19_04063 at 368.099 kb on + strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.100 kb on - strand, within MPMX19_04063 at 368.111 kb on + strand, within MPMX19_04063 at 368.111 kb on + strand, within MPMX19_04063 at 368.111 kb on + strand, within MPMX19_04063 at 368.111 kb on + strand, within MPMX19_04063 at 368.111 kb on + strand, within MPMX19_04063 at 368.111 kb on + strand, within MPMX19_04063 at 368.111 kb on + strand, within MPMX19_04063 at 368.112 kb on - strand, within MPMX19_04063 at 368.112 kb on - strand, within MPMX19_04063 at 368.112 kb on - strand, within MPMX19_04063 at 368.112 kb on - strand, within MPMX19_04063 at 368.112 kb on - strand, within MPMX19_04063 at 368.112 kb on - strand, within MPMX19_04063 at 368.112 kb on - strand, within MPMX19_04063 at 368.309 kb on + strand, within MPMX19_04063 at 368.310 kb on - strand, within MPMX19_04063 at 368.549 kb on + strand, within MPMX19_04063 at 368.549 kb on + strand, within MPMX19_04063 at 368.550 kb on - strand, within MPMX19_04063 at 368.550 kb on - strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.561 kb on + strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.562 kb on - strand, within MPMX19_04063 at 368.701 kb on + strand at 368.702 kb on - strand at 368.702 kb on - strand at 368.853 kb on + strand at 368.853 kb on + strand at 368.853 kb on + strand at 368.853 kb on + strand at 368.854 kb on - strand at 368.854 kb on - strand at 369.105 kb on + strand, within MPMX19_04064 at 369.105 kb on + strand, within MPMX19_04064 at 369.105 kb on + strand, within MPMX19_04064 at 369.106 kb on - strand, within MPMX19_04064 at 369.106 kb on - strand, within MPMX19_04064 at 369.106 kb on - strand, within MPMX19_04064 at 369.106 kb on - strand, within MPMX19_04064 at 369.135 kb on + strand, within MPMX19_04064 at 369.135 kb on + strand, within MPMX19_04064 at 369.135 kb on + strand, within MPMX19_04064 at 369.136 kb on - strand, within MPMX19_04064 at 369.136 kb on - strand, within MPMX19_04064 at 369.136 kb on - strand, within MPMX19_04064 at 369.393 kb on + strand, within MPMX19_04064 at 369.412 kb on + strand, within MPMX19_04064 at 369.412 kb on + strand, within MPMX19_04064 at 369.435 kb on + strand, within MPMX19_04064 at 369.435 kb on + strand, within MPMX19_04064 at 369.435 kb on + strand, within MPMX19_04064 at 369.435 kb on + strand, within MPMX19_04064 at 369.435 kb on + strand, within MPMX19_04064 at 369.436 kb on - strand, within MPMX19_04064 at 369.436 kb on - strand, within MPMX19_04064 at 369.436 kb on - strand, within MPMX19_04064 at 369.436 kb on - strand, within MPMX19_04064 at 369.436 kb on - strand, within MPMX19_04064 at 369.436 kb on - strand, within MPMX19_04064 at 369.436 kb on - strand, within MPMX19_04064
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 366,776 - +0.3 366,934 + -0.5 366,934 + -1.7 366,935 - +0.2 367,000 + -1.6 367,000 + +0.1 367,000 + -1.9 367,001 - -0.7 367,001 - -3.1 367,001 - +0.6 367,001 - -0.1 367,012 - -1.7 367,069 + +2.3 367,069 + +0.6 367,069 + +0.7 367,070 - -0.4 367,070 - +0.3 367,070 - +1.0 367,070 - -0.4 367,070 - -2.2 367,115 + +0.3 367,115 + -0.2 367,115 + -2.2 367,115 + +0.5 367,115 + -0.7 367,115 + -1.8 367,115 + -0.5 367,115 + -1.4 367,115 + -0.3 367,115 + -0.2 367,115 + +1.3 367,115 + +0.0 367,115 + +0.6 367,115 + -0.6 367,115 + +0.9 367,115 + -0.3 367,115 + -0.1 367,115 + +0.0 367,115 + -1.5 367,115 + -0.2 367,115 + +0.0 367,115 + -2.5 367,115 + -0.7 367,115 + +0.5 367,115 + -0.4 367,115 + +0.0 367,115 + -0.6 367,115 + +0.1 367,115 + -0.1 367,115 + +0.1 367,115 + +1.2 367,115 + +0.3 367,115 + +0.2 367,115 + -0.8 367,115 + -0.1 367,115 + +0.2 367,115 + -0.3 367,115 + +0.5 367,115 + -1.7 367,115 + -0.3 367,115 + -1.8 367,115 + +0.4 367,115 + +0.1 367,115 + +0.0 367,115 + -0.1 367,115 + -0.4 367,115 + -0.1 367,115 + -0.1 367,115 + -1.0 367,115 + +0.0 367,115 + +0.1 367,115 + -0.5 367,115 + +1.4 367,115 + +1.1 367,115 + +0.0 367,115 + -1.4 367,116 - -0.4 367,116 - +0.0 367,116 - +0.5 367,116 - -0.4 367,116 - +0.8 367,116 - -1.8 367,116 - +1.0 367,116 - -0.5 367,116 - -0.3 367,116 - -1.1 367,116 - -1.0 367,116 - -2.5 367,116 - -0.4 367,116 - -1.9 367,116 - +0.3 367,116 - -0.4 367,116 - -0.1 367,116 - +0.5 367,116 - +0.8 367,116 - -0.5 367,116 - -0.7 367,116 - -2.0 367,116 - +0.9 367,116 - +0.3 367,116 - -0.3 367,116 - -0.7 367,116 - -0.4 367,116 - +0.1 367,116 - +0.6 367,116 - -0.4 367,116 - -0.3 367,116 - +0.4 367,116 - -1.1 367,116 - +0.4 367,116 - -0.2 367,116 - -1.9 367,116 - -1.0 367,116 - -1.4 367,116 - -1.0 367,116 - +0.1 367,116 - -0.2 367,116 - +0.4 367,116 - +0.0 367,116 - +0.9 367,116 - -0.4 367,116 - -0.5 367,116 - +2.6 367,116 - +0.9 367,116 - -0.2 367,116 - +0.1 367,116 - +0.1 367,116 - +0.0 367,116 - -0.7 367,117 + -1.2 367,117 + -0.9 367,117 + -0.2 367,117 + +0.6 367,117 + -0.6 367,117 + +0.4 367,117 + -1.4 367,117 + -0.1 367,117 + +0.7 367,117 + +2.6 367,117 + +0.3 367,117 + +0.3 367,117 + -1.9 367,117 + -0.3 367,117 + +0.6 367,117 + -0.6 367,117 + -0.8 367,117 + -0.4 367,117 + +0.3 367,117 + -0.7 367,117 + +0.4 367,117 + -1.2 367,117 + -0.7 367,117 + +0.6 367,118 - -0.5 367,118 - -0.5 367,118 - -1.6 367,118 - -1.6 367,118 - +0.3 367,118 - -1.3 367,118 - +0.8 367,118 - -0.1 367,118 - -0.4 367,118 - -0.0 367,118 - +0.5 367,118 - -0.1 367,118 - +0.4 367,118 - +2.1 367,118 - -0.1 367,118 - +0.9 367,118 - -2.0 367,118 - +0.6 367,118 - -0.3 367,118 - -0.6 367,144 + -1.4 367,144 + -1.0 367,145 - +0.1 367,145 - -0.5 367,145 - -0.5 367,145 - -0.1 367,145 - -2.5 367,145 - -0.2 367,145 - +1.2 367,145 - -1.1 367,145 - -1.0 367,252 + MPMX19_04062 0.26 -0.0 367,252 + MPMX19_04062 0.26 +0.9 367,252 + MPMX19_04062 0.26 +0.4 367,252 + MPMX19_04062 0.26 +0.3 367,252 + MPMX19_04062 0.26 -1.0 367,252 + MPMX19_04062 0.26 -0.2 367,252 + MPMX19_04062 0.26 +0.7 367,252 + MPMX19_04062 0.26 +0.8 367,252 + MPMX19_04062 0.26 +0.6 367,252 + MPMX19_04062 0.26 -0.4 367,253 - MPMX19_04062 0.26 +1.0 367,253 - MPMX19_04062 0.26 +0.2 367,253 - MPMX19_04062 0.26 -0.4 367,253 - MPMX19_04062 0.26 +2.0 367,253 - MPMX19_04062 0.26 -0.7 367,253 - MPMX19_04062 0.26 -0.7 367,253 - MPMX19_04062 0.26 -0.6 367,253 - MPMX19_04062 0.26 -0.7 367,253 - MPMX19_04062 0.26 -0.6 367,253 - MPMX19_04062 0.26 -1.1 367,253 - MPMX19_04062 0.26 -0.3 367,253 - MPMX19_04062 0.26 +0.1 367,253 - MPMX19_04062 0.26 -0.1 367,253 - MPMX19_04062 0.26 -0.4 367,253 - MPMX19_04062 0.26 -0.5 367,253 - MPMX19_04062 0.26 +2.3 367,381 + MPMX19_04062 0.57 +0.4 367,381 + MPMX19_04062 0.57 +1.1 367,382 - MPMX19_04062 0.57 -0.1 367,382 - MPMX19_04062 0.57 -0.7 367,382 - MPMX19_04062 0.57 +0.6 367,382 - MPMX19_04062 0.57 -1.0 367,382 - MPMX19_04062 0.57 -0.4 367,382 - MPMX19_04062 0.57 -0.4 367,513 + MPMX19_04062 0.89 +0.5 367,514 - MPMX19_04062 0.89 +0.5 367,519 + -1.6 367,520 - +0.3 367,520 - -0.7 367,520 - -0.7 368,093 + MPMX19_04063 0.42 -1.0 368,099 + MPMX19_04063 0.43 -0.6 368,099 + MPMX19_04063 0.43 -0.1 368,099 + MPMX19_04063 0.43 -0.6 368,100 - MPMX19_04063 0.43 +0.9 368,100 - MPMX19_04063 0.43 +0.1 368,100 - MPMX19_04063 0.43 +0.8 368,100 - MPMX19_04063 0.43 -0.9 368,100 - MPMX19_04063 0.43 +0.3 368,100 - MPMX19_04063 0.43 -0.1 368,100 - MPMX19_04063 0.43 +0.3 368,100 - MPMX19_04063 0.43 +0.4 368,100 - MPMX19_04063 0.43 +0.1 368,100 - MPMX19_04063 0.43 -0.2 368,111 + MPMX19_04063 0.44 -0.3 368,111 + MPMX19_04063 0.44 -0.4 368,111 + MPMX19_04063 0.44 +0.4 368,111 + MPMX19_04063 0.44 -0.3 368,111 + MPMX19_04063 0.44 -1.1 368,111 + MPMX19_04063 0.44 +0.7 368,111 + MPMX19_04063 0.44 +0.5 368,112 - MPMX19_04063 0.44 +0.0 368,112 - MPMX19_04063 0.44 +0.4 368,112 - MPMX19_04063 0.44 +1.0 368,112 - MPMX19_04063 0.44 +1.2 368,112 - MPMX19_04063 0.44 +0.4 368,112 - MPMX19_04063 0.44 +0.0 368,112 - MPMX19_04063 0.44 +0.3 368,309 + MPMX19_04063 0.63 -1.3 368,310 - MPMX19_04063 0.64 -0.5 368,549 + MPMX19_04063 0.87 -1.3 368,549 + MPMX19_04063 0.87 -0.5 368,550 - MPMX19_04063 0.87 -1.6 368,550 - MPMX19_04063 0.87 -0.2 368,561 + MPMX19_04063 0.88 -0.5 368,561 + MPMX19_04063 0.88 +0.0 368,561 + MPMX19_04063 0.88 +0.1 368,561 + MPMX19_04063 0.88 -0.1 368,561 + MPMX19_04063 0.88 -1.0 368,561 + MPMX19_04063 0.88 -0.1 368,561 + MPMX19_04063 0.88 -0.7 368,561 + MPMX19_04063 0.88 +0.2 368,562 - MPMX19_04063 0.88 -0.2 368,562 - MPMX19_04063 0.88 -0.1 368,562 - MPMX19_04063 0.88 -1.1 368,562 - MPMX19_04063 0.88 +0.3 368,562 - MPMX19_04063 0.88 -0.5 368,562 - MPMX19_04063 0.88 -0.4 368,562 - MPMX19_04063 0.88 -0.3 368,562 - MPMX19_04063 0.88 -1.0 368,562 - MPMX19_04063 0.88 +0.8 368,701 + -0.6 368,702 - +0.1 368,702 - -0.1 368,853 + +0.0 368,853 + -0.6 368,853 + +0.8 368,853 + +1.3 368,854 - +1.3 368,854 - -1.4 369,105 + MPMX19_04064 0.22 -0.1 369,105 + MPMX19_04064 0.22 +0.7 369,105 + MPMX19_04064 0.22 +0.9 369,106 - MPMX19_04064 0.22 -0.0 369,106 - MPMX19_04064 0.22 -0.0 369,106 - MPMX19_04064 0.22 -0.0 369,106 - MPMX19_04064 0.22 +0.4 369,135 + MPMX19_04064 0.23 -0.4 369,135 + MPMX19_04064 0.23 +1.4 369,135 + MPMX19_04064 0.23 +0.3 369,136 - MPMX19_04064 0.23 +0.9 369,136 - MPMX19_04064 0.23 -0.9 369,136 - MPMX19_04064 0.23 +0.2 369,393 + MPMX19_04064 0.38 -0.0 369,412 + MPMX19_04064 0.39 -1.7 369,412 + MPMX19_04064 0.39 -2.1 369,435 + MPMX19_04064 0.40 -1.1 369,435 + MPMX19_04064 0.40 +0.6 369,435 + MPMX19_04064 0.40 -0.9 369,435 + MPMX19_04064 0.40 -1.1 369,435 + MPMX19_04064 0.40 -1.0 369,436 - MPMX19_04064 0.40 -0.0 369,436 - MPMX19_04064 0.40 +1.0 369,436 - MPMX19_04064 0.40 +0.8 369,436 - MPMX19_04064 0.40 -1.3 369,436 - MPMX19_04064 0.40 +0.2 369,436 - MPMX19_04064 0.40 +1.1 369,436 - MPMX19_04064 0.40 -0.7
Or see this region's nucleotide sequence