Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03849

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
88,352	+		MPMX19_03848	0.86	-1.7
88,352	+		MPMX19_03848	0.86	+0.3
88,352	+		MPMX19_03848	0.86	-0.4
88,353	-		MPMX19_03848	0.86	+0.9
88,353	-		MPMX19_03848	0.86	+0.4
88,353	-		MPMX19_03848	0.86	-0.8
88,353	-		MPMX19_03848	0.86	-0.9
88,353	-		MPMX19_03848	0.86	-0.7
88,353	-		MPMX19_03848	0.86	-1.5
88,353	-		MPMX19_03848	0.86	+3.2
88,391	+		MPMX19_03848	0.87	+0.2
88,391	+		MPMX19_03848	0.87	+0.2
88,391	+		MPMX19_03848	0.87	+0.1
88,391	+		MPMX19_03848	0.87	-0.2
88,391	+		MPMX19_03848	0.87	+0.2
88,391	+		MPMX19_03848	0.87	-0.9
88,391	+		MPMX19_03848	0.87	-1.4
88,391	+		MPMX19_03848	0.87	-0.4
88,391	+		MPMX19_03848	0.87	+0.6
88,391	+		MPMX19_03848	0.87	-0.4
88,391	+		MPMX19_03848	0.87	+0.1
88,391	+		MPMX19_03848	0.87	-0.7
88,391	+		MPMX19_03848	0.87	+0.5
88,391	+		MPMX19_03848	0.87	+0.8
88,391	+		MPMX19_03848	0.87	-1.7
88,391	+		MPMX19_03848	0.87	-1.8
88,391	+		MPMX19_03848	0.87	+0.6
88,392	-		MPMX19_03848	0.87	+0.3
88,392	-		MPMX19_03848	0.87	-0.2
88,392	-		MPMX19_03848	0.87	-0.3
88,392	-		MPMX19_03848	0.87	+0.4
88,392	-		MPMX19_03848	0.87	+0.8
88,392	-		MPMX19_03848	0.87	-0.9
88,392	-		MPMX19_03848	0.87	-1.8
88,392	-		MPMX19_03848	0.87	-0.5
88,493	+				+1.1
88,493	+				+0.0
88,493	+				-1.9
88,493	+				+1.1
88,493	+				-0.0
88,493	+				+0.3
88,493	+				+0.1
88,493	+				+0.8
88,493	+				+0.6
88,493	+				+0.1
88,494	-				-0.4
88,494	-				-0.9
88,494	-				+0.1
88,494	-				-1.4
88,494	-				+0.4
88,494	-				-0.9
88,494	-				-1.4
88,712	+				+1.6
88,712	+				-0.2
88,712	+				-0.5
88,712	+				-0.8
88,713	-				-1.7
88,713	-				-1.9
88,713	-				+0.5
88,713	-				+0.7
88,817	+				+0.6
88,817	+				-1.8
88,817	+				-1.1
88,818	-				-1.9
88,865	+				-1.2
88,865	+				-0.5
88,866	-				+1.3
88,866	-				+0.1
88,942	+				+0.3
88,942	+				-2.1
88,942	+				-0.4
88,942	+				-0.3
88,942	+				-1.5
88,942	+				-0.4
88,942	+				+0.1
88,942	+				+0.5
88,942	+				-0.5
88,942	+				-1.7
88,942	+				-0.4
88,942	+				-0.4
88,942	+				-0.3
88,943	-				-1.8
88,943	-				+1.2
88,943	-				-0.4
88,943	-				+0.3
88,943	-				-0.9
88,943	-				+0.4
88,943	-				+0.2
88,943	-				+0.2
88,943	-				-2.6
88,943	-				-0.5
88,943	-				+1.6
88,943	-				-0.9
91,288	+				-0.1
91,288	+				-0.4
91,288	+				+0.1
91,288	+				-0.7
91,288	+				-1.2
91,288	+				-2.1
91,364	+				-1.1
91,364	+				-0.2
91,364	+				+1.1
91,364	+				-1.0
91,364	+				-0.4
91,364	+				-0.5
91,364	+				-0.5
91,364	+				-0.9
91,364	+				+0.8
91,365	-				+0.3
91,365	-				+0.1
91,512	+				-0.5
91,512	+				-1.7
91,512	+				-0.2
91,513	-				-0.9
91,757	+				+0.9
91,757	+				+0.7
91,757	+				-0.5
91,757	+				-0.8
91,757	+				+0.1
91,758	-				+0.1
91,758	-				-2.1
91,758	-				-0.5
91,758	-				+0.1
91,758	-				+0.1
91,758	-				+0.3
91,758	-				-0.5
91,988	+				-1.4
91,988	+				+0.1
91,989	-				-1.9
91,989	-				-0.1
91,989	-				-1.0
91,989	-				-0.9
91,989	-				-0.4
91,989	-				+1.3
92,018	+		MPMX19_03850	0.11	-0.1
92,018	+		MPMX19_03850	0.11	+0.1
92,018	+		MPMX19_03850	0.11	+1.2
92,019	-		MPMX19_03850	0.11	-0.3
92,042	+		MPMX19_03850	0.12	-0.4
92,042	+		MPMX19_03850	0.12	-0.6
92,043	-		MPMX19_03850	0.12	-2.1
92,043	-		MPMX19_03850	0.12	-0.4
92,096	+		MPMX19_03850	0.14	-0.1
92,175	+		MPMX19_03850	0.18	+1.0
92,175	+		MPMX19_03850	0.18	-0.2
92,176	-		MPMX19_03850	0.18	-0.2
92,176	-		MPMX19_03850	0.18	+3.0
92,176	-		MPMX19_03850	0.18	-0.8
92,176	-		MPMX19_03850	0.18	-0.9
92,176	-		MPMX19_03850	0.18	+0.5
92,176	-		MPMX19_03850	0.18	+0.6