Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03719

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,161,625	+		MPMX19_03718	0.56	+2.9
1,161,626	-		MPMX19_03718	0.56	+0.1
1,161,626	-		MPMX19_03718	0.56	-0.1
1,161,626	-		MPMX19_03718	0.56	+0.5
1,161,626	-		MPMX19_03718	0.56	-0.2
1,161,748	+		MPMX19_03718	0.63	+0.2
1,161,748	+		MPMX19_03718	0.63	+0.1
1,161,748	+		MPMX19_03718	0.63	+1.2
1,161,749	-		MPMX19_03718	0.63	+1.2
1,161,749	-		MPMX19_03718	0.63	-0.8
1,161,749	-		MPMX19_03718	0.63	-0.5
1,161,749	-		MPMX19_03718	0.63	+1.0
1,161,749	-		MPMX19_03718	0.63	-2.5
1,161,749	-		MPMX19_03718	0.63	-0.3
1,161,749	-		MPMX19_03718	0.63	-1.1
1,161,749	-		MPMX19_03718	0.63	-0.5
1,161,871	+		MPMX19_03718	0.70	+0.1
1,161,871	+		MPMX19_03718	0.70	-0.9
1,161,871	+		MPMX19_03718	0.70	+0.2
1,161,871	+		MPMX19_03718	0.70	-0.3
1,162,565	+				+0.1
1,162,565	+				-0.2
1,162,566	-				+0.1
1,162,566	-				+0.3
1,162,566	-				-0.0
1,162,566	-				+1.0
1,162,566	-				-0.1
1,162,620	+				-1.9
1,162,620	+				-0.0
1,162,620	+				+1.5
1,162,620	+				+0.0
1,162,620	+				-0.2
1,162,620	+				+0.9
1,162,620	+				+0.3
1,162,621	-				+0.4
1,162,621	-				-0.0
1,162,621	-				-1.5
1,162,621	-				-0.4
1,162,621	-				-1.6
1,162,711	+				-1.2
1,162,711	+				-1.0
1,162,711	+				+1.3
1,162,712	-				-0.9
1,162,712	-				-1.2
1,162,712	-				-0.1
1,162,712	-				-0.3
1,162,882	+		MPMX19_03719	0.16	-1.5
1,162,882	+		MPMX19_03719	0.16	+1.9
1,162,882	+		MPMX19_03719	0.16	-0.9
1,162,882	+		MPMX19_03719	0.16	-0.3
1,162,882	+		MPMX19_03719	0.16	-0.8
1,162,882	+		MPMX19_03719	0.16	+0.0
1,162,883	-		MPMX19_03719	0.17	+1.2
1,162,883	-		MPMX19_03719	0.17	-1.1
1,162,883	-		MPMX19_03719	0.17	+0.1
1,162,883	-		MPMX19_03719	0.17	+1.2
1,162,883	-		MPMX19_03719	0.17	+0.6
1,162,883	-		MPMX19_03719	0.17	-0.2
1,162,883	-		MPMX19_03719	0.17	-0.3
1,162,883	-		MPMX19_03719	0.17	+0.2
1,162,883	-		MPMX19_03719	0.17	-0.1
1,162,883	-		MPMX19_03719	0.17	-0.6
1,163,124	+		MPMX19_03719	0.29	+0.4
1,163,124	+		MPMX19_03719	0.29	-0.3
1,163,124	+		MPMX19_03719	0.29	-1.0
1,163,124	+		MPMX19_03719	0.29	+0.2
1,163,124	+		MPMX19_03719	0.29	+0.1
1,163,125	-		MPMX19_03719	0.29	-0.3
1,163,125	-		MPMX19_03719	0.29	-0.2
1,163,125	-		MPMX19_03719	0.29	-0.6
1,163,125	-		MPMX19_03719	0.29	-0.5
1,163,125	-		MPMX19_03719	0.29	-0.1
1,163,329	-		MPMX19_03719	0.40	-0.5
1,163,447	+		MPMX19_03719	0.47	-1.3
1,163,447	+		MPMX19_03719	0.47	-0.0
1,163,447	+		MPMX19_03719	0.47	-1.8
1,163,447	+		MPMX19_03719	0.47	-0.5
1,163,448	-		MPMX19_03719	0.47	+1.7
1,163,448	-		MPMX19_03719	0.47	-2.0
1,163,448	-		MPMX19_03719	0.47	+0.5
1,163,541	+		MPMX19_03719	0.52	+0.5
1,163,542	-		MPMX19_03719	0.52	-0.3
1,163,542	-		MPMX19_03719	0.52	+0.4
1,163,542	-		MPMX19_03719	0.52	+0.1
1,163,670	+		MPMX19_03719	0.59	+0.5
1,163,671	-		MPMX19_03719	0.59	+0.0
1,163,688	+		MPMX19_03719	0.60	-1.9
1,163,688	+		MPMX19_03719	0.60	-0.0
1,163,689	-		MPMX19_03719	0.60	+0.1
1,163,689	-		MPMX19_03719	0.60	-0.3
1,164,057	+		MPMX19_03719	0.79	-1.8
1,164,057	+		MPMX19_03719	0.79	-1.6
1,164,057	+		MPMX19_03719	0.79	+0.5
1,164,057	+		MPMX19_03719	0.79	-0.2
1,164,058	-		MPMX19_03719	0.79	-0.0
1,164,058	-		MPMX19_03719	0.79	+1.0
1,164,066	+		MPMX19_03719	0.80	+0.5
1,164,066	+		MPMX19_03719	0.80	-0.2
1,164,066	+		MPMX19_03719	0.80	+1.7
1,164,066	+		MPMX19_03719	0.80	-1.3
1,164,066	+		MPMX19_03719	0.80	+0.4
1,164,067	-		MPMX19_03719	0.80	-0.9
1,164,067	-		MPMX19_03719	0.80	-1.0
1,164,067	-		MPMX19_03719	0.80	-1.3
1,164,067	-		MPMX19_03719	0.80	-0.0
1,164,067	-		MPMX19_03719	0.80	+0.7
1,164,067	-		MPMX19_03719	0.80	+0.1
1,164,067	-		MPMX19_03719	0.80	-1.5
1,164,067	-		MPMX19_03719	0.80	-0.1
1,164,067	-		MPMX19_03719	0.80	-0.8
1,164,268	+				+1.2
1,164,268	+				+0.3
1,164,268	+				-1.0
1,164,269	-				+0.4
1,164,269	-				-0.1
1,164,269	-				-0.0
1,164,269	-				+0.7
1,164,269	-				-0.0
1,164,298	+				-0.6
1,164,298	+				-0.5
1,164,298	+				-0.7
1,164,299	-				+0.6
1,164,299	-				+0.9
1,164,299	-				-0.3
1,164,492	-				-2.2
1,164,612	-				-0.4
1,165,374	+				-1.5
1,165,374	+				-0.2
1,165,374	+				-1.2
1,165,374	+				-0.1
1,165,374	+				+0.3
1,165,375	-				-1.9
1,165,375	-				-0.7
1,165,375	-				-1.3
1,165,375	-				-0.0
1,165,375	-				-0.6