Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03711

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,149,848	+		MPMX19_03710	0.11	+0.1
1,149,848	+		MPMX19_03710	0.11	+0.5
1,149,849	-		MPMX19_03710	0.11	+0.0
1,149,849	-		MPMX19_03710	0.11	-1.5
1,149,849	-		MPMX19_03710	0.11	-0.0
1,149,980	+		MPMX19_03710	0.25	-0.1
1,149,980	+		MPMX19_03710	0.25	+0.7
1,149,980	+		MPMX19_03710	0.25	+0.1
1,149,981	-		MPMX19_03710	0.25	+0.7
1,150,119	+		MPMX19_03710	0.40	+1.0
1,150,183	+		MPMX19_03710	0.47	-0.3
1,150,184	-		MPMX19_03710	0.47	+0.8
1,150,470	-		MPMX19_03710	0.78	-0.7
1,150,642	+				+0.1
1,150,643	-				+1.4
1,150,643	-				-1.0
1,150,643	-				-1.4
1,150,746	-				-1.0
1,150,777	-				-0.4
1,150,777	-				-1.7
1,150,777	-				-0.8
1,150,930	+				-0.9
1,150,963	+		MPMX19_03711	0.11	-0.1
1,150,963	+		MPMX19_03711	0.11	-1.0
1,150,963	+		MPMX19_03711	0.11	-1.2
1,150,963	+		MPMX19_03711	0.11	-1.0
1,150,963	+		MPMX19_03711	0.11	+1.1
1,150,963	+		MPMX19_03711	0.11	-1.0
1,150,963	+		MPMX19_03711	0.11	+0.8
1,150,964	-		MPMX19_03711	0.11	-1.0
1,150,964	-		MPMX19_03711	0.11	+0.0
1,150,964	-		MPMX19_03711	0.11	+0.8
1,150,964	-		MPMX19_03711	0.11	-1.5
1,150,964	-		MPMX19_03711	0.11	+2.5
1,150,964	-		MPMX19_03711	0.11	-0.3
1,150,964	-		MPMX19_03711	0.11	-1.9
1,150,964	-		MPMX19_03711	0.11	-0.4
1,151,053	+		MPMX19_03711	0.17	-1.5
1,151,054	-		MPMX19_03711	0.17	+0.7
1,151,054	-		MPMX19_03711	0.17	-0.0
1,151,054	-		MPMX19_03711	0.17	-0.3
1,151,071	+		MPMX19_03711	0.18	+0.2
1,151,155	+		MPMX19_03711	0.24	+1.1
1,151,155	+		MPMX19_03711	0.24	-0.9
1,151,155	+		MPMX19_03711	0.24	-0.5
1,151,155	+		MPMX19_03711	0.24	-1.5
1,151,155	+		MPMX19_03711	0.24	+0.4
1,151,155	+		MPMX19_03711	0.24	-1.0
1,151,155	+		MPMX19_03711	0.24	+1.0
1,151,156	-		MPMX19_03711	0.24	-1.0
1,151,156	-		MPMX19_03711	0.24	+0.3
1,151,156	-		MPMX19_03711	0.24	-0.8
1,151,215	+		MPMX19_03711	0.27	-1.0
1,151,314	+		MPMX19_03711	0.34	+2.0
1,151,315	-		MPMX19_03711	0.34	-0.5
1,151,315	-		MPMX19_03711	0.34	-0.2
1,151,315	-		MPMX19_03711	0.34	+0.2
1,151,315	-		MPMX19_03711	0.34	-0.6
1,151,315	-		MPMX19_03711	0.34	+0.2
1,151,315	-		MPMX19_03711	0.34	-0.0
1,151,315	-		MPMX19_03711	0.34	+0.1
1,151,386	+		MPMX19_03711	0.39	-0.2
1,151,386	+		MPMX19_03711	0.39	-0.2
1,151,386	+		MPMX19_03711	0.39	-0.9
1,151,386	+		MPMX19_03711	0.39	+0.2
1,151,386	+		MPMX19_03711	0.39	-0.8
1,151,386	+		MPMX19_03711	0.39	-0.8
1,151,387	-		MPMX19_03711	0.39	+0.7
1,151,387	-		MPMX19_03711	0.39	-0.5
1,151,387	-		MPMX19_03711	0.39	-0.7
1,151,405	-		MPMX19_03711	0.40	-0.0
1,151,405	-		MPMX19_03711	0.40	+0.6
1,151,557	+		MPMX19_03711	0.50	-0.9
1,151,557	+		MPMX19_03711	0.50	-1.6
1,151,557	+		MPMX19_03711	0.50	-0.6
1,151,557	+		MPMX19_03711	0.50	-0.2
1,151,557	+		MPMX19_03711	0.50	+0.1
1,151,557	+		MPMX19_03711	0.50	+0.1
1,151,557	+		MPMX19_03711	0.50	+0.0
1,151,557	+		MPMX19_03711	0.50	-0.5
1,151,558	-		MPMX19_03711	0.50	+0.1
1,151,558	-		MPMX19_03711	0.50	-0.9
1,151,558	-		MPMX19_03711	0.50	+1.7
1,151,558	-		MPMX19_03711	0.50	-0.2
1,151,558	-		MPMX19_03711	0.50	+1.1
1,151,558	-		MPMX19_03711	0.50	-0.3
1,151,558	-		MPMX19_03711	0.50	-0.9
1,151,560	+		MPMX19_03711	0.50	+0.3
1,151,560	+		MPMX19_03711	0.50	+0.1
1,151,561	-		MPMX19_03711	0.50	-0.2
1,151,575	+		MPMX19_03711	0.51	-0.7
1,151,575	+		MPMX19_03711	0.51	+0.5
1,151,575	+		MPMX19_03711	0.51	-0.0
1,151,575	+		MPMX19_03711	0.51	-0.6
1,151,576	-		MPMX19_03711	0.51	-0.7
1,151,576	-		MPMX19_03711	0.51	-0.2
1,151,695	+		MPMX19_03711	0.59	-1.6
1,151,695	+		MPMX19_03711	0.59	+0.1
1,151,695	+		MPMX19_03711	0.59	-0.7
1,151,695	+		MPMX19_03711	0.59	-1.3
1,151,695	+		MPMX19_03711	0.59	-1.7
1,151,696	-		MPMX19_03711	0.59	+1.1
1,151,696	-		MPMX19_03711	0.59	-0.1
1,151,711	-		MPMX19_03711	0.60	-0.5
1,151,926	+		MPMX19_03711	0.74	+0.4
1,151,926	+		MPMX19_03711	0.74	-1.5
1,151,926	+		MPMX19_03711	0.74	-1.6
1,151,926	+		MPMX19_03711	0.74	-2.3
1,151,926	+		MPMX19_03711	0.74	-1.9
1,152,017	-		MPMX19_03711	0.79	-1.6
1,152,017	-		MPMX19_03711	0.79	+0.2
1,152,017	-		MPMX19_03711	0.79	-0.8
1,152,017	-		MPMX19_03711	0.79	-0.3
1,152,017	-		MPMX19_03711	0.79	+0.5
1,152,256	+				-0.0
1,152,256	+				-0.6
1,152,256	+				-0.4
1,152,256	+				-0.6
1,152,256	+				-1.1
1,152,256	+				+2.1
1,152,256	+				-0.3
1,152,256	+				+0.2
1,152,256	+				+0.2
1,152,256	+				+0.7
1,152,256	+				+0.1
1,152,256	+				-0.6
1,152,256	+				-0.1
1,152,256	+				-1.3
1,152,256	+				+0.8
1,152,256	+				+0.3
1,152,256	+				+0.7
1,152,256	+				-0.3
1,152,256	+				-0.6
1,152,256	+				+1.0
1,152,256	+				-0.6
1,152,256	+				+0.5
1,152,256	+				-0.8
1,152,256	+				-1.0
1,152,256	+				+0.3
1,152,256	+				+0.9
1,152,256	+				+0.5
1,152,256	+				-0.8
1,152,256	+				-0.5
1,152,256	+				-0.2
1,152,256	+				-0.1
1,152,257	-				-0.4
1,152,257	-				-0.5
1,152,257	-				-1.6
1,152,257	-				+0.7
1,152,257	-				+0.7
1,152,257	-				-0.8
1,152,257	-				+1.5
1,152,257	-				+1.9
1,152,257	-				+0.9
1,152,257	-				+0.5
1,152,257	-				+0.4
1,152,257	-				-0.3
1,152,257	-				+0.8
1,152,257	-				+0.5
1,152,257	-				-0.0
1,152,257	-				+0.2
1,152,257	-				-0.8
1,152,257	-				+0.0
1,152,257	-				-1.8
1,152,257	-				-1.5
1,152,257	-				+0.1
1,152,257	-				+0.4
1,152,257	-				-1.3
1,152,257	-				-2.0
1,152,257	-				-0.0
1,152,257	-				-0.5
1,152,257	-				-0.5
1,152,257	-				+0.4
1,152,257	-				-0.3
1,152,257	-				+0.5
1,152,257	-				+0.2
1,152,258	+				-0.3
1,152,258	+				-1.8
1,152,259	-				+0.5
1,152,259	-				-1.3
1,152,259	-				+0.1
1,152,259	-				-0.6
1,152,259	-				-0.0
1,152,259	-				-0.5
1,152,259	-				-0.8
1,152,259	-				+2.7
1,152,259	-				-1.1
1,152,259	-				+0.1
1,152,259	-				-0.3
1,152,259	-				-0.5
1,152,259	-				+0.2
1,152,331	+				+0.8
1,152,331	+				-0.5
1,152,332	-				+0.1
1,152,332	-				+0.5
1,152,332	-				-0.6
1,152,332	-				+0.5
1,152,605	+		MPMX19_03712	0.22	-0.5
1,152,869	+		MPMX19_03712	0.48	+1.9
1,152,869	+		MPMX19_03712	0.48	-1.3
1,152,869	+		MPMX19_03712	0.48	-0.4
1,152,870	-		MPMX19_03712	0.48	-0.0
1,152,870	-		MPMX19_03712	0.48	+1.5
1,153,073	+		MPMX19_03712	0.69	+0.2
1,153,073	+		MPMX19_03712	0.69	-0.9
1,153,073	+		MPMX19_03712	0.69	-0.5
1,153,073	+		MPMX19_03712	0.69	+0.2
1,153,073	+		MPMX19_03712	0.69	+0.2
1,153,073	+		MPMX19_03712	0.69	-0.0
1,153,073	+		MPMX19_03712	0.69	-0.5
1,153,073	+		MPMX19_03712	0.69	-0.5
1,153,073	+		MPMX19_03712	0.69	-0.0
1,153,073	+		MPMX19_03712	0.69	-0.3
1,153,073	+		MPMX19_03712	0.69	-0.1
1,153,073	+		MPMX19_03712	0.69	+1.3
1,153,073	+		MPMX19_03712	0.69	-2.2
1,153,073	+		MPMX19_03712	0.69	+0.1
1,153,073	+		MPMX19_03712	0.69	-1.2
1,153,074	-		MPMX19_03712	0.69	-0.6
1,153,074	-		MPMX19_03712	0.69	-0.1
1,153,074	-		MPMX19_03712	0.69	-0.2
1,153,074	-		MPMX19_03712	0.69	-0.3
1,153,074	-		MPMX19_03712	0.69	+0.2
1,153,074	-		MPMX19_03712	0.69	+0.9
1,153,074	-		MPMX19_03712	0.69	-0.8
1,153,094	+		MPMX19_03712	0.71	-0.3
1,153,094	+		MPMX19_03712	0.71	-0.3
1,153,094	+		MPMX19_03712	0.71	-0.3
1,153,095	-		MPMX19_03712	0.71	-0.8
1,153,109	+		MPMX19_03712	0.73	+0.3
1,153,109	+		MPMX19_03712	0.73	-0.9
1,153,110	-		MPMX19_03712	0.73	-0.6
1,153,110	-		MPMX19_03712	0.73	-0.3
1,153,129	+		MPMX19_03712	0.75	+1.0
1,153,129	+		MPMX19_03712	0.75	-1.3
1,153,129	+		MPMX19_03712	0.75	-0.0
1,153,130	-		MPMX19_03712	0.75	+0.5
1,153,130	-		MPMX19_03712	0.75	-0.5
1,153,148	+		MPMX19_03712	0.76	+0.5
1,153,172	+		MPMX19_03712	0.79	-0.9
1,153,172	+		MPMX19_03712	0.79	+0.2
1,153,173	-		MPMX19_03712	0.79	-1.3
1,153,173	-		MPMX19_03712	0.79	-1.5