Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03709

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,146,955	+				+0.4
1,146,955	+				-0.6
1,146,955	+				+1.3
1,146,955	+				-0.5
1,146,956	-				+0.1
1,146,956	-				-2.7
1,146,956	-				-0.3
1,146,956	-				+0.2
1,146,959	+				-0.5
1,146,959	+				+0.7
1,146,959	+				-1.8
1,146,959	+				-0.6
1,146,959	+				-0.9
1,146,959	+				-1.9
1,146,959	+				-0.8
1,146,959	+				+0.1
1,146,959	+				-0.0
1,146,959	+				+0.5
1,146,959	+				-0.3
1,146,959	+				+0.5
1,146,959	+				+0.1
1,146,959	+				-1.3
1,146,959	+				-0.8
1,146,959	+				-1.8
1,146,959	+				-0.6
1,146,959	+				-0.9
1,146,959	+				-1.1
1,146,959	+				-0.2
1,146,959	+				-0.0
1,146,959	+				-1.3
1,146,959	+				-0.4
1,146,959	+				-2.0
1,146,959	+				-0.8
1,146,959	+				-0.5
1,146,959	+				-0.6
1,146,959	+				-0.1
1,146,959	+				+1.5
1,146,959	+				+1.8
1,146,959	+				-0.5
1,146,959	+				-0.5
1,146,959	+				-0.1
1,146,960	-				+0.7
1,146,960	-				-1.0
1,146,960	-				-0.8
1,146,960	-				-0.5
1,146,960	-				-0.8
1,146,960	-				+1.0
1,146,960	-				-1.5
1,146,960	-				-0.0
1,146,960	-				-0.7
1,146,960	-				+0.3
1,146,960	-				-0.9
1,146,960	-				+0.2
1,146,960	-				+0.1
1,146,960	-				-0.0
1,146,960	-				+1.0
1,146,960	-				-2.5
1,146,960	-				-0.5
1,146,960	-				-0.5
1,146,960	-				+1.3
1,146,960	-				-0.5
1,146,960	-				+0.1
1,146,960	-				+1.0
1,146,960	-				-1.0
1,146,960	-				+0.4
1,146,960	-				-1.6
1,146,960	-				+2.1
1,146,960	-				+0.7
1,146,960	-				-0.0
1,146,960	-				+0.9
1,146,960	-				-0.9
1,146,960	-				-0.5
1,146,960	-				-0.5
1,146,960	-				+2.3
1,146,960	-				-0.0
1,146,960	-				+1.3
1,146,960	-				-0.6
1,146,960	-				-0.8
1,146,960	-				+1.0
1,147,005	+				-1.0
1,147,005	+				-0.4
1,147,005	+				+0.1
1,147,005	+				-0.0
1,147,005	+				-0.9
1,147,005	+				+1.0
1,147,005	+				+0.5
1,147,006	-				-1.0
1,147,006	-				+0.7
1,147,006	-				-1.4
1,147,006	-				-0.5
1,147,006	-				+2.5
1,147,006	-				-0.0
1,147,006	-				-2.4
1,147,006	-				-0.5
1,147,006	-				-0.4
1,147,041	+				-0.5
1,147,041	+				-0.2
1,147,041	+				-0.6
1,147,041	+				+0.5
1,147,041	+				-0.5
1,147,041	+				-0.8
1,147,041	+				-0.7
1,147,041	+				+0.3
1,147,041	+				-0.5
1,147,042	-				-0.0
1,147,042	-				+1.0
1,147,042	-				-0.3
1,147,042	-				-1.5
1,147,042	-				+0.5
1,147,042	-				+0.8
1,147,042	-				-0.2
1,147,042	-				+0.5
1,147,042	-				-1.8
1,147,172	+		MPMX19_03708	0.23	+0.2
1,147,172	+		MPMX19_03708	0.23	+0.5
1,147,172	+		MPMX19_03708	0.23	+0.3
1,147,173	-		MPMX19_03708	0.23	-0.6
1,147,185	+		MPMX19_03708	0.24	-0.6
1,147,185	+		MPMX19_03708	0.24	-0.0
1,147,185	+		MPMX19_03708	0.24	-1.3
1,147,185	+		MPMX19_03708	0.24	+0.3
1,147,185	+		MPMX19_03708	0.24	+0.1
1,147,186	-		MPMX19_03708	0.24	-0.9
1,147,386	+		MPMX19_03708	0.46	-1.8
1,147,386	+		MPMX19_03708	0.46	+1.8
1,147,387	-		MPMX19_03708	0.46	+0.5
1,147,387	-		MPMX19_03708	0.46	+1.1
1,147,387	-		MPMX19_03708	0.46	+1.3
1,147,387	-		MPMX19_03708	0.46	-0.1
1,147,387	-		MPMX19_03708	0.46	+0.2
1,147,387	-		MPMX19_03708	0.46	-0.5
1,147,387	-		MPMX19_03708	0.46	-0.5
1,147,387	-		MPMX19_03708	0.46	-1.3
1,147,687	-		MPMX19_03708	0.78	-1.2
1,147,740	+		MPMX19_03708	0.84	-1.0
1,147,740	+		MPMX19_03708	0.84	+0.9
1,147,740	+		MPMX19_03708	0.84	-1.4
1,147,740	+		MPMX19_03708	0.84	-0.0
1,147,740	+		MPMX19_03708	0.84	-0.5
1,147,740	+		MPMX19_03708	0.84	-2.6
1,147,740	+		MPMX19_03708	0.84	-0.9
1,147,740	+		MPMX19_03708	0.84	+1.5
1,147,740	+		MPMX19_03708	0.84	-1.9
1,147,740	+		MPMX19_03708	0.84	-0.2
1,147,740	+		MPMX19_03708	0.84	+0.7
1,147,740	+		MPMX19_03708	0.84	-1.5
1,147,741	-		MPMX19_03708	0.84	+0.5
1,147,741	-		MPMX19_03708	0.84	+0.3
1,147,741	-		MPMX19_03708	0.84	+0.2
1,147,741	-		MPMX19_03708	0.84	-0.6
1,147,741	-		MPMX19_03708	0.84	+1.0
1,147,741	-		MPMX19_03708	0.84	-0.1
1,147,741	-		MPMX19_03708	0.84	+0.1
1,147,741	-		MPMX19_03708	0.84	+0.1
1,147,741	-		MPMX19_03708	0.84	+0.1
1,147,741	-		MPMX19_03708	0.84	-0.2
1,147,741	-		MPMX19_03708	0.84	+0.1
1,147,741	-		MPMX19_03708	0.84	+0.7
1,147,741	-		MPMX19_03708	0.84	-1.8
1,147,741	-		MPMX19_03708	0.84	+0.3
1,147,741	-		MPMX19_03708	0.84	-2.1
1,147,741	-		MPMX19_03708	0.84	-0.4
1,147,741	-		MPMX19_03708	0.84	+0.8
1,147,863	+				-1.6
1,147,863	+				+0.5
1,147,863	+				-0.8
1,147,863	+				+0.4
1,147,863	+				-0.5
1,147,863	+				+0.3
1,147,864	-				-0.5
1,147,864	-				-0.3
1,147,864	-				-0.5
1,147,864	-				-0.1
1,148,389	-		MPMX19_03709	0.26	+0.0
1,148,529	+		MPMX19_03709	0.33	-1.5
1,148,529	+		MPMX19_03709	0.33	-0.5
1,148,529	+		MPMX19_03709	0.33	-0.3
1,148,529	+		MPMX19_03709	0.33	+0.3
1,148,529	+		MPMX19_03709	0.33	-1.0
1,148,529	+		MPMX19_03709	0.33	-0.5
1,148,529	+		MPMX19_03709	0.33	+1.0
1,148,529	+		MPMX19_03709	0.33	+0.4
1,148,529	+		MPMX19_03709	0.33	-0.5
1,148,529	+		MPMX19_03709	0.33	-1.3
1,148,530	-		MPMX19_03709	0.33	-0.3
1,148,530	-		MPMX19_03709	0.33	-0.9
1,148,530	-		MPMX19_03709	0.33	+0.7
1,148,530	-		MPMX19_03709	0.33	+0.8
1,148,530	-		MPMX19_03709	0.33	+0.7
1,148,530	-		MPMX19_03709	0.33	-2.2
1,148,530	-		MPMX19_03709	0.33	-0.3
1,148,530	-		MPMX19_03709	0.33	+0.6
1,148,530	-		MPMX19_03709	0.33	+1.7
1,148,530	-		MPMX19_03709	0.33	-0.6
1,148,530	-		MPMX19_03709	0.33	-0.3
1,148,556	+		MPMX19_03709	0.35	-1.6
1,148,556	+		MPMX19_03709	0.35	+0.5
1,148,557	-		MPMX19_03709	0.35	-0.0
1,148,557	-		MPMX19_03709	0.35	+0.4
1,148,557	-		MPMX19_03709	0.35	+1.0
1,148,680	-		MPMX19_03709	0.42	-0.6
1,148,892	+		MPMX19_03709	0.54	+0.4
1,148,892	+		MPMX19_03709	0.54	+1.3
1,148,892	+		MPMX19_03709	0.54	-1.0
1,148,892	+		MPMX19_03709	0.54	-0.5
1,148,893	-		MPMX19_03709	0.54	-1.0
1,148,893	-		MPMX19_03709	0.54	+0.5
1,148,893	-		MPMX19_03709	0.54	-0.8
1,148,893	-		MPMX19_03709	0.54	+0.5
1,148,893	-		MPMX19_03709	0.54	+0.5
1,148,893	-		MPMX19_03709	0.54	-0.2
1,148,895	+		MPMX19_03709	0.54	+1.8
1,148,895	+		MPMX19_03709	0.54	+0.4
1,148,895	+		MPMX19_03709	0.54	-0.7
1,148,895	+		MPMX19_03709	0.54	-1.1
1,148,895	+		MPMX19_03709	0.54	-0.6
1,148,895	+		MPMX19_03709	0.54	+0.1
1,148,895	+		MPMX19_03709	0.54	+1.0
1,148,895	+		MPMX19_03709	0.54	-1.5
1,148,895	+		MPMX19_03709	0.54	-0.6
1,148,895	+		MPMX19_03709	0.54	-1.3
1,148,896	-		MPMX19_03709	0.54	-1.0
1,148,896	-		MPMX19_03709	0.54	-1.0
1,148,896	-		MPMX19_03709	0.54	+0.0
1,148,896	-		MPMX19_03709	0.54	-0.5
1,148,896	-		MPMX19_03709	0.54	-1.0
1,148,896	-		MPMX19_03709	0.54	-1.0
1,148,896	-		MPMX19_03709	0.54	+0.7
1,148,896	-		MPMX19_03709	0.54	+0.9
1,148,896	-		MPMX19_03709	0.54	+0.3
1,148,896	-		MPMX19_03709	0.54	-2.0
1,149,441	+		MPMX19_03709	0.85	+0.5
1,149,442	-		MPMX19_03709	0.85	+0.4
1,149,442	-		MPMX19_03709	0.85	+0.2
1,149,666	+				+0.4
1,149,667	-				-0.0
1,149,667	-				+0.2
1,149,667	-				+0.5
1,149,709	+				-0.8
1,149,709	+				-1.3
1,149,709	+				-0.8
1,149,709	+				-0.9
1,149,709	+				+1.3
1,149,709	+				-1.3
1,149,709	-				-0.0
1,149,710	-				+1.3
1,149,710	-				-0.2
1,149,710	-				-0.2
1,149,710	-				-0.6
1,149,710	-				+1.1
1,149,710	-				+1.3
1,149,710	-				-2.4
1,149,710	-				-1.3
1,149,848	+		MPMX19_03710	0.11	+0.1
1,149,848	+		MPMX19_03710	0.11	+0.5
1,149,849	-		MPMX19_03710	0.11	+0.0
1,149,849	-		MPMX19_03710	0.11	-1.5
1,149,849	-		MPMX19_03710	0.11	-0.0
1,149,980	+		MPMX19_03710	0.25	-0.1
1,149,980	+		MPMX19_03710	0.25	+0.7
1,149,980	+		MPMX19_03710	0.25	+0.1
1,149,981	-		MPMX19_03710	0.25	+0.7
1,150,119	+		MPMX19_03710	0.40	+1.0
1,150,183	+		MPMX19_03710	0.47	-0.3
1,150,184	-		MPMX19_03710	0.47	+0.8
1,150,470	-		MPMX19_03710	0.78	-0.7
1,150,642	+				+0.1
1,150,643	-				+1.4
1,150,643	-				-1.0
1,150,643	-				-1.4