Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03632 and MPMX19_03633 are separated by 193 nucleotides MPMX19_03633 and MPMX19_03634 are separated by 19 nucleotides
MPMX19_03632: MPMX19_03632 - Sodium, potassium, lithium and rubidium/H(+) antiporter, at 1,067,278 to 1,068,882
_03632
MPMX19_03633: MPMX19_03633 - Ornithine cyclodeaminase, at 1,069,076 to 1,070,140
_03633
MPMX19_03634: MPMX19_03634 - Arginase, at 1,070,160 to 1,071,110
_03634
Position (kb)
1069
1070
1071 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.262 kb on + strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.263 kb on - strand, within MPMX19_03632 at 1068.308 kb on - strand, within MPMX19_03632 at 1068.643 kb on + strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.644 kb on - strand, within MPMX19_03632 at 1068.881 kb on - strand at 1068.932 kb on - strand at 1069.209 kb on + strand, within MPMX19_03633 at 1069.209 kb on + strand, within MPMX19_03633 at 1069.209 kb on + strand, within MPMX19_03633 at 1069.210 kb on - strand, within MPMX19_03633 at 1069.210 kb on - strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.506 kb on + strand, within MPMX19_03633 at 1069.507 kb on - strand, within MPMX19_03633 at 1069.507 kb on - strand, within MPMX19_03633 at 1069.507 kb on - strand, within MPMX19_03633 at 1069.645 kb on - strand, within MPMX19_03633 at 1069.645 kb on - strand, within MPMX19_03633 at 1069.645 kb on - strand, within MPMX19_03633 at 1069.830 kb on + strand, within MPMX19_03633 at 1069.914 kb on + strand, within MPMX19_03633 at 1069.914 kb on + strand, within MPMX19_03633 at 1069.915 kb on - strand, within MPMX19_03633 at 1069.926 kb on + strand, within MPMX19_03633 at 1069.926 kb on + strand, within MPMX19_03633 at 1069.927 kb on - strand, within MPMX19_03633 at 1069.927 kb on - strand, within MPMX19_03633 at 1070.038 kb on - strand at 1070.038 kb on - strand at 1070.038 kb on - strand at 1070.179 kb on + strand at 1070.180 kb on - strand at 1070.614 kb on + strand, within MPMX19_03634 at 1070.614 kb on + strand, within MPMX19_03634 at 1070.615 kb on - strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.644 kb on + strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.645 kb on - strand, within MPMX19_03634 at 1070.845 kb on + strand, within MPMX19_03634 at 1070.846 kb on - strand, within MPMX19_03634 at 1070.846 kb on - strand, within MPMX19_03634 at 1071.104 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 1,068,262 + MPMX19_03632 0.61 +0.5 1,068,262 + MPMX19_03632 0.61 +0.7 1,068,262 + MPMX19_03632 0.61 -0.1 1,068,262 + MPMX19_03632 0.61 +0.1 1,068,262 + MPMX19_03632 0.61 +0.9 1,068,263 - MPMX19_03632 0.61 -0.0 1,068,263 - MPMX19_03632 0.61 -1.4 1,068,263 - MPMX19_03632 0.61 -0.8 1,068,263 - MPMX19_03632 0.61 +0.2 1,068,263 - MPMX19_03632 0.61 -0.2 1,068,263 - MPMX19_03632 0.61 -0.0 1,068,263 - MPMX19_03632 0.61 -0.6 1,068,263 - MPMX19_03632 0.61 +1.2 1,068,263 - MPMX19_03632 0.61 -0.6 1,068,263 - MPMX19_03632 0.61 -0.3 1,068,263 - MPMX19_03632 0.61 -0.8 1,068,308 - MPMX19_03632 0.64 -1.8 1,068,643 + MPMX19_03632 0.85 +1.1 1,068,644 - MPMX19_03632 0.85 +0.5 1,068,644 - MPMX19_03632 0.85 -1.7 1,068,644 - MPMX19_03632 0.85 -0.8 1,068,644 - MPMX19_03632 0.85 -0.9 1,068,881 - +1.4 1,068,932 - -0.5 1,069,209 + MPMX19_03633 0.12 -0.2 1,069,209 + MPMX19_03633 0.12 +1.0 1,069,209 + MPMX19_03633 0.12 +1.5 1,069,210 - MPMX19_03633 0.13 -2.2 1,069,210 - MPMX19_03633 0.13 -1.6 1,069,506 + MPMX19_03633 0.40 -1.5 1,069,506 + MPMX19_03633 0.40 -0.2 1,069,506 + MPMX19_03633 0.40 -0.5 1,069,506 + MPMX19_03633 0.40 -0.6 1,069,506 + MPMX19_03633 0.40 -0.0 1,069,506 + MPMX19_03633 0.40 -0.4 1,069,506 + MPMX19_03633 0.40 -0.1 1,069,507 - MPMX19_03633 0.40 -0.2 1,069,507 - MPMX19_03633 0.40 +0.1 1,069,507 - MPMX19_03633 0.40 -1.9 1,069,645 - MPMX19_03633 0.53 -0.7 1,069,645 - MPMX19_03633 0.53 -0.8 1,069,645 - MPMX19_03633 0.53 -0.9 1,069,830 + MPMX19_03633 0.71 +0.1 1,069,914 + MPMX19_03633 0.79 +0.4 1,069,914 + MPMX19_03633 0.79 -1.2 1,069,915 - MPMX19_03633 0.79 -0.0 1,069,926 + MPMX19_03633 0.80 -0.7 1,069,926 + MPMX19_03633 0.80 -0.6 1,069,927 - MPMX19_03633 0.80 -0.8 1,069,927 - MPMX19_03633 0.80 +0.4 1,070,038 - +0.3 1,070,038 - +0.4 1,070,038 - -0.2 1,070,179 + -0.6 1,070,180 - -0.4 1,070,614 + MPMX19_03634 0.48 +0.5 1,070,614 + MPMX19_03634 0.48 +0.1 1,070,615 - MPMX19_03634 0.48 +3.1 1,070,644 + MPMX19_03634 0.51 +1.2 1,070,644 + MPMX19_03634 0.51 -2.7 1,070,644 + MPMX19_03634 0.51 -0.5 1,070,644 + MPMX19_03634 0.51 +0.5 1,070,644 + MPMX19_03634 0.51 -0.0 1,070,645 - MPMX19_03634 0.51 +0.7 1,070,645 - MPMX19_03634 0.51 -0.5 1,070,645 - MPMX19_03634 0.51 +0.5 1,070,645 - MPMX19_03634 0.51 -1.3 1,070,645 - MPMX19_03634 0.51 +2.5 1,070,645 - MPMX19_03634 0.51 +1.0 1,070,645 - MPMX19_03634 0.51 -0.5 1,070,845 + MPMX19_03634 0.72 +0.8 1,070,846 - MPMX19_03634 0.72 +0.4 1,070,846 - MPMX19_03634 0.72 +0.2 1,071,104 - +0.2
Or see this region's nucleotide sequence