Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03632

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,066,447	-		MPMX19_03630	0.88	-0.0
1,066,515	-				-0.5
1,066,517	+				-1.0
1,066,517	+				+0.0
1,066,517	+				+0.2
1,066,517	+				-0.8
1,066,517	+				-0.3
1,066,517	+				-0.3
1,066,517	+				+0.3
1,066,517	+				+0.1
1,066,517	+				+0.0
1,066,517	+				-1.6
1,066,517	+				-0.7
1,066,518	-				+0.0
1,066,518	-				+0.1
1,066,518	-				+1.1
1,066,518	-				-0.8
1,066,518	-				+1.2
1,066,518	-				+0.1
1,066,518	-				+0.2
1,066,518	-				-0.1
1,066,518	-				-0.0
1,066,518	-				-1.8
1,066,518	-				-0.8
1,066,518	-				-1.8
1,066,518	-				-0.6
1,066,518	-				+1.0
1,066,518	-				-0.8
1,066,518	-				+0.3
1,066,518	-				+0.3
1,066,518	-				-1.1
1,066,518	-				-0.0
1,066,518	-				+0.2
1,066,616	+				+0.1
1,066,617	-				+0.1
1,066,617	-				+0.4
1,066,874	+		MPMX19_03631	0.23	-1.8
1,066,874	+		MPMX19_03631	0.23	-0.8
1,066,875	-		MPMX19_03631	0.23	+2.1
1,067,144	-		MPMX19_03631	0.83	-0.5
1,067,216	+				+0.5
1,067,477	+		MPMX19_03632	0.12	-0.8
1,067,477	+		MPMX19_03632	0.12	+0.4
1,067,478	-		MPMX19_03632	0.12	+1.1
1,067,491	+		MPMX19_03632	0.13	+1.0
1,067,491	+		MPMX19_03632	0.13	-0.6
1,067,491	+		MPMX19_03632	0.13	+0.2
1,067,491	+		MPMX19_03632	0.13	-1.2
1,067,492	-		MPMX19_03632	0.13	+0.1
1,067,492	-		MPMX19_03632	0.13	-0.1
1,067,597	+		MPMX19_03632	0.20	+0.2
1,067,597	+		MPMX19_03632	0.20	+1.1
1,067,597	+		MPMX19_03632	0.20	-0.4
1,067,597	+		MPMX19_03632	0.20	-0.1
1,067,597	+		MPMX19_03632	0.20	-0.0
1,067,597	+		MPMX19_03632	0.20	-0.5
1,067,597	+		MPMX19_03632	0.20	+0.1
1,067,597	+		MPMX19_03632	0.20	-0.2
1,067,597	+		MPMX19_03632	0.20	+0.7
1,067,598	-		MPMX19_03632	0.20	-0.8
1,067,598	-		MPMX19_03632	0.20	-0.1
1,067,598	-		MPMX19_03632	0.20	-2.2
1,067,598	-		MPMX19_03632	0.20	+0.7
1,067,598	-		MPMX19_03632	0.20	-0.0
1,067,598	-		MPMX19_03632	0.20	-1.1
1,067,598	-		MPMX19_03632	0.20	+0.5
1,067,959	+		MPMX19_03632	0.42	+0.7
1,067,959	+		MPMX19_03632	0.42	+0.1
1,067,959	+		MPMX19_03632	0.42	+0.4
1,067,959	+		MPMX19_03632	0.42	-0.4
1,067,959	+		MPMX19_03632	0.42	+0.7
1,067,959	+		MPMX19_03632	0.42	-0.3
1,067,960	-		MPMX19_03632	0.42	+0.2
1,067,960	-		MPMX19_03632	0.42	+1.3
1,067,960	-		MPMX19_03632	0.42	+0.4
1,067,960	-		MPMX19_03632	0.42	-0.9
1,067,960	-		MPMX19_03632	0.42	+0.5
1,067,960	-		MPMX19_03632	0.42	-0.6
1,067,960	-		MPMX19_03632	0.42	+0.1
1,067,960	-		MPMX19_03632	0.42	-1.9
1,067,960	-		MPMX19_03632	0.42	-0.4
1,067,960	-		MPMX19_03632	0.42	-0.9
1,067,960	-		MPMX19_03632	0.42	+1.1
1,068,262	+		MPMX19_03632	0.61	+0.5
1,068,262	+		MPMX19_03632	0.61	+0.7
1,068,262	+		MPMX19_03632	0.61	-0.1
1,068,262	+		MPMX19_03632	0.61	+0.1
1,068,262	+		MPMX19_03632	0.61	+0.9
1,068,263	-		MPMX19_03632	0.61	-0.0
1,068,263	-		MPMX19_03632	0.61	-1.4
1,068,263	-		MPMX19_03632	0.61	-0.8
1,068,263	-		MPMX19_03632	0.61	+0.2
1,068,263	-		MPMX19_03632	0.61	-0.2
1,068,263	-		MPMX19_03632	0.61	-0.0
1,068,263	-		MPMX19_03632	0.61	-0.6
1,068,263	-		MPMX19_03632	0.61	+1.2
1,068,263	-		MPMX19_03632	0.61	-0.6
1,068,263	-		MPMX19_03632	0.61	-0.3
1,068,263	-		MPMX19_03632	0.61	-0.8
1,068,308	-		MPMX19_03632	0.64	-1.8
1,068,643	+		MPMX19_03632	0.85	+1.1
1,068,644	-		MPMX19_03632	0.85	+0.5
1,068,644	-		MPMX19_03632	0.85	-1.7
1,068,644	-		MPMX19_03632	0.85	-0.8
1,068,644	-		MPMX19_03632	0.85	-0.9
1,068,881	-				+1.4
1,068,932	-				-0.5
1,069,209	+		MPMX19_03633	0.12	-0.2
1,069,209	+		MPMX19_03633	0.12	+1.0
1,069,209	+		MPMX19_03633	0.12	+1.5
1,069,210	-		MPMX19_03633	0.13	-2.2
1,069,210	-		MPMX19_03633	0.13	-1.6
1,069,506	+		MPMX19_03633	0.40	-1.5
1,069,506	+		MPMX19_03633	0.40	-0.2
1,069,506	+		MPMX19_03633	0.40	-0.5
1,069,506	+		MPMX19_03633	0.40	-0.6
1,069,506	+		MPMX19_03633	0.40	-0.0
1,069,506	+		MPMX19_03633	0.40	-0.4
1,069,506	+		MPMX19_03633	0.40	-0.1
1,069,507	-		MPMX19_03633	0.40	-0.2
1,069,507	-		MPMX19_03633	0.40	+0.1
1,069,507	-		MPMX19_03633	0.40	-1.9
1,069,645	-		MPMX19_03633	0.53	-0.7
1,069,645	-		MPMX19_03633	0.53	-0.8
1,069,645	-		MPMX19_03633	0.53	-0.9
1,069,830	+		MPMX19_03633	0.71	+0.1