Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03614

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,042,079	+		MPMX19_03613	0.23	-0.5
1,042,080	-		MPMX19_03613	0.23	+0.5
1,042,307	+		MPMX19_03613	0.43	+0.7
1,042,307	+		MPMX19_03613	0.43	-0.0
1,042,307	+		MPMX19_03613	0.43	+1.5
1,042,307	+		MPMX19_03613	0.43	-0.5
1,042,308	-		MPMX19_03613	0.43	-0.8
1,042,374	+		MPMX19_03613	0.48	-2.2
1,042,374	+		MPMX19_03613	0.48	+1.3
1,042,374	+		MPMX19_03613	0.48	-1.5
1,042,374	+		MPMX19_03613	0.48	-0.8
1,042,375	-		MPMX19_03613	0.49	-0.5
1,042,375	-		MPMX19_03613	0.49	+2.0
1,042,375	-		MPMX19_03613	0.49	+1.5
1,042,375	-		MPMX19_03613	0.49	+1.5
1,042,375	-		MPMX19_03613	0.49	-0.6
1,043,044	+				+0.5
1,043,044	+				-1.4
1,043,044	+				-0.2
1,043,044	+				-0.3
1,043,044	+				+0.0
1,043,045	-				-0.4
1,043,045	-				+0.3
1,043,045	-				+0.2
1,043,045	-				+2.0
1,043,045	-				-1.3
1,043,045	-				-1.5
1,043,056	+				-0.9
1,043,056	+				-1.5
1,043,057	-				+0.1
1,043,057	-				-1.8
1,043,380	+		MPMX19_03614	0.38	+0.6
1,043,380	+		MPMX19_03614	0.38	+0.4
1,043,380	+		MPMX19_03614	0.38	-0.3
1,043,380	+		MPMX19_03614	0.38	-1.0
1,043,380	+		MPMX19_03614	0.38	+1.0
1,043,381	-		MPMX19_03614	0.38	+0.1
1,043,381	-		MPMX19_03614	0.38	-1.3
1,043,381	-		MPMX19_03614	0.38	-0.5
1,043,381	-		MPMX19_03614	0.38	+0.8
1,043,381	-		MPMX19_03614	0.38	+0.0
1,043,381	-		MPMX19_03614	0.38	-0.8
1,043,381	-		MPMX19_03614	0.38	-0.3
1,043,381	-		MPMX19_03614	0.38	-0.2
1,043,518	+		MPMX19_03614	0.51	-1.3
1,043,518	+		MPMX19_03614	0.51	+0.2
1,043,518	+		MPMX19_03614	0.51	+0.3
1,043,518	+		MPMX19_03614	0.51	-2.0
1,043,518	+		MPMX19_03614	0.51	-1.5
1,043,519	-		MPMX19_03614	0.51	-0.2
1,043,519	-		MPMX19_03614	0.51	-2.0
1,043,519	-		MPMX19_03614	0.51	+0.0
1,043,519	-		MPMX19_03614	0.51	-0.0
1,043,519	-		MPMX19_03614	0.51	-0.3
1,043,519	-		MPMX19_03614	0.51	+0.8
1,043,519	-		MPMX19_03614	0.51	-1.0
1,043,755	+		MPMX19_03614	0.73	-1.0
1,043,755	+		MPMX19_03614	0.73	+1.2
1,043,755	+		MPMX19_03614	0.73	-0.0
1,043,755	+		MPMX19_03614	0.73	+0.4
1,043,756	-		MPMX19_03614	0.73	+0.2
1,043,818	+		MPMX19_03614	0.79	+0.7
1,043,818	+		MPMX19_03614	0.79	-0.4
1,043,818	+		MPMX19_03614	0.79	+0.0
1,043,818	+		MPMX19_03614	0.79	+0.5
1,043,818	+		MPMX19_03614	0.79	-0.5
1,043,819	-		MPMX19_03614	0.79	+0.3
1,043,819	-		MPMX19_03614	0.79	+1.5
1,043,819	-		MPMX19_03614	0.79	+0.7
1,043,828	-		MPMX19_03614	0.80	-0.5
1,043,828	-		MPMX19_03614	0.80	-1.1
1,044,582	+		MPMX19_03615	0.20	+0.1
1,044,582	+		MPMX19_03615	0.20	-0.5
1,044,582	+		MPMX19_03615	0.20	-0.0
1,044,582	+		MPMX19_03615	0.20	-0.2
1,044,582	+		MPMX19_03615	0.20	+0.5
1,044,583	-		MPMX19_03615	0.20	-0.9
1,044,583	-		MPMX19_03615	0.20	-0.2
1,044,583	-		MPMX19_03615	0.20	+0.5
1,044,583	-		MPMX19_03615	0.20	+0.2
1,044,882	+		MPMX19_03615	0.37	-0.5
1,044,882	+		MPMX19_03615	0.37	+0.7
1,044,882	+		MPMX19_03615	0.37	-0.4
1,044,883	-		MPMX19_03615	0.37	+0.3
1,044,883	-		MPMX19_03615	0.37	+0.2
1,044,897	+		MPMX19_03615	0.38	-0.6
1,044,897	+		MPMX19_03615	0.38	+0.5
1,044,897	+		MPMX19_03615	0.38	-1.5
1,044,897	+		MPMX19_03615	0.38	-0.6
1,044,897	+		MPMX19_03615	0.38	+1.1
1,044,897	+		MPMX19_03615	0.38	-1.2
1,044,897	+		MPMX19_03615	0.38	-0.6
1,044,897	+		MPMX19_03615	0.38	+0.4
1,044,897	+		MPMX19_03615	0.38	+1.4
1,044,897	+		MPMX19_03615	0.38	+1.5
1,044,897	+		MPMX19_03615	0.38	+1.2
1,044,897	+		MPMX19_03615	0.38	+0.9
1,044,897	+		MPMX19_03615	0.38	-0.2
1,044,897	+		MPMX19_03615	0.38	+0.3
1,044,897	+		MPMX19_03615	0.38	+0.3
1,044,897	+		MPMX19_03615	0.38	+1.5
1,044,897	+		MPMX19_03615	0.38	-0.3
1,044,897	+		MPMX19_03615	0.38	-0.8
1,044,897	+		MPMX19_03615	0.38	+0.7
1,044,897	+		MPMX19_03615	0.38	+0.2
1,044,897	+		MPMX19_03615	0.38	-0.3
1,044,898	-		MPMX19_03615	0.38	+0.1
1,044,898	-		MPMX19_03615	0.38	-1.3
1,044,898	-		MPMX19_03615	0.38	-1.2
1,044,898	-		MPMX19_03615	0.38	+0.7
1,044,898	-		MPMX19_03615	0.38	-0.5
1,044,898	-		MPMX19_03615	0.38	-2.2
1,044,898	-		MPMX19_03615	0.38	-0.3
1,044,898	-		MPMX19_03615	0.38	-1.2
1,044,898	-		MPMX19_03615	0.38	+0.5
1,044,898	-		MPMX19_03615	0.38	-3.0
1,044,898	-		MPMX19_03615	0.38	-0.0
1,044,900	+		MPMX19_03615	0.38	-1.7
1,044,900	+		MPMX19_03615	0.38	+0.8
1,044,900	+		MPMX19_03615	0.38	+1.3
1,044,900	+		MPMX19_03615	0.38	+0.1
1,044,900	+		MPMX19_03615	0.38	-0.5
1,044,900	+		MPMX19_03615	0.38	+0.5
1,044,900	+		MPMX19_03615	0.38	-0.9
1,044,900	+		MPMX19_03615	0.38	+0.0
1,044,900	+		MPMX19_03615	0.38	-0.5
1,044,901	-		MPMX19_03615	0.38	-1.0
1,044,901	-		MPMX19_03615	0.38	-1.0
1,044,901	-		MPMX19_03615	0.38	-0.5
1,044,901	-		MPMX19_03615	0.38	-1.5
1,044,901	-		MPMX19_03615	0.38	-0.2
1,044,901	-		MPMX19_03615	0.38	+0.3
1,044,901	-		MPMX19_03615	0.38	-0.9
1,044,901	-		MPMX19_03615	0.38	-0.7
1,044,901	-		MPMX19_03615	0.38	-1.5
1,044,901	-		MPMX19_03615	0.38	+1.8
1,044,901	-		MPMX19_03615	0.38	-1.0
1,044,901	-		MPMX19_03615	0.38	+1.8
1,044,901	-		MPMX19_03615	0.38	+0.4
1,044,901	-		MPMX19_03615	0.38	+0.5
1,044,901	-		MPMX19_03615	0.38	-0.3
1,044,901	-		MPMX19_03615	0.38	-2.0
1,044,912	+		MPMX19_03615	0.39	+0.3
1,044,912	+		MPMX19_03615	0.39	+0.3
1,044,912	+		MPMX19_03615	0.39	-0.0
1,044,913	-		MPMX19_03615	0.39	+0.4
1,044,913	-		MPMX19_03615	0.39	+0.7
1,044,913	-		MPMX19_03615	0.39	-1.5
1,044,913	-		MPMX19_03615	0.39	+0.1
1,045,015	+		MPMX19_03615	0.44	+0.8
1,045,016	-		MPMX19_03615	0.44	-1.7