Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03593

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,018,211	+		MPMX19_03592	0.81	+0.3
1,018,211	+		MPMX19_03592	0.81	-2.3
1,018,211	+		MPMX19_03592	0.81	+0.1
1,018,211	+		MPMX19_03592	0.81	+0.0
1,018,211	+		MPMX19_03592	0.81	-0.2
1,018,211	+		MPMX19_03592	0.81	-0.1
1,018,211	+		MPMX19_03592	0.81	-0.8
1,018,211	+		MPMX19_03592	0.81	-1.8
1,018,211	+		MPMX19_03592	0.81	+1.8
1,018,211	+		MPMX19_03592	0.81	+0.2
1,018,211	+		MPMX19_03592	0.81	-0.1
1,018,212	-		MPMX19_03592	0.81	+0.6
1,018,212	-		MPMX19_03592	0.81	+0.1
1,018,212	-		MPMX19_03592	0.81	+0.7
1,018,212	-		MPMX19_03592	0.81	-0.2
1,018,212	-		MPMX19_03592	0.81	-1.1
1,018,212	-		MPMX19_03592	0.81	-0.8
1,018,212	-		MPMX19_03592	0.81	+0.1
1,018,212	-		MPMX19_03592	0.81	-1.0
1,018,212	-		MPMX19_03592	0.81	+0.5
1,018,212	-		MPMX19_03592	0.81	-1.3
1,018,212	-		MPMX19_03592	0.81	-0.1
1,018,212	-		MPMX19_03592	0.81	-0.2
1,018,212	-		MPMX19_03592	0.81	-0.5
1,018,212	-		MPMX19_03592	0.81	+0.8
1,018,212	-		MPMX19_03592	0.81	+0.3
1,018,212	-		MPMX19_03592	0.81	+0.8
1,018,212	-		MPMX19_03592	0.81	+0.7
1,018,212	-		MPMX19_03592	0.81	-0.2
1,018,212	-		MPMX19_03592	0.81	-2.0
1,018,213	+		MPMX19_03592	0.81	+0.7
1,018,213	+		MPMX19_03592	0.81	-1.5
1,018,213	+		MPMX19_03592	0.81	+0.2
1,018,213	+		MPMX19_03592	0.81	+0.8
1,018,213	+		MPMX19_03592	0.81	-0.2
1,018,213	+		MPMX19_03592	0.81	+0.1
1,018,213	+		MPMX19_03592	0.81	+0.2
1,018,214	-		MPMX19_03592	0.81	+1.5
1,018,214	-		MPMX19_03592	0.81	-0.4
1,018,214	-		MPMX19_03592	0.81	+0.1
1,018,214	-		MPMX19_03592	0.81	+0.3
1,018,279	+		MPMX19_03592	0.84	+0.5
1,018,279	+		MPMX19_03592	0.84	-2.4
1,018,279	+		MPMX19_03592	0.84	-1.7
1,018,280	-		MPMX19_03592	0.84	+0.2
1,018,280	-		MPMX19_03592	0.84	-0.2
1,018,280	-		MPMX19_03592	0.84	-2.9
1,018,441	+				-0.8
1,018,442	-				-0.3
1,018,442	-				+0.2
1,018,480	+				-0.1
1,018,481	-				-1.8
1,018,481	-				+0.5
1,018,625	+				+1.1
1,018,625	+				+0.5
1,018,625	+				-2.6
1,018,626	-				-0.5
1,018,657	-				-0.3
1,018,657	-				-0.2
1,018,657	-				-0.1
1,018,657	-				-1.3
1,018,657	-				+0.2
1,018,657	-				-1.3
1,018,657	-				-0.1
1,018,686	+				-0.3
1,018,687	-				+0.8
1,018,687	-				+0.4
1,018,742	-				+0.7
1,018,742	-				+0.4
1,018,820	+				+0.5
1,018,821	-				+0.5
1,018,859	-				-1.6
1,018,885	-				-1.8
1,018,904	+				-1.1
1,018,968	+				+0.7
1,018,976	+				-0.7
1,019,022	+				+0.8
1,019,390	+		MPMX19_03593	0.30	-0.3
1,019,390	+		MPMX19_03593	0.30	+0.9
1,019,391	-		MPMX19_03593	0.30	-0.5
1,019,633	+		MPMX19_03593	0.65	+0.0
1,019,633	+		MPMX19_03593	0.65	+0.2
1,019,633	+		MPMX19_03593	0.65	+0.4
1,019,633	+		MPMX19_03593	0.65	-1.4
1,019,633	+		MPMX19_03593	0.65	+0.4
1,019,634	-		MPMX19_03593	0.65	-0.1
1,019,634	-		MPMX19_03593	0.65	-0.1
1,019,634	-		MPMX19_03593	0.65	-0.6
1,019,634	-		MPMX19_03593	0.65	-0.5
1,019,634	-		MPMX19_03593	0.65	+0.5
1,019,634	-		MPMX19_03593	0.65	+1.0
1,019,634	-		MPMX19_03593	0.65	+0.9
1,019,634	-		MPMX19_03593	0.65	-1.6
1,019,634	-		MPMX19_03593	0.65	-1.2
1,019,634	-		MPMX19_03593	0.65	+0.1
1,019,636	+		MPMX19_03593	0.65	+0.2
1,019,637	-		MPMX19_03593	0.65	+0.2
1,019,637	-		MPMX19_03593	0.65	+0.2
1,019,738	+		MPMX19_03593	0.80	-1.6
1,019,738	+		MPMX19_03593	0.80	+0.0
1,019,738	+		MPMX19_03593	0.80	+0.2
1,019,738	+		MPMX19_03593	0.80	+0.1
1,019,738	+		MPMX19_03593	0.80	-0.5
1,019,739	-		MPMX19_03593	0.80	-0.1
1,019,739	-		MPMX19_03593	0.80	+1.0
1,019,739	-		MPMX19_03593	0.80	+0.5
1,019,739	-		MPMX19_03593	0.80	-1.9
1,019,739	-		MPMX19_03593	0.80	-0.2
1,019,739	-		MPMX19_03593	0.80	-1.0
1,019,873	+				-0.7
1,019,873	+				-0.2
1,019,997	-				-2.5
1,020,095	+				+0.6
1,020,095	+				+0.1
1,020,095	+				-1.2
1,020,095	+				-1.8
1,020,095	+				+1.1
1,020,095	+				-1.1
1,020,095	+				+0.2
1,020,096	-				-0.7
1,020,096	-				-0.2
1,020,096	-				-0.2
1,020,096	-				+0.1
1,020,162	+				-1.5
1,020,162	+				+0.2
1,020,162	+				-0.8
1,020,162	+				-0.3
1,020,162	+				-0.3
1,020,162	+				+0.6
1,020,162	+				+0.3
1,020,163	-				+0.4
1,020,163	-				+0.5
1,020,163	-				-0.5
1,020,163	-				+0.2
1,020,165	+				+0.1
1,020,166	-				-1.4
1,020,166	-				-0.1
1,020,166	-				-0.3
1,020,166	-				-0.1
1,020,229	-				-0.6
1,020,229	-				+1.4
1,020,481	-		MPMX19_03594	0.27	-0.4
1,020,537	+		MPMX19_03594	0.31	+0.9
1,020,537	+		MPMX19_03594	0.31	+0.5
1,020,564	+		MPMX19_03594	0.33	-0.3
1,020,564	+		MPMX19_03594	0.33	+0.3
1,020,564	+		MPMX19_03594	0.33	+0.2
1,020,565	-		MPMX19_03594	0.33	+0.5
1,020,565	-		MPMX19_03594	0.33	+0.6
1,020,565	-		MPMX19_03594	0.33	+0.5
1,020,565	-		MPMX19_03594	0.33	-1.5
1,020,565	-		MPMX19_03594	0.33	-1.5
1,020,565	-		MPMX19_03594	0.33	+0.2
1,020,714	+		MPMX19_03594	0.43	-0.9
1,020,714	+		MPMX19_03594	0.43	+0.8
1,020,714	+		MPMX19_03594	0.43	-0.5
1,020,714	+		MPMX19_03594	0.43	+0.2
1,020,714	+		MPMX19_03594	0.43	+0.5
1,020,714	+		MPMX19_03594	0.43	+0.2
1,020,714	+		MPMX19_03594	0.43	+0.1
1,020,715	-		MPMX19_03594	0.44	-0.6
1,020,715	-		MPMX19_03594	0.44	-0.6
1,020,715	-		MPMX19_03594	0.44	+0.9
1,020,715	-		MPMX19_03594	0.44	-0.3
1,020,829	-		MPMX19_03594	0.52	-1.3
1,020,829	-		MPMX19_03594	0.52	-0.3
1,020,829	-		MPMX19_03594	0.52	+0.4
1,020,829	-		MPMX19_03594	0.52	-1.4