Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03588

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,012,021	-		MPMX19_03587	0.24	+0.4
1,012,021	-		MPMX19_03587	0.24	-1.1
1,012,378	-		MPMX19_03587	0.53	-1.6
1,012,386	+		MPMX19_03587	0.54	-1.9
1,012,387	-		MPMX19_03587	0.54	+1.5
1,012,437	+		MPMX19_03587	0.58	+0.4
1,012,437	+		MPMX19_03587	0.58	-0.5
1,012,437	+		MPMX19_03587	0.58	-1.0
1,012,437	+		MPMX19_03587	0.58	-0.5
1,012,437	+		MPMX19_03587	0.58	-0.5
1,012,437	+		MPMX19_03587	0.58	+0.5
1,012,437	+		MPMX19_03587	0.58	+0.5
1,012,437	+		MPMX19_03587	0.58	-0.6
1,012,437	+		MPMX19_03587	0.58	-0.8
1,012,437	+		MPMX19_03587	0.58	+0.5
1,012,437	+		MPMX19_03587	0.58	-1.9
1,012,438	-		MPMX19_03587	0.58	-0.6
1,012,438	-		MPMX19_03587	0.58	+0.3
1,012,438	-		MPMX19_03587	0.58	-0.5
1,012,438	-		MPMX19_03587	0.58	+1.0
1,012,438	-		MPMX19_03587	0.58	-1.0
1,012,438	-		MPMX19_03587	0.58	+0.6
1,012,481	-		MPMX19_03587	0.61	-0.0
1,012,482	+		MPMX19_03587	0.61	+0.5
1,012,482	+		MPMX19_03587	0.61	-0.9
1,012,482	+		MPMX19_03587	0.61	-0.7
1,012,482	+		MPMX19_03587	0.61	-0.1
1,012,482	+		MPMX19_03587	0.61	-1.8
1,012,482	+		MPMX19_03587	0.61	-0.7
1,012,483	-		MPMX19_03587	0.61	-1.3
1,012,483	-		MPMX19_03587	0.61	-0.5
1,012,483	-		MPMX19_03587	0.61	+0.6
1,012,483	-		MPMX19_03587	0.61	+0.7
1,012,494	+		MPMX19_03587	0.62	+0.1
1,012,494	+		MPMX19_03587	0.62	-0.3
1,012,494	+		MPMX19_03587	0.62	-1.3
1,012,495	-		MPMX19_03587	0.62	-1.5
1,012,495	-		MPMX19_03587	0.62	-0.6
1,012,495	-		MPMX19_03587	0.62	-1.0
1,012,555	-		MPMX19_03587	0.67	+0.6
1,012,567	-		MPMX19_03587	0.68	-0.3
1,012,595	-		MPMX19_03587	0.70	+0.3
1,012,800	+		MPMX19_03587	0.87	-1.0
1,012,801	-		MPMX19_03587	0.87	+0.4
1,012,801	-		MPMX19_03587	0.87	-1.0
1,012,806	+		MPMX19_03587	0.87	-0.2
1,012,806	+		MPMX19_03587	0.87	+0.1
1,012,806	+		MPMX19_03587	0.87	-2.4
1,012,806	+		MPMX19_03587	0.87	-0.3
1,012,806	+		MPMX19_03587	0.87	-0.2
1,012,806	+		MPMX19_03587	0.87	-0.8
1,012,806	+		MPMX19_03587	0.87	-1.0
1,012,806	+		MPMX19_03587	0.87	-0.8
1,012,807	-		MPMX19_03587	0.87	+0.1
1,012,807	-		MPMX19_03587	0.87	-0.3
1,012,807	-		MPMX19_03587	0.87	-0.3
1,012,807	-		MPMX19_03587	0.87	+0.4
1,012,807	-		MPMX19_03587	0.87	-0.3
1,012,807	-		MPMX19_03587	0.87	-0.5
1,012,807	-		MPMX19_03587	0.87	+0.5
1,012,807	-		MPMX19_03587	0.87	+0.5
1,012,833	+		MPMX19_03587	0.89	+0.5
1,012,833	+		MPMX19_03587	0.89	-1.0
1,012,833	+		MPMX19_03587	0.89	+0.1
1,012,833	+		MPMX19_03587	0.89	+1.5
1,012,833	+		MPMX19_03587	0.89	+0.8
1,012,833	+		MPMX19_03587	0.89	+1.4
1,012,833	+		MPMX19_03587	0.89	-0.1
1,012,833	+		MPMX19_03587	0.89	+1.1
1,012,833	+		MPMX19_03587	0.89	+0.2
1,012,833	+		MPMX19_03587	0.89	-1.3
1,012,833	+		MPMX19_03587	0.89	+0.8
1,012,833	+		MPMX19_03587	0.89	+0.8
1,012,833	+		MPMX19_03587	0.89	+0.9
1,012,833	+		MPMX19_03587	0.89	-0.5
1,012,833	+		MPMX19_03587	0.89	-0.3
1,012,833	+		MPMX19_03587	0.89	+0.9
1,012,833	+		MPMX19_03587	0.89	+0.4
1,012,834	-		MPMX19_03587	0.89	-0.6
1,012,834	-		MPMX19_03587	0.89	+0.3
1,012,834	-		MPMX19_03587	0.89	+0.1
1,012,834	-		MPMX19_03587	0.89	+0.8
1,012,834	-		MPMX19_03587	0.89	+0.2
1,012,834	-		MPMX19_03587	0.89	-0.2
1,012,834	-		MPMX19_03587	0.89	+1.2
1,012,834	-		MPMX19_03587	0.89	-0.9
1,012,834	-		MPMX19_03587	0.89	-0.4
1,012,834	-		MPMX19_03587	0.89	-0.4
1,012,834	-		MPMX19_03587	0.89	-0.1
1,012,834	-		MPMX19_03587	0.89	-1.5
1,012,834	-		MPMX19_03587	0.89	-0.3
1,012,834	-		MPMX19_03587	0.89	-1.2
1,012,834	-		MPMX19_03587	0.89	-1.9
1,012,834	-		MPMX19_03587	0.89	+0.2
1,012,834	-		MPMX19_03587	0.89	-0.2
1,012,834	-		MPMX19_03587	0.89	-0.6
1,012,834	-		MPMX19_03587	0.89	+1.1
1,013,103	+		MPMX19_03588	0.20	-1.1
1,013,103	+		MPMX19_03588	0.20	-0.3
1,013,103	+		MPMX19_03588	0.20	+0.5
1,013,103	+		MPMX19_03588	0.20	-1.1
1,013,103	+		MPMX19_03588	0.20	+0.7
1,013,103	+		MPMX19_03588	0.20	+0.6
1,013,103	+		MPMX19_03588	0.20	+0.7
1,013,103	+		MPMX19_03588	0.20	-0.9
1,013,103	+		MPMX19_03588	0.20	-0.3
1,013,104	-		MPMX19_03588	0.20	+0.7
1,013,104	-		MPMX19_03588	0.20	+0.1
1,013,104	-		MPMX19_03588	0.20	-0.3
1,013,104	-		MPMX19_03588	0.20	+0.7
1,013,104	-		MPMX19_03588	0.20	+0.7
1,013,104	-		MPMX19_03588	0.20	-0.1
1,013,104	-		MPMX19_03588	0.20	+0.1
1,013,104	-		MPMX19_03588	0.20	-1.0
1,013,337	+		MPMX19_03588	0.44	+2.5
1,013,337	+		MPMX19_03588	0.44	-0.8
1,013,338	-		MPMX19_03588	0.44	-0.1
1,013,486	+		MPMX19_03588	0.60	+0.3
1,013,487	-		MPMX19_03588	0.60	-0.6
1,013,487	-		MPMX19_03588	0.60	+0.4
1,013,897	-				-2.5
1,013,921	-				-0.1
1,014,020	+				+1.0
1,014,021	-				-2.6
1,014,021	-				-0.1
1,014,104	+		MPMX19_03589	0.14	-1.5
1,014,104	+		MPMX19_03589	0.14	+0.2
1,014,104	+		MPMX19_03589	0.14	+0.3
1,014,104	+		MPMX19_03589	0.14	+0.3
1,014,104	+		MPMX19_03589	0.14	+0.5
1,014,104	+		MPMX19_03589	0.14	-0.1
1,014,104	+		MPMX19_03589	0.14	-0.6
1,014,105	-		MPMX19_03589	0.14	+0.8
1,014,105	-		MPMX19_03589	0.14	+1.2
1,014,105	-		MPMX19_03589	0.14	-0.6
1,014,245	+		MPMX19_03589	0.28	+0.2
1,014,245	+		MPMX19_03589	0.28	+0.7
1,014,245	+		MPMX19_03589	0.28	+0.1
1,014,245	+		MPMX19_03589	0.28	-1.2
1,014,246	-		MPMX19_03589	0.28	+1.1
1,014,246	-		MPMX19_03589	0.28	-0.4
1,014,246	-		MPMX19_03589	0.28	+0.8
1,014,246	-		MPMX19_03589	0.28	-0.6
1,014,293	+		MPMX19_03589	0.33	-0.7
1,014,294	-		MPMX19_03589	0.33	+1.5
1,014,294	-		MPMX19_03589	0.33	-0.5
1,014,294	-		MPMX19_03589	0.33	+0.0
1,014,294	-		MPMX19_03589	0.33	-1.6
1,014,294	-		MPMX19_03589	0.33	-0.6
1,014,294	-		MPMX19_03589	0.33	-1.3
1,014,302	+		MPMX19_03589	0.34	-1.0
1,014,302	+		MPMX19_03589	0.34	-1.6
1,014,302	+		MPMX19_03589	0.34	-1.2
1,014,302	+		MPMX19_03589	0.34	-0.4
1,014,302	+		MPMX19_03589	0.34	+0.4
1,014,302	+		MPMX19_03589	0.34	-0.4
1,014,302	+		MPMX19_03589	0.34	+0.3
1,014,302	+		MPMX19_03589	0.34	-0.7
1,014,302	+		MPMX19_03589	0.34	-0.2
1,014,302	+		MPMX19_03589	0.34	+0.5
1,014,302	+		MPMX19_03589	0.34	-0.2
1,014,302	+		MPMX19_03589	0.34	-1.5
1,014,302	+		MPMX19_03589	0.34	-0.9
1,014,302	+		MPMX19_03589	0.34	-1.1
1,014,303	-		MPMX19_03589	0.34	-0.1
1,014,303	-		MPMX19_03589	0.34	-0.6
1,014,303	-		MPMX19_03589	0.34	+1.1
1,014,303	-		MPMX19_03589	0.34	+1.8
1,014,303	-		MPMX19_03589	0.34	-1.2
1,014,303	-		MPMX19_03589	0.34	-1.8
1,014,303	-		MPMX19_03589	0.34	-0.7
1,014,303	-		MPMX19_03589	0.34	+0.2
1,014,303	-		MPMX19_03589	0.34	-0.4
1,014,303	-		MPMX19_03589	0.34	-0.1
1,014,303	-		MPMX19_03589	0.34	-1.7
1,014,303	-		MPMX19_03589	0.34	+0.2
1,014,303	-		MPMX19_03589	0.34	-0.6
1,014,303	-		MPMX19_03589	0.34	-0.5
1,014,303	-		MPMX19_03589	0.34	-1.3
1,014,307	+		MPMX19_03589	0.34	-1.3
1,014,307	+		MPMX19_03589	0.34	+0.3
1,014,307	+		MPMX19_03589	0.34	-0.8
1,014,307	+		MPMX19_03589	0.34	+0.2
1,014,307	+		MPMX19_03589	0.34	+0.0
1,014,308	-		MPMX19_03589	0.34	-1.6
1,014,308	-		MPMX19_03589	0.34	-0.3
1,014,308	-		MPMX19_03589	0.34	-0.6
1,014,308	-		MPMX19_03589	0.34	+0.9
1,014,308	-		MPMX19_03589	0.34	-1.3
1,014,308	-		MPMX19_03589	0.34	-1.2
1,014,308	-		MPMX19_03589	0.34	-0.1
1,014,308	-		MPMX19_03589	0.34	-0.9
1,014,623	+		MPMX19_03589	0.65	-2.2
1,014,624	-		MPMX19_03589	0.65	+0.7
1,014,624	-		MPMX19_03589	0.65	+0.7
1,014,624	-		MPMX19_03589	0.65	-0.4
1,014,624	-		MPMX19_03589	0.65	-1.9
1,014,651	+		MPMX19_03589	0.68	+0.2
1,014,651	+		MPMX19_03589	0.68	-1.3
1,014,652	-		MPMX19_03589	0.68	-0.5
1,014,652	-		MPMX19_03589	0.68	+1.5
1,014,652	-		MPMX19_03589	0.68	-0.6
1,014,652	-		MPMX19_03589	0.68	-0.5