Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03579

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
999,391	+				-0.7
999,392	-				+0.7
999,408	+				-0.8
999,408	+				-1.8
999,408	+				+0.0
999,408	+				-0.4
999,408	+				+1.0
999,408	+				+0.0
999,409	-				+0.3
999,409	-				+0.5
999,409	-				-0.6
999,409	-				-0.8
999,431	+				-0.7
999,432	-				-0.6
999,432	-				-0.0
999,827	-		MPMX19_03578	0.39	-0.8
999,907	+		MPMX19_03578	0.48	-0.9
999,991	+		MPMX19_03578	0.57	-0.3
999,991	+		MPMX19_03578	0.57	-0.0
999,992	-		MPMX19_03578	0.57	+0.3
999,992	-		MPMX19_03578	0.57	-0.6
999,992	-		MPMX19_03578	0.57	-0.3
1,000,223	+		MPMX19_03578	0.83	+0.1
1,000,223	+		MPMX19_03578	0.83	-0.2
1,000,224	-		MPMX19_03578	0.83	-2.5
1,000,300	+				-0.8
1,000,300	+				-1.9
1,000,301	-				+0.7
1,000,303	+				-0.7
1,000,477	+				-0.0
1,000,477	+				-0.3
1,000,477	+				-1.1
1,000,485	+				-0.5
1,000,800	+		MPMX19_03579	0.25	-0.8
1,000,800	+		MPMX19_03579	0.25	+1.3
1,000,800	+		MPMX19_03579	0.25	+1.0
1,000,801	-		MPMX19_03579	0.25	-0.1
1,000,801	-		MPMX19_03579	0.25	-0.1
1,000,801	-		MPMX19_03579	0.25	+0.4
1,000,831	+		MPMX19_03579	0.27	-1.6
1,000,831	+		MPMX19_03579	0.27	-0.8
1,000,832	-		MPMX19_03579	0.27	+2.1
1,000,832	-		MPMX19_03579	0.27	+0.3
1,000,924	+		MPMX19_03579	0.33	+0.1
1,001,001	+		MPMX19_03579	0.38	-1.5
1,001,001	+		MPMX19_03579	0.38	+0.4
1,001,001	+		MPMX19_03579	0.38	-0.2
1,001,001	+		MPMX19_03579	0.38	+1.0
1,001,001	+		MPMX19_03579	0.38	-1.9
1,001,001	+		MPMX19_03579	0.38	+1.2
1,001,001	+		MPMX19_03579	0.38	-1.0
1,001,001	+		MPMX19_03579	0.38	+0.3
1,001,001	+		MPMX19_03579	0.38	+0.5
1,001,001	+		MPMX19_03579	0.38	-1.5
1,001,001	+		MPMX19_03579	0.38	+0.2
1,001,001	+		MPMX19_03579	0.38	-1.7
1,001,001	+		MPMX19_03579	0.38	-1.3
1,001,001	+		MPMX19_03579	0.38	+0.1
1,001,001	+		MPMX19_03579	0.38	+0.6
1,001,002	-		MPMX19_03579	0.38	-1.0
1,001,002	-		MPMX19_03579	0.38	+0.1
1,001,002	-		MPMX19_03579	0.38	+2.1
1,001,002	-		MPMX19_03579	0.38	-0.3
1,001,002	-		MPMX19_03579	0.38	+1.0
1,001,002	-		MPMX19_03579	0.38	+1.5
1,001,002	-		MPMX19_03579	0.38	-0.6
1,001,002	-		MPMX19_03579	0.38	-0.1
1,001,002	-		MPMX19_03579	0.38	-1.2
1,001,002	-		MPMX19_03579	0.38	+0.6
1,001,002	-		MPMX19_03579	0.38	-0.5
1,001,573	-		MPMX19_03579	0.73	+0.7
1,001,573	-		MPMX19_03579	0.73	+0.3
1,002,075	+				+0.3
1,002,076	-				+0.4
1,002,076	-				+1.3
1,002,076	-				-0.1
1,002,286	+		MPMX19_03580	0.17	+0.5
1,002,286	+		MPMX19_03580	0.17	+0.4
1,002,286	+		MPMX19_03580	0.17	-0.5
1,002,286	+		MPMX19_03580	0.17	-2.2
1,002,286	+		MPMX19_03580	0.17	-1.6
1,002,286	+		MPMX19_03580	0.17	+0.3
1,002,286	+		MPMX19_03580	0.17	-0.1
1,002,286	+		MPMX19_03580	0.17	-1.6
1,002,286	+		MPMX19_03580	0.17	+0.2
1,002,286	+		MPMX19_03580	0.17	+1.0
1,002,287	-		MPMX19_03580	0.17	-0.6
1,002,287	-		MPMX19_03580	0.17	-0.9
1,002,287	-		MPMX19_03580	0.17	-0.0
1,002,287	-		MPMX19_03580	0.17	+0.3
1,002,287	-		MPMX19_03580	0.17	-0.0
1,002,287	-		MPMX19_03580	0.17	-0.6
1,002,287	-		MPMX19_03580	0.17	+0.9
1,002,354	+		MPMX19_03580	0.22	-0.8
1,002,354	+		MPMX19_03580	0.22	-2.6
1,002,354	+		MPMX19_03580	0.22	-0.2
1,002,355	-		MPMX19_03580	0.22	-2.0
1,002,355	-		MPMX19_03580	0.22	-0.2
1,002,355	-		MPMX19_03580	0.22	-0.6
1,002,355	-		MPMX19_03580	0.22	-0.3
1,002,414	+		MPMX19_03580	0.26	+0.2
1,002,414	+		MPMX19_03580	0.26	+2.5
1,002,414	+		MPMX19_03580	0.26	-0.4
1,002,415	-		MPMX19_03580	0.26	-1.3
1,002,415	-		MPMX19_03580	0.26	+1.3
1,002,621	+		MPMX19_03580	0.40	-0.5
1,002,621	+		MPMX19_03580	0.40	-0.7
1,002,622	-		MPMX19_03580	0.40	-0.2
1,002,622	-		MPMX19_03580	0.40	-1.1
1,002,660	+		MPMX19_03580	0.42	+0.3
1,002,660	+		MPMX19_03580	0.42	-0.2
1,002,660	+		MPMX19_03580	0.42	+0.0
1,002,660	+		MPMX19_03580	0.42	+1.5
1,002,660	+		MPMX19_03580	0.42	+0.8
1,002,660	+		MPMX19_03580	0.42	-1.5
1,002,660	+		MPMX19_03580	0.42	+0.5
1,002,660	+		MPMX19_03580	0.42	+0.5
1,002,660	+		MPMX19_03580	0.42	+0.4
1,002,660	+		MPMX19_03580	0.42	+0.2
1,002,660	+		MPMX19_03580	0.42	+0.2
1,002,660	+		MPMX19_03580	0.42	-1.3
1,002,660	+		MPMX19_03580	0.42	-0.5
1,002,660	+		MPMX19_03580	0.42	-0.3
1,002,661	-		MPMX19_03580	0.43	-0.2
1,002,661	-		MPMX19_03580	0.43	+1.9
1,002,661	-		MPMX19_03580	0.43	-0.3
1,002,661	-		MPMX19_03580	0.43	-1.6
1,002,661	-		MPMX19_03580	0.43	-1.9
1,002,661	-		MPMX19_03580	0.43	-1.1
1,002,661	-		MPMX19_03580	0.43	-0.5
1,002,661	-		MPMX19_03580	0.43	-0.1
1,002,661	-		MPMX19_03580	0.43	+1.5
1,002,661	-		MPMX19_03580	0.43	+0.5
1,002,661	-		MPMX19_03580	0.43	-0.2
1,002,661	-		MPMX19_03580	0.43	-0.3
1,002,661	-		MPMX19_03580	0.43	+0.5
1,002,661	-		MPMX19_03580	0.43	-1.9
1,002,876	+		MPMX19_03580	0.57	-0.1
1,002,877	-		MPMX19_03580	0.57	+0.5
1,002,877	-		MPMX19_03580	0.57	-1.1