Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03403 and MPMX19_03404 are separated by 72 nucleotides MPMX19_03404 and MPMX19_03405 are separated by 291 nucleotides
MPMX19_03403: MPMX19_03403 - Glutathione transport system permease protein GsiC, at 790,068 to 791,024
_03403
MPMX19_03404: MPMX19_03404 - Glutathione-binding protein GsiB, at 791,097 to 792,599
_03404
MPMX19_03405: MPMX19_03405 - hypothetical protein, at 792,891 to 794,300
_03405
Position (kb) 791
792
793 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 790.114 kb on + strand at 790.114 kb on + strand at 790.114 kb on + strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.115 kb on - strand at 790.147 kb on + strand at 790.148 kb on - strand at 790.238 kb on - strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.390 kb on + strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.391 kb on - strand, within MPMX19_03403 at 790.525 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.552 kb on + strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.553 kb on - strand, within MPMX19_03403 at 790.615 kb on + strand, within MPMX19_03403 at 790.615 kb on + strand, within MPMX19_03403 at 790.831 kb on + strand, within MPMX19_03403 at 790.993 kb on + strand at 790.993 kb on + strand at 790.993 kb on + strand at 790.993 kb on + strand at 790.994 kb on - strand at 790.994 kb on - strand at 791.014 kb on + strand at 791.015 kb on - strand at 791.015 kb on - strand at 791.015 kb on - strand at 791.067 kb on - strand at 791.109 kb on + strand at 791.109 kb on + strand at 791.110 kb on - strand at 791.110 kb on - strand at 791.110 kb on - strand at 791.194 kb on + strand at 791.194 kb on + strand at 791.195 kb on - strand at 791.195 kb on - strand at 791.195 kb on - strand at 791.245 kb on + strand at 791.245 kb on + strand at 791.245 kb on + strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.246 kb on - strand at 791.317 kb on + strand, within MPMX19_03404 at 791.320 kb on + strand, within MPMX19_03404 at 791.320 kb on + strand, within MPMX19_03404 at 791.320 kb on + strand, within MPMX19_03404 at 791.320 kb on + strand, within MPMX19_03404 at 791.320 kb on + strand, within MPMX19_03404 at 791.321 kb on - strand, within MPMX19_03404 at 791.321 kb on - strand, within MPMX19_03404 at 791.321 kb on - strand, within MPMX19_03404 at 791.321 kb on - strand, within MPMX19_03404 at 791.360 kb on - strand, within MPMX19_03404 at 791.378 kb on + strand, within MPMX19_03404 at 791.378 kb on + strand, within MPMX19_03404 at 791.378 kb on + strand, within MPMX19_03404 at 791.378 kb on + strand, within MPMX19_03404 at 791.379 kb on - strand, within MPMX19_03404 at 791.413 kb on + strand, within MPMX19_03404 at 791.413 kb on + strand, within MPMX19_03404 at 791.413 kb on + strand, within MPMX19_03404 at 791.413 kb on + strand, within MPMX19_03404 at 791.414 kb on - strand, within MPMX19_03404 at 791.414 kb on - strand, within MPMX19_03404 at 791.414 kb on - strand, within MPMX19_03404 at 791.414 kb on - strand, within MPMX19_03404 at 791.414 kb on - strand, within MPMX19_03404 at 791.414 kb on - strand, within MPMX19_03404 at 791.414 kb on - strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.650 kb on + strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.651 kb on - strand, within MPMX19_03404 at 791.653 kb on + strand, within MPMX19_03404 at 791.653 kb on + strand, within MPMX19_03404 at 791.653 kb on + strand, within MPMX19_03404 at 791.654 kb on - strand, within MPMX19_03404 at 791.654 kb on - strand, within MPMX19_03404 at 791.654 kb on - strand, within MPMX19_03404 at 791.654 kb on - strand, within MPMX19_03404 at 791.654 kb on - strand, within MPMX19_03404 at 791.992 kb on + strand, within MPMX19_03404 at 791.992 kb on + strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 791.993 kb on - strand, within MPMX19_03404 at 792.433 kb on + strand, within MPMX19_03404 at 792.434 kb on - strand, within MPMX19_03404 at 792.434 kb on - strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.445 kb on + strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.446 kb on - strand, within MPMX19_03404 at 792.796 kb on - strand at 792.838 kb on + strand at 792.839 kb on - strand at 792.863 kb on + strand at 793.031 kb on + strand at 793.031 kb on + strand at 793.032 kb on - strand, within MPMX19_03405 at 793.091 kb on + strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.092 kb on - strand, within MPMX19_03405 at 793.270 kb on + strand, within MPMX19_03405 at 793.271 kb on - strand, within MPMX19_03405 at 793.271 kb on - strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.339 kb on + strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.340 kb on - strand, within MPMX19_03405 at 793.471 kb on + strand, within MPMX19_03405 at 793.471 kb on + strand, within MPMX19_03405
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 790,114 + +0.2 790,114 + -0.4 790,114 + -0.3 790,115 - -0.5 790,115 - +0.5 790,115 - -0.6 790,115 - +0.9 790,115 - +0.0 790,115 - -0.2 790,115 - -0.1 790,115 - -0.2 790,115 - -1.3 790,147 + -0.2 790,148 - -0.4 790,238 - MPMX19_03403 0.18 -0.9 790,390 + MPMX19_03403 0.34 -1.9 790,390 + MPMX19_03403 0.34 +0.2 790,390 + MPMX19_03403 0.34 +1.3 790,390 + MPMX19_03403 0.34 -1.1 790,390 + MPMX19_03403 0.34 -0.2 790,390 + MPMX19_03403 0.34 -0.1 790,390 + MPMX19_03403 0.34 +0.7 790,390 + MPMX19_03403 0.34 +1.1 790,390 + MPMX19_03403 0.34 +0.3 790,390 + MPMX19_03403 0.34 -0.7 790,391 - MPMX19_03403 0.34 -0.4 790,391 - MPMX19_03403 0.34 -0.9 790,391 - MPMX19_03403 0.34 -0.5 790,391 - MPMX19_03403 0.34 -0.2 790,391 - MPMX19_03403 0.34 +0.3 790,391 - MPMX19_03403 0.34 -0.7 790,391 - MPMX19_03403 0.34 +0.2 790,391 - MPMX19_03403 0.34 -0.3 790,391 - MPMX19_03403 0.34 +1.6 790,525 + MPMX19_03403 0.48 -1.5 790,552 + MPMX19_03403 0.51 -1.2 790,552 + MPMX19_03403 0.51 +2.0 790,552 + MPMX19_03403 0.51 +1.5 790,552 + MPMX19_03403 0.51 +0.3 790,552 + MPMX19_03403 0.51 -0.5 790,552 + MPMX19_03403 0.51 -0.3 790,552 + MPMX19_03403 0.51 +0.7 790,552 + MPMX19_03403 0.51 -0.9 790,552 + MPMX19_03403 0.51 +1.3 790,552 + MPMX19_03403 0.51 +1.1 790,553 - MPMX19_03403 0.51 -0.6 790,553 - MPMX19_03403 0.51 -0.7 790,553 - MPMX19_03403 0.51 -0.1 790,553 - MPMX19_03403 0.51 +0.5 790,553 - MPMX19_03403 0.51 -0.4 790,553 - MPMX19_03403 0.51 -0.1 790,553 - MPMX19_03403 0.51 +0.1 790,553 - MPMX19_03403 0.51 +0.5 790,553 - MPMX19_03403 0.51 -1.7 790,615 + MPMX19_03403 0.57 -0.6 790,615 + MPMX19_03403 0.57 +1.3 790,831 + MPMX19_03403 0.80 -0.1 790,993 + +0.0 790,993 + -0.1 790,993 + +0.0 790,993 + -2.9 790,994 - -1.3 790,994 - -0.3 791,014 + -1.1 791,015 - +0.9 791,015 - +0.6 791,015 - -0.1 791,067 - +0.7 791,109 + -1.7 791,109 + -0.1 791,110 - +0.1 791,110 - +1.1 791,110 - +0.8 791,194 + -0.1 791,194 + -1.5 791,195 - -0.8 791,195 - -0.6 791,195 - -0.9 791,245 + -1.2 791,245 + +0.5 791,245 + +1.2 791,246 - -0.5 791,246 - +0.7 791,246 - -0.1 791,246 - +0.1 791,246 - -0.1 791,246 - -0.8 791,246 - -0.0 791,246 - -0.4 791,246 - +0.3 791,246 - -1.5 791,246 - -1.5 791,317 + MPMX19_03404 0.15 +0.9 791,320 + MPMX19_03404 0.15 -0.7 791,320 + MPMX19_03404 0.15 -1.1 791,320 + MPMX19_03404 0.15 -1.1 791,320 + MPMX19_03404 0.15 -0.3 791,320 + MPMX19_03404 0.15 -0.4 791,321 - MPMX19_03404 0.15 +0.0 791,321 - MPMX19_03404 0.15 -0.8 791,321 - MPMX19_03404 0.15 +2.2 791,321 - MPMX19_03404 0.15 +0.4 791,360 - MPMX19_03404 0.17 -0.4 791,378 + MPMX19_03404 0.19 +0.9 791,378 + MPMX19_03404 0.19 -0.7 791,378 + MPMX19_03404 0.19 -0.2 791,378 + MPMX19_03404 0.19 +0.2 791,379 - MPMX19_03404 0.19 -1.5 791,413 + MPMX19_03404 0.21 -0.1 791,413 + MPMX19_03404 0.21 -0.5 791,413 + MPMX19_03404 0.21 -1.3 791,413 + MPMX19_03404 0.21 -0.1 791,414 - MPMX19_03404 0.21 -0.5 791,414 - MPMX19_03404 0.21 +0.1 791,414 - MPMX19_03404 0.21 -1.3 791,414 - MPMX19_03404 0.21 -0.5 791,414 - MPMX19_03404 0.21 -0.5 791,414 - MPMX19_03404 0.21 -0.4 791,414 - MPMX19_03404 0.21 +0.8 791,650 + MPMX19_03404 0.37 +0.2 791,650 + MPMX19_03404 0.37 -0.7 791,650 + MPMX19_03404 0.37 +0.1 791,650 + MPMX19_03404 0.37 -0.6 791,650 + MPMX19_03404 0.37 -0.4 791,650 + MPMX19_03404 0.37 +1.2 791,650 + MPMX19_03404 0.37 -0.2 791,650 + MPMX19_03404 0.37 +0.5 791,650 + MPMX19_03404 0.37 +0.0 791,650 + MPMX19_03404 0.37 +0.9 791,650 + MPMX19_03404 0.37 -0.8 791,650 + MPMX19_03404 0.37 -0.0 791,650 + MPMX19_03404 0.37 +0.1 791,650 + MPMX19_03404 0.37 +1.0 791,651 - MPMX19_03404 0.37 -0.5 791,651 - MPMX19_03404 0.37 -1.3 791,651 - MPMX19_03404 0.37 +0.2 791,651 - MPMX19_03404 0.37 -1.1 791,651 - MPMX19_03404 0.37 -0.2 791,651 - MPMX19_03404 0.37 -1.1 791,651 - MPMX19_03404 0.37 +0.2 791,651 - MPMX19_03404 0.37 -0.6 791,651 - MPMX19_03404 0.37 +0.7 791,651 - MPMX19_03404 0.37 +0.0 791,651 - MPMX19_03404 0.37 +0.0 791,651 - MPMX19_03404 0.37 +0.1 791,651 - MPMX19_03404 0.37 +0.1 791,651 - MPMX19_03404 0.37 -0.5 791,651 - MPMX19_03404 0.37 -1.9 791,653 + MPMX19_03404 0.37 +0.4 791,653 + MPMX19_03404 0.37 +0.1 791,653 + MPMX19_03404 0.37 -0.9 791,654 - MPMX19_03404 0.37 -0.1 791,654 - MPMX19_03404 0.37 +0.8 791,654 - MPMX19_03404 0.37 -0.6 791,654 - MPMX19_03404 0.37 +0.5 791,654 - MPMX19_03404 0.37 -0.1 791,992 + MPMX19_03404 0.60 -0.8 791,992 + MPMX19_03404 0.60 +0.2 791,993 - MPMX19_03404 0.60 -0.2 791,993 - MPMX19_03404 0.60 -0.9 791,993 - MPMX19_03404 0.60 -0.6 791,993 - MPMX19_03404 0.60 +0.2 791,993 - MPMX19_03404 0.60 +0.4 791,993 - MPMX19_03404 0.60 +0.9 792,433 + MPMX19_03404 0.89 -0.1 792,434 - MPMX19_03404 0.89 -0.3 792,434 - MPMX19_03404 0.89 +0.3 792,445 + MPMX19_03404 0.90 -0.7 792,445 + MPMX19_03404 0.90 -0.7 792,445 + MPMX19_03404 0.90 -1.1 792,445 + MPMX19_03404 0.90 +0.9 792,445 + MPMX19_03404 0.90 +0.6 792,445 + MPMX19_03404 0.90 -0.5 792,445 + MPMX19_03404 0.90 -1.9 792,445 + MPMX19_03404 0.90 -2.2 792,445 + MPMX19_03404 0.90 -1.2 792,445 + MPMX19_03404 0.90 +0.1 792,445 + MPMX19_03404 0.90 -0.4 792,445 + MPMX19_03404 0.90 +1.2 792,445 + MPMX19_03404 0.90 -0.2 792,446 - MPMX19_03404 0.90 +0.8 792,446 - MPMX19_03404 0.90 +0.1 792,446 - MPMX19_03404 0.90 -0.2 792,446 - MPMX19_03404 0.90 -0.3 792,796 - +1.3 792,838 + +1.3 792,839 - +0.3 792,863 + -0.7 793,031 + -0.3 793,031 + -0.7 793,032 - MPMX19_03405 0.10 -1.3 793,091 + MPMX19_03405 0.14 -0.2 793,092 - MPMX19_03405 0.14 +0.3 793,092 - MPMX19_03405 0.14 -0.5 793,092 - MPMX19_03405 0.14 -0.2 793,092 - MPMX19_03405 0.14 -0.1 793,270 + MPMX19_03405 0.27 -0.1 793,271 - MPMX19_03405 0.27 -1.2 793,271 - MPMX19_03405 0.27 -0.2 793,339 + MPMX19_03405 0.32 +0.3 793,339 + MPMX19_03405 0.32 -1.2 793,339 + MPMX19_03405 0.32 -1.0 793,339 + MPMX19_03405 0.32 -0.6 793,339 + MPMX19_03405 0.32 +0.5 793,339 + MPMX19_03405 0.32 +1.1 793,340 - MPMX19_03405 0.32 -0.4 793,340 - MPMX19_03405 0.32 +0.3 793,340 - MPMX19_03405 0.32 +0.5 793,340 - MPMX19_03405 0.32 +0.3 793,340 - MPMX19_03405 0.32 -0.8 793,340 - MPMX19_03405 0.32 -0.5 793,340 - MPMX19_03405 0.32 +0.9 793,340 - MPMX19_03405 0.32 +0.7 793,471 + MPMX19_03405 0.41 -0.7 793,471 + MPMX19_03405 0.41 -0.9
Or see this region's nucleotide sequence