Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03366 and MPMX19_03367 are separated by 34 nucleotides MPMX19_03367 and MPMX19_03368 are separated by 390 nucleotides MPMX19_03368 and MPMX19_03369 overlap by 13 nucleotides MPMX19_03369 and MPMX19_03370 overlap by 4 nucleotides
MPMX19_03366: MPMX19_03366 - hypothetical protein, at 740,873 to 741,043
_03366
MPMX19_03367: MPMX19_03367 - Magnetosome membrane protein 22, at 741,078 to 741,581
_03367
MPMX19_03368: MPMX19_03368 - hypothetical protein, at 741,972 to 745,289
_03368
MPMX19_03369: MPMX19_03369 - hypothetical protein, at 745,277 to 746,047
_03369
MPMX19_03370: MPMX19_03370 - hypothetical protein, at 746,044 to 746,520
_03370
Position (kb) 741
742
743
744
745
746 Strain fitness (log2 ratio) -2
-1
0
1
2 at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.027 kb on + strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.028 kb on - strand at 741.178 kb on + strand, within MPMX19_03367 at 741.179 kb on - strand, within MPMX19_03367 at 741.433 kb on + strand, within MPMX19_03367 at 741.433 kb on + strand, within MPMX19_03367 at 741.433 kb on + strand, within MPMX19_03367 at 741.434 kb on - strand, within MPMX19_03367 at 741.434 kb on - strand, within MPMX19_03367 at 741.434 kb on - strand, within MPMX19_03367 at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.532 kb on + strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.533 kb on - strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.541 kb on + strand at 741.542 kb on - strand at 741.542 kb on - strand at 741.542 kb on - strand at 741.570 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.577 kb on - strand at 741.763 kb on - strand at 741.773 kb on - strand at 741.773 kb on - strand at 741.783 kb on - strand at 741.790 kb on - strand at 741.805 kb on + strand at 741.805 kb on + strand at 741.822 kb on - strand at 741.822 kb on - strand at 741.887 kb on + strand at 741.924 kb on + strand at 741.944 kb on + strand at 741.973 kb on + strand at 741.973 kb on + strand at 741.974 kb on - strand at 742.068 kb on - strand at 742.068 kb on - strand at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.417 kb on + strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.418 kb on - strand, within MPMX19_03368 at 742.500 kb on - strand, within MPMX19_03368 at 742.500 kb on - strand, within MPMX19_03368 at 742.558 kb on + strand, within MPMX19_03368 at 742.558 kb on + strand, within MPMX19_03368 at 742.559 kb on - strand, within MPMX19_03368 at 742.559 kb on - strand, within MPMX19_03368 at 742.780 kb on + strand, within MPMX19_03368 at 742.780 kb on + strand, within MPMX19_03368 at 742.780 kb on + strand, within MPMX19_03368 at 743.533 kb on + strand, within MPMX19_03368 at 743.534 kb on - strand, within MPMX19_03368 at 743.534 kb on - strand, within MPMX19_03368 at 743.534 kb on - strand, within MPMX19_03368 at 743.534 kb on - strand, within MPMX19_03368 at 743.534 kb on - strand, within MPMX19_03368 at 743.594 kb on - strand, within MPMX19_03368 at 743.594 kb on - strand, within MPMX19_03368 at 744.404 kb on + strand, within MPMX19_03368 at 744.404 kb on + strand, within MPMX19_03368 at 744.404 kb on + strand, within MPMX19_03368 at 744.405 kb on - strand, within MPMX19_03368 at 744.436 kb on + strand, within MPMX19_03368 at 744.436 kb on + strand, within MPMX19_03368 at 744.437 kb on - strand, within MPMX19_03368 at 744.437 kb on - strand, within MPMX19_03368 at 744.973 kb on + strand at 744.973 kb on + strand at 744.973 kb on + strand at 744.973 kb on + strand at 744.974 kb on - strand at 744.974 kb on - strand at 744.974 kb on - strand at 744.974 kb on - strand at 744.974 kb on - strand at 744.974 kb on - strand at 744.974 kb on - strand at 744.974 kb on - strand at 744.974 kb on - strand at 745.162 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.171 kb on + strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.172 kb on - strand at 745.204 kb on + strand at 745.205 kb on - strand at 745.205 kb on - strand at 745.281 kb on + strand at 745.282 kb on - strand at 745.282 kb on - strand at 745.282 kb on - strand at 745.474 kb on - strand, within MPMX19_03369 at 745.474 kb on - strand, within MPMX19_03369 at 745.608 kb on + strand, within MPMX19_03369 at 745.609 kb on - strand, within MPMX19_03369 at 746.039 kb on + strand at 746.040 kb on - strand at 746.040 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 741,027 + -0.3 741,027 + +0.3 741,027 + -1.7 741,027 + -0.7 741,027 + -0.2 741,027 + +0.9 741,027 + -0.2 741,027 + +0.2 741,027 + +0.3 741,027 + +0.9 741,027 + -0.3 741,027 + +0.0 741,028 - -0.9 741,028 - -0.6 741,028 - +0.7 741,028 - +0.5 741,028 - -1.3 741,028 - -1.5 741,028 - +0.1 741,028 - +0.5 741,028 - -1.9 741,028 - +1.2 741,028 - +0.5 741,178 + MPMX19_03367 0.20 -1.2 741,179 - MPMX19_03367 0.20 +0.2 741,433 + MPMX19_03367 0.70 +0.1 741,433 + MPMX19_03367 0.70 +0.0 741,433 + MPMX19_03367 0.70 -0.5 741,434 - MPMX19_03367 0.71 -0.9 741,434 - MPMX19_03367 0.71 +0.9 741,434 - MPMX19_03367 0.71 -0.2 741,532 + +0.3 741,532 + -1.1 741,532 + -1.5 741,532 + +0.5 741,532 + -0.7 741,532 + +0.4 741,532 + -1.8 741,532 + -0.5 741,532 + -0.3 741,533 - -0.1 741,533 - -1.7 741,533 - +0.0 741,533 - -0.5 741,533 - -0.9 741,533 - -1.0 741,541 + +0.8 741,541 + -0.5 741,541 + +1.5 741,541 + -0.6 741,541 + +0.6 741,542 - +0.3 741,542 - -0.9 741,542 - -0.8 741,570 - +0.5 741,577 - -0.1 741,577 - +0.3 741,577 - -1.7 741,577 - -0.2 741,577 - +0.7 741,577 - +0.3 741,763 - -2.5 741,773 - -0.3 741,773 - +0.0 741,783 - +0.8 741,790 - -0.2 741,805 + -0.0 741,805 + -0.8 741,822 - +0.0 741,822 - +2.3 741,887 + +0.9 741,924 + +0.4 741,944 + +0.1 741,973 + -1.4 741,973 + -0.8 741,974 - +1.1 742,068 - -0.3 742,068 - -0.5 742,417 + MPMX19_03368 0.13 -1.1 742,417 + MPMX19_03368 0.13 +0.7 742,417 + MPMX19_03368 0.13 +0.2 742,417 + MPMX19_03368 0.13 +0.0 742,417 + MPMX19_03368 0.13 -0.9 742,417 + MPMX19_03368 0.13 +1.1 742,417 + MPMX19_03368 0.13 +0.8 742,418 - MPMX19_03368 0.13 +1.7 742,418 - MPMX19_03368 0.13 +0.5 742,418 - MPMX19_03368 0.13 -0.1 742,418 - MPMX19_03368 0.13 -0.6 742,418 - MPMX19_03368 0.13 -0.2 742,500 - MPMX19_03368 0.16 -0.1 742,500 - MPMX19_03368 0.16 -0.1 742,558 + MPMX19_03368 0.18 -0.2 742,558 + MPMX19_03368 0.18 +0.7 742,559 - MPMX19_03368 0.18 -1.1 742,559 - MPMX19_03368 0.18 +0.5 742,780 + MPMX19_03368 0.24 -0.2 742,780 + MPMX19_03368 0.24 -2.6 742,780 + MPMX19_03368 0.24 -0.1 743,533 + MPMX19_03368 0.47 -0.8 743,534 - MPMX19_03368 0.47 -0.3 743,534 - MPMX19_03368 0.47 -1.1 743,534 - MPMX19_03368 0.47 +1.0 743,534 - MPMX19_03368 0.47 -0.3 743,534 - MPMX19_03368 0.47 -0.3 743,594 - MPMX19_03368 0.49 +0.7 743,594 - MPMX19_03368 0.49 +1.3 744,404 + MPMX19_03368 0.73 +0.5 744,404 + MPMX19_03368 0.73 +0.1 744,404 + MPMX19_03368 0.73 +0.3 744,405 - MPMX19_03368 0.73 -0.3 744,436 + MPMX19_03368 0.74 -1.2 744,436 + MPMX19_03368 0.74 -0.4 744,437 - MPMX19_03368 0.74 +0.2 744,437 - MPMX19_03368 0.74 +0.2 744,973 + -0.5 744,973 + +0.0 744,973 + -0.3 744,973 + +0.1 744,974 - -0.3 744,974 - -1.4 744,974 - +1.5 744,974 - -1.3 744,974 - -1.4 744,974 - -0.1 744,974 - -0.7 744,974 - -0.4 744,974 - +0.7 745,162 + -0.8 745,171 + -1.1 745,171 + +0.2 745,171 + +0.8 745,171 + -1.9 745,171 + +1.4 745,171 + -0.1 745,171 + +0.9 745,171 + -0.3 745,171 + -0.5 745,171 + +0.3 745,171 + +0.1 745,171 + +0.1 745,171 + -0.9 745,171 + -0.8 745,171 + +2.5 745,171 + -0.3 745,171 + -2.2 745,171 + -0.5 745,171 + -1.9 745,172 - -1.2 745,172 - +0.8 745,172 - -0.7 745,172 - +0.6 745,172 - -1.7 745,172 - -2.4 745,172 - -0.3 745,172 - -1.9 745,172 - -0.1 745,172 - +0.2 745,172 - -0.4 745,172 - -0.6 745,172 - +0.7 745,172 - -0.5 745,172 - -2.3 745,172 - -0.1 745,172 - -0.7 745,172 - -0.5 745,204 + +0.6 745,205 - -0.8 745,205 - -0.1 745,281 + +0.1 745,282 - -0.5 745,282 - -0.7 745,282 - -0.1 745,474 - MPMX19_03369 0.26 +0.1 745,474 - MPMX19_03369 0.26 +0.1 745,608 + MPMX19_03369 0.43 +0.3 745,609 - MPMX19_03369 0.43 -1.7 746,039 + +0.1 746,040 - +0.5 746,040 - +0.5
Or see this region's nucleotide sequence