Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03218 and MPMX19_03219 are separated by 186 nucleotides MPMX19_03219 and MPMX19_03220 are separated by 121 nucleotides MPMX19_03220 and MPMX19_03221 are separated by 8 nucleotides
MPMX19_03218: MPMX19_03218 - Haloalkane dehalogenase, at 517,694 to 518,767
_03218
MPMX19_03219: MPMX19_03219 - putative ABC transporter ATP-binding protein YheS, at 518,954 to 520,552
_03219
MPMX19_03220: MPMX19_03220 - hypothetical protein, at 520,674 to 521,312
_03220
MPMX19_03221: MPMX19_03221 - Adaptive-response sensory-kinase SasA, at 521,321 to 522,673
_03221
Position (kb) 518
519
520
521 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 517.959 kb on + strand, within MPMX19_03218 at 517.959 kb on + strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 518.086 kb on + strand, within MPMX19_03218 at 518.087 kb on - strand, within MPMX19_03218 at 518.087 kb on - strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.089 kb on - strand, within MPMX19_03218 at 518.127 kb on + strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.131 kb on - strand, within MPMX19_03218 at 518.131 kb on - strand, within MPMX19_03218 at 518.136 kb on + strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.203 kb on - strand, within MPMX19_03218 at 518.284 kb on - strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.485 kb on - strand, within MPMX19_03218 at 518.485 kb on - strand, within MPMX19_03218 at 518.542 kb on - strand, within MPMX19_03218 at 518.542 kb on - strand, within MPMX19_03218 at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.789 kb on + strand at 518.789 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.863 kb on - strand at 518.863 kb on - strand at 518.863 kb on - strand at 518.891 kb on + strand at 518.891 kb on + strand at 518.891 kb on + strand at 518.892 kb on - strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.956 kb on - strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 520.842 kb on + strand, within MPMX19_03220 at 520.984 kb on - strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.369 kb on + strand at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 517,959 + MPMX19_03218 0.25 +0.3 517,959 + MPMX19_03218 0.25 +0.2 517,960 - MPMX19_03218 0.25 -0.5 517,960 - MPMX19_03218 0.25 -1.2 517,960 - MPMX19_03218 0.25 -1.2 518,086 + MPMX19_03218 0.36 -0.6 518,087 - MPMX19_03218 0.37 +0.4 518,087 - MPMX19_03218 0.37 +0.1 518,088 + MPMX19_03218 0.37 -0.2 518,088 + MPMX19_03218 0.37 -2.6 518,088 + MPMX19_03218 0.37 -0.1 518,089 - MPMX19_03218 0.37 -0.9 518,127 + MPMX19_03218 0.40 +1.2 518,128 - MPMX19_03218 0.40 +0.7 518,128 - MPMX19_03218 0.40 -0.0 518,128 - MPMX19_03218 0.40 -1.0 518,131 - MPMX19_03218 0.41 -0.3 518,131 - MPMX19_03218 0.41 +0.7 518,136 + MPMX19_03218 0.41 +0.1 518,137 - MPMX19_03218 0.41 -0.9 518,137 - MPMX19_03218 0.41 -1.4 518,137 - MPMX19_03218 0.41 -1.7 518,203 - MPMX19_03218 0.47 -1.0 518,284 - MPMX19_03218 0.55 +0.7 518,469 + MPMX19_03218 0.72 -0.6 518,469 + MPMX19_03218 0.72 -0.1 518,469 + MPMX19_03218 0.72 -1.3 518,469 + MPMX19_03218 0.72 +0.4 518,469 + MPMX19_03218 0.72 -1.3 518,469 + MPMX19_03218 0.72 -0.3 518,469 + MPMX19_03218 0.72 -0.0 518,469 + MPMX19_03218 0.72 -1.3 518,469 + MPMX19_03218 0.72 -0.3 518,469 + MPMX19_03218 0.72 -0.0 518,469 + MPMX19_03218 0.72 -0.6 518,469 + MPMX19_03218 0.72 -0.1 518,469 + MPMX19_03218 0.72 -0.0 518,469 + MPMX19_03218 0.72 +0.2 518,469 + MPMX19_03218 0.72 +0.8 518,469 + MPMX19_03218 0.72 +0.1 518,469 + MPMX19_03218 0.72 -0.8 518,469 + MPMX19_03218 0.72 -0.3 518,469 + MPMX19_03218 0.72 +0.0 518,469 + MPMX19_03218 0.72 -0.5 518,469 + MPMX19_03218 0.72 +0.4 518,469 + MPMX19_03218 0.72 +1.0 518,469 + MPMX19_03218 0.72 -1.5 518,469 + MPMX19_03218 0.72 -0.0 518,469 + MPMX19_03218 0.72 -1.0 518,469 + MPMX19_03218 0.72 +0.2 518,469 + MPMX19_03218 0.72 -0.5 518,469 + MPMX19_03218 0.72 -0.3 518,470 - MPMX19_03218 0.72 +0.5 518,470 - MPMX19_03218 0.72 -0.6 518,470 - MPMX19_03218 0.72 -1.2 518,470 - MPMX19_03218 0.72 +0.5 518,470 - MPMX19_03218 0.72 -2.4 518,470 - MPMX19_03218 0.72 -1.9 518,470 - MPMX19_03218 0.72 +0.4 518,470 - MPMX19_03218 0.72 +1.1 518,470 - MPMX19_03218 0.72 -0.2 518,470 - MPMX19_03218 0.72 +0.7 518,470 - MPMX19_03218 0.72 -0.5 518,470 - MPMX19_03218 0.72 +0.1 518,470 - MPMX19_03218 0.72 +0.4 518,470 - MPMX19_03218 0.72 -0.5 518,470 - MPMX19_03218 0.72 -0.9 518,470 - MPMX19_03218 0.72 -0.5 518,470 - MPMX19_03218 0.72 -3.0 518,470 - MPMX19_03218 0.72 -0.4 518,470 - MPMX19_03218 0.72 -1.6 518,470 - MPMX19_03218 0.72 +2.0 518,470 - MPMX19_03218 0.72 -0.2 518,470 - MPMX19_03218 0.72 +0.5 518,470 - MPMX19_03218 0.72 -0.9 518,470 - MPMX19_03218 0.72 -0.5 518,470 - MPMX19_03218 0.72 +2.2 518,470 - MPMX19_03218 0.72 -0.8 518,470 - MPMX19_03218 0.72 -0.3 518,470 - MPMX19_03218 0.72 +0.5 518,484 + MPMX19_03218 0.74 -2.4 518,484 + MPMX19_03218 0.74 +0.4 518,484 + MPMX19_03218 0.74 +0.1 518,485 - MPMX19_03218 0.74 -0.6 518,485 - MPMX19_03218 0.74 +2.4 518,542 - MPMX19_03218 0.79 -1.0 518,542 - MPMX19_03218 0.79 +0.7 518,769 + -1.3 518,769 + +1.5 518,769 + +1.2 518,769 + -0.5 518,769 + -0.2 518,769 + +0.5 518,769 + -1.0 518,769 + -2.0 518,770 - -1.2 518,770 - -0.0 518,770 - -1.0 518,770 - +0.5 518,770 - -1.5 518,770 - -1.6 518,770 - -1.5 518,770 - -1.2 518,789 + -0.0 518,789 + +0.7 518,819 + +0.4 518,819 + +0.2 518,819 + -0.5 518,819 + -0.8 518,819 + -0.2 518,820 - -0.2 518,820 - +0.5 518,820 - -0.9 518,820 - -0.5 518,862 + -0.5 518,862 + -0.2 518,862 + -0.2 518,862 + -1.7 518,862 + +0.5 518,863 - -1.3 518,863 - +0.2 518,863 - +0.1 518,891 + -0.0 518,891 + +0.4 518,891 + -0.2 518,892 - -1.1 518,955 + -2.3 518,955 + -1.3 518,955 + +0.2 518,955 + +0.0 518,956 - -1.4 519,057 + -0.7 519,057 + +0.9 519,057 + -0.8 519,057 + +1.3 519,057 + +0.9 519,058 - -0.6 519,058 - -0.0 519,058 - +0.4 519,058 - -1.8 519,416 + MPMX19_03219 0.29 -1.5 519,416 + MPMX19_03219 0.29 -1.0 519,416 + MPMX19_03219 0.29 -0.5 519,416 + MPMX19_03219 0.29 -1.5 519,416 + MPMX19_03219 0.29 -1.0 519,416 + MPMX19_03219 0.29 -0.5 519,417 - MPMX19_03219 0.29 -0.6 519,417 - MPMX19_03219 0.29 +0.1 519,417 - MPMX19_03219 0.29 +0.7 519,417 - MPMX19_03219 0.29 -0.6 520,842 + MPMX19_03220 0.26 -0.5 520,984 - MPMX19_03220 0.49 -0.6 521,010 + MPMX19_03220 0.53 -1.0 521,010 + MPMX19_03220 0.53 -0.6 521,010 + MPMX19_03220 0.53 -0.4 521,010 + MPMX19_03220 0.53 +0.0 521,010 + MPMX19_03220 0.53 -0.0 521,010 + MPMX19_03220 0.53 +0.3 521,022 + MPMX19_03220 0.54 -0.2 521,022 + MPMX19_03220 0.54 +0.3 521,022 + MPMX19_03220 0.54 -0.8 521,022 + MPMX19_03220 0.54 -0.0 521,022 + MPMX19_03220 0.54 -0.7 521,022 + MPMX19_03220 0.54 -0.5 521,022 + MPMX19_03220 0.54 +1.1 521,023 - MPMX19_03220 0.55 +0.2 521,023 - MPMX19_03220 0.55 -1.1 521,023 - MPMX19_03220 0.55 +0.1 521,023 - MPMX19_03220 0.55 -0.2 521,023 - MPMX19_03220 0.55 +0.9 521,023 - MPMX19_03220 0.55 -2.0 521,023 - MPMX19_03220 0.55 +0.8 521,023 - MPMX19_03220 0.55 -0.1 521,023 - MPMX19_03220 0.55 +1.2 521,023 - MPMX19_03220 0.55 -0.4 521,023 - MPMX19_03220 0.55 -0.1 521,369 + +0.4 521,470 - MPMX19_03221 0.11 +0.1 521,470 - MPMX19_03221 0.11 +0.4 521,470 - MPMX19_03221 0.11 -0.0 521,470 - MPMX19_03221 0.11 -1.5
Or see this region's nucleotide sequence