Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02837 and MPMX19_02838 overlap by 4 nucleotides MPMX19_02838 and MPMX19_02839 are separated by 10 nucleotides MPMX19_02839 and MPMX19_02840 are separated by 59 nucleotides MPMX19_02840 and MPMX19_02841 are separated by 11 nucleotides
MPMX19_02837: MPMX19_02837 - Malonyl-S-ACP:biotin-protein carboxyltransferase MADC, at 78,220 to 79,107
_02837
MPMX19_02838: MPMX19_02838 - Malonate decarboxylase acyl carrier protein, at 79,104 to 79,424
_02838
MPMX19_02839: MPMX19_02839 - Acetyl-S-ACP:malonate ACP transferase, at 79,435 to 81,090
_02839
MPMX19_02840: MPMX19_02840 - hypothetical protein, at 81,150 to 81,914
_02840
MPMX19_02841: MPMX19_02841 - hypothetical protein, at 81,926 to 82,333
_02841
Position (kb) 79
80
81
82 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 78.497 kb on + strand, within MPMX19_02837 at 78.498 kb on - strand, within MPMX19_02837 at 78.498 kb on - strand, within MPMX19_02837 at 78.498 kb on - strand, within MPMX19_02837 at 79.094 kb on + strand at 79.095 kb on - strand at 79.095 kb on - strand at 79.097 kb on + strand at 79.097 kb on + strand at 79.097 kb on + strand at 79.097 kb on + strand at 79.097 kb on + strand at 79.097 kb on + strand at 79.097 kb on + strand at 79.097 kb on + strand at 79.098 kb on - strand at 79.098 kb on - strand at 79.402 kb on + strand at 79.430 kb on - strand at 79.466 kb on + strand at 79.466 kb on + strand at 79.466 kb on + strand at 79.467 kb on - strand at 79.467 kb on - strand at 79.632 kb on - strand, within MPMX19_02839 at 79.736 kb on + strand, within MPMX19_02839 at 79.736 kb on + strand, within MPMX19_02839 at 79.736 kb on + strand, within MPMX19_02839 at 79.736 kb on + strand, within MPMX19_02839 at 79.736 kb on + strand, within MPMX19_02839 at 79.736 kb on + strand, within MPMX19_02839 at 79.737 kb on - strand, within MPMX19_02839 at 79.737 kb on - strand, within MPMX19_02839 at 79.737 kb on - strand, within MPMX19_02839 at 79.737 kb on - strand, within MPMX19_02839 at 79.737 kb on - strand, within MPMX19_02839 at 79.737 kb on - strand, within MPMX19_02839 at 79.753 kb on + strand, within MPMX19_02839 at 79.753 kb on + strand, within MPMX19_02839 at 79.754 kb on - strand, within MPMX19_02839 at 79.818 kb on + strand, within MPMX19_02839 at 79.818 kb on + strand, within MPMX19_02839 at 79.818 kb on + strand, within MPMX19_02839 at 79.818 kb on + strand, within MPMX19_02839 at 79.818 kb on + strand, within MPMX19_02839 at 79.818 kb on + strand, within MPMX19_02839 at 79.818 kb on + strand, within MPMX19_02839 at 79.819 kb on - strand, within MPMX19_02839 at 79.819 kb on - strand, within MPMX19_02839 at 79.819 kb on - strand, within MPMX19_02839 at 79.819 kb on - strand, within MPMX19_02839 at 79.819 kb on - strand, within MPMX19_02839 at 80.043 kb on + strand, within MPMX19_02839 at 80.060 kb on + strand, within MPMX19_02839 at 80.060 kb on + strand, within MPMX19_02839 at 80.060 kb on + strand, within MPMX19_02839 at 80.060 kb on + strand, within MPMX19_02839 at 80.061 kb on - strand, within MPMX19_02839 at 80.061 kb on - strand, within MPMX19_02839 at 80.061 kb on - strand, within MPMX19_02839 at 80.061 kb on - strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.145 kb on + strand, within MPMX19_02839 at 80.146 kb on - strand, within MPMX19_02839 at 80.146 kb on - strand, within MPMX19_02839 at 80.146 kb on - strand, within MPMX19_02839 at 80.146 kb on - strand, within MPMX19_02839 at 80.146 kb on - strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.147 kb on + strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.148 kb on - strand, within MPMX19_02839 at 80.285 kb on + strand, within MPMX19_02839 at 80.285 kb on + strand, within MPMX19_02839 at 80.286 kb on - strand, within MPMX19_02839 at 80.286 kb on - strand, within MPMX19_02839 at 80.354 kb on + strand, within MPMX19_02839 at 80.354 kb on + strand, within MPMX19_02839 at 80.354 kb on + strand, within MPMX19_02839 at 80.363 kb on + strand, within MPMX19_02839 at 80.363 kb on + strand, within MPMX19_02839 at 80.363 kb on + strand, within MPMX19_02839 at 80.363 kb on + strand, within MPMX19_02839 at 80.364 kb on - strand, within MPMX19_02839 at 80.364 kb on - strand, within MPMX19_02839 at 80.364 kb on - strand, within MPMX19_02839 at 80.364 kb on - strand, within MPMX19_02839 at 80.364 kb on - strand, within MPMX19_02839 at 80.364 kb on - strand, within MPMX19_02839 at 80.364 kb on - strand, within MPMX19_02839 at 80.445 kb on + strand, within MPMX19_02839 at 80.445 kb on + strand, within MPMX19_02839 at 80.445 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.447 kb on + strand, within MPMX19_02839 at 80.448 kb on - strand, within MPMX19_02839 at 80.448 kb on - strand, within MPMX19_02839 at 80.448 kb on - strand, within MPMX19_02839 at 80.448 kb on - strand, within MPMX19_02839 at 80.448 kb on - strand, within MPMX19_02839 at 80.448 kb on - strand, within MPMX19_02839 at 80.448 kb on - strand, within MPMX19_02839 at 80.609 kb on + strand, within MPMX19_02839 at 80.609 kb on + strand, within MPMX19_02839 at 80.609 kb on + strand, within MPMX19_02839 at 80.609 kb on + strand, within MPMX19_02839 at 80.609 kb on + strand, within MPMX19_02839 at 80.609 kb on + strand, within MPMX19_02839 at 80.610 kb on - strand, within MPMX19_02839 at 80.610 kb on - strand, within MPMX19_02839 at 80.610 kb on - strand, within MPMX19_02839 at 80.610 kb on - strand, within MPMX19_02839 at 80.610 kb on - strand, within MPMX19_02839 at 80.610 kb on - strand, within MPMX19_02839 at 80.678 kb on + strand, within MPMX19_02839 at 80.679 kb on - strand, within MPMX19_02839 at 80.679 kb on - strand, within MPMX19_02839 at 80.679 kb on - strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.699 kb on + strand, within MPMX19_02839 at 80.700 kb on - strand, within MPMX19_02839 at 80.700 kb on - strand, within MPMX19_02839 at 80.700 kb on - strand, within MPMX19_02839 at 80.700 kb on - strand, within MPMX19_02839 at 80.700 kb on - strand, within MPMX19_02839 at 80.700 kb on - strand, within MPMX19_02839 at 81.025 kb on + strand at 81.025 kb on + strand at 81.025 kb on + strand at 81.025 kb on + strand at 81.025 kb on + strand at 81.025 kb on + strand at 81.025 kb on + strand at 81.025 kb on + strand at 81.025 kb on + strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.026 kb on - strand at 81.241 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.472 kb on + strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.473 kb on - strand, within MPMX19_02840 at 81.521 kb on - strand, within MPMX19_02840 at 81.521 kb on - strand, within MPMX19_02840 at 81.521 kb on - strand, within MPMX19_02840 at 81.521 kb on - strand, within MPMX19_02840 at 81.751 kb on + strand, within MPMX19_02840 at 81.751 kb on + strand, within MPMX19_02840 at 81.752 kb on - strand, within MPMX19_02840 at 81.752 kb on - strand, within MPMX19_02840 at 81.752 kb on - strand, within MPMX19_02840 at 81.927 kb on + strand at 81.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 78,497 + MPMX19_02837 0.31 +1.1 78,498 - MPMX19_02837 0.31 -0.6 78,498 - MPMX19_02837 0.31 -0.2 78,498 - MPMX19_02837 0.31 +0.3 79,094 + -0.1 79,095 - +0.1 79,095 - -1.2 79,097 + +0.1 79,097 + +0.3 79,097 + +0.3 79,097 + +0.0 79,097 + +0.4 79,097 + +0.0 79,097 + -0.4 79,097 + -1.1 79,098 - +0.7 79,098 - -1.1 79,402 + +0.0 79,430 - +0.4 79,466 + +1.6 79,466 + -1.4 79,466 + -1.6 79,467 - -0.2 79,467 - -1.2 79,632 - MPMX19_02839 0.12 +0.4 79,736 + MPMX19_02839 0.18 -0.4 79,736 + MPMX19_02839 0.18 +0.6 79,736 + MPMX19_02839 0.18 -0.7 79,736 + MPMX19_02839 0.18 +0.1 79,736 + MPMX19_02839 0.18 -0.7 79,736 + MPMX19_02839 0.18 +0.7 79,737 - MPMX19_02839 0.18 -0.7 79,737 - MPMX19_02839 0.18 -0.2 79,737 - MPMX19_02839 0.18 +0.4 79,737 - MPMX19_02839 0.18 -1.2 79,737 - MPMX19_02839 0.18 +0.5 79,737 - MPMX19_02839 0.18 -1.3 79,753 + MPMX19_02839 0.19 +0.6 79,753 + MPMX19_02839 0.19 -1.0 79,754 - MPMX19_02839 0.19 -0.3 79,818 + MPMX19_02839 0.23 +0.3 79,818 + MPMX19_02839 0.23 +1.6 79,818 + MPMX19_02839 0.23 -1.2 79,818 + MPMX19_02839 0.23 -1.0 79,818 + MPMX19_02839 0.23 -0.1 79,818 + MPMX19_02839 0.23 -0.2 79,818 + MPMX19_02839 0.23 +0.6 79,819 - MPMX19_02839 0.23 -0.6 79,819 - MPMX19_02839 0.23 +0.5 79,819 - MPMX19_02839 0.23 -0.9 79,819 - MPMX19_02839 0.23 +1.2 79,819 - MPMX19_02839 0.23 -1.6 80,043 + MPMX19_02839 0.37 +0.5 80,060 + MPMX19_02839 0.38 -1.3 80,060 + MPMX19_02839 0.38 +0.4 80,060 + MPMX19_02839 0.38 +0.6 80,060 + MPMX19_02839 0.38 +0.4 80,061 - MPMX19_02839 0.38 +1.6 80,061 - MPMX19_02839 0.38 -0.7 80,061 - MPMX19_02839 0.38 +0.0 80,061 - MPMX19_02839 0.38 -1.0 80,145 + MPMX19_02839 0.43 -1.1 80,145 + MPMX19_02839 0.43 +0.3 80,145 + MPMX19_02839 0.43 +0.2 80,145 + MPMX19_02839 0.43 +1.0 80,145 + MPMX19_02839 0.43 +0.1 80,145 + MPMX19_02839 0.43 +1.9 80,145 + MPMX19_02839 0.43 +1.1 80,145 + MPMX19_02839 0.43 +1.3 80,146 - MPMX19_02839 0.43 +0.2 80,146 - MPMX19_02839 0.43 -0.2 80,146 - MPMX19_02839 0.43 +0.0 80,146 - MPMX19_02839 0.43 -1.0 80,146 - MPMX19_02839 0.43 +0.6 80,147 + MPMX19_02839 0.43 +0.6 80,147 + MPMX19_02839 0.43 -1.9 80,147 + MPMX19_02839 0.43 -0.3 80,147 + MPMX19_02839 0.43 +1.6 80,147 + MPMX19_02839 0.43 -0.2 80,147 + MPMX19_02839 0.43 -0.4 80,147 + MPMX19_02839 0.43 +1.0 80,147 + MPMX19_02839 0.43 +0.4 80,147 + MPMX19_02839 0.43 +0.4 80,147 + MPMX19_02839 0.43 -1.4 80,148 - MPMX19_02839 0.43 -0.2 80,148 - MPMX19_02839 0.43 +0.6 80,148 - MPMX19_02839 0.43 +0.1 80,148 - MPMX19_02839 0.43 -0.4 80,148 - MPMX19_02839 0.43 -0.2 80,148 - MPMX19_02839 0.43 -0.7 80,148 - MPMX19_02839 0.43 -2.5 80,148 - MPMX19_02839 0.43 +0.8 80,148 - MPMX19_02839 0.43 +1.0 80,148 - MPMX19_02839 0.43 -1.9 80,148 - MPMX19_02839 0.43 -0.4 80,148 - MPMX19_02839 0.43 +0.6 80,148 - MPMX19_02839 0.43 +0.2 80,285 + MPMX19_02839 0.51 -1.4 80,285 + MPMX19_02839 0.51 -0.1 80,286 - MPMX19_02839 0.51 +0.8 80,286 - MPMX19_02839 0.51 -0.2 80,354 + MPMX19_02839 0.55 -0.3 80,354 + MPMX19_02839 0.55 +0.6 80,354 + MPMX19_02839 0.55 -0.6 80,363 + MPMX19_02839 0.56 -0.5 80,363 + MPMX19_02839 0.56 -0.3 80,363 + MPMX19_02839 0.56 +1.1 80,363 + MPMX19_02839 0.56 +1.6 80,364 - MPMX19_02839 0.56 -0.7 80,364 - MPMX19_02839 0.56 +1.0 80,364 - MPMX19_02839 0.56 +0.1 80,364 - MPMX19_02839 0.56 +1.3 80,364 - MPMX19_02839 0.56 -0.3 80,364 - MPMX19_02839 0.56 -0.9 80,364 - MPMX19_02839 0.56 -1.7 80,445 + MPMX19_02839 0.61 +0.7 80,445 + MPMX19_02839 0.61 +0.8 80,445 + MPMX19_02839 0.61 +1.1 80,447 + MPMX19_02839 0.61 +1.2 80,447 + MPMX19_02839 0.61 +1.0 80,447 + MPMX19_02839 0.61 -0.4 80,447 + MPMX19_02839 0.61 +0.3 80,447 + MPMX19_02839 0.61 +0.6 80,447 + MPMX19_02839 0.61 +0.6 80,447 + MPMX19_02839 0.61 +0.3 80,447 + MPMX19_02839 0.61 +0.2 80,447 + MPMX19_02839 0.61 +1.3 80,448 - MPMX19_02839 0.61 -0.7 80,448 - MPMX19_02839 0.61 +0.0 80,448 - MPMX19_02839 0.61 -0.9 80,448 - MPMX19_02839 0.61 -0.4 80,448 - MPMX19_02839 0.61 -0.4 80,448 - MPMX19_02839 0.61 -1.0 80,448 - MPMX19_02839 0.61 +1.6 80,609 + MPMX19_02839 0.71 -0.2 80,609 + MPMX19_02839 0.71 +0.4 80,609 + MPMX19_02839 0.71 -0.7 80,609 + MPMX19_02839 0.71 +1.6 80,609 + MPMX19_02839 0.71 +1.4 80,609 + MPMX19_02839 0.71 -0.0 80,610 - MPMX19_02839 0.71 +0.4 80,610 - MPMX19_02839 0.71 -0.3 80,610 - MPMX19_02839 0.71 -0.7 80,610 - MPMX19_02839 0.71 +1.0 80,610 - MPMX19_02839 0.71 -0.1 80,610 - MPMX19_02839 0.71 -0.7 80,678 + MPMX19_02839 0.75 -1.1 80,679 - MPMX19_02839 0.75 +1.1 80,679 - MPMX19_02839 0.75 -0.3 80,679 - MPMX19_02839 0.75 -0.9 80,699 + MPMX19_02839 0.76 -0.8 80,699 + MPMX19_02839 0.76 +0.4 80,699 + MPMX19_02839 0.76 +0.6 80,699 + MPMX19_02839 0.76 -0.4 80,699 + MPMX19_02839 0.76 +0.1 80,699 + MPMX19_02839 0.76 +0.0 80,699 + MPMX19_02839 0.76 -0.6 80,699 + MPMX19_02839 0.76 +0.6 80,699 + MPMX19_02839 0.76 +0.0 80,699 + MPMX19_02839 0.76 -0.6 80,700 - MPMX19_02839 0.76 -0.2 80,700 - MPMX19_02839 0.76 -0.5 80,700 - MPMX19_02839 0.76 +0.4 80,700 - MPMX19_02839 0.76 -1.3 80,700 - MPMX19_02839 0.76 +0.9 80,700 - MPMX19_02839 0.76 +0.1 81,025 + +1.9 81,025 + -0.2 81,025 + +0.6 81,025 + +0.0 81,025 + -0.7 81,025 + -1.0 81,025 + +1.4 81,025 + -0.2 81,025 + -0.5 81,026 - -0.4 81,026 - -0.6 81,026 - -0.8 81,026 - +1.0 81,026 - -0.0 81,026 - -0.5 81,026 - +1.0 81,026 - -0.6 81,026 - -0.2 81,026 - +0.7 81,026 - -1.0 81,026 - -0.4 81,026 - +0.3 81,026 - +0.5 81,026 - -0.9 81,026 - +0.7 81,241 + MPMX19_02840 0.12 -0.7 81,472 + MPMX19_02840 0.42 -1.8 81,472 + MPMX19_02840 0.42 +0.9 81,472 + MPMX19_02840 0.42 -2.0 81,472 + MPMX19_02840 0.42 +0.3 81,472 + MPMX19_02840 0.42 -0.1 81,472 + MPMX19_02840 0.42 -1.6 81,472 + MPMX19_02840 0.42 +0.9 81,472 + MPMX19_02840 0.42 -0.8 81,472 + MPMX19_02840 0.42 -2.9 81,472 + MPMX19_02840 0.42 -1.1 81,472 + MPMX19_02840 0.42 -0.6 81,472 + MPMX19_02840 0.42 +0.2 81,472 + MPMX19_02840 0.42 -0.8 81,472 + MPMX19_02840 0.42 -0.3 81,472 + MPMX19_02840 0.42 -0.9 81,472 + MPMX19_02840 0.42 -0.3 81,473 - MPMX19_02840 0.42 -0.7 81,473 - MPMX19_02840 0.42 -0.6 81,473 - MPMX19_02840 0.42 -0.6 81,473 - MPMX19_02840 0.42 +0.2 81,473 - MPMX19_02840 0.42 -0.4 81,473 - MPMX19_02840 0.42 -1.2 81,473 - MPMX19_02840 0.42 -0.7 81,473 - MPMX19_02840 0.42 -0.1 81,473 - MPMX19_02840 0.42 -0.6 81,473 - MPMX19_02840 0.42 -1.4 81,473 - MPMX19_02840 0.42 -0.1 81,521 - MPMX19_02840 0.48 +0.5 81,521 - MPMX19_02840 0.48 +0.0 81,521 - MPMX19_02840 0.48 +0.0 81,521 - MPMX19_02840 0.48 +0.4 81,751 + MPMX19_02840 0.79 -0.6 81,751 + MPMX19_02840 0.79 +1.6 81,752 - MPMX19_02840 0.79 -0.9 81,752 - MPMX19_02840 0.79 +0.3 81,752 - MPMX19_02840 0.79 +0.9 81,927 + +0.2 81,928 - +0.3
Or see this region's nucleotide sequence