Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02783

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
15,472	+				+0.5
15,472	+				-1.6
15,494	+				+1.1
15,495	-				+0.3
15,724	+		MPMX19_02782	0.18	-0.2
15,724	+		MPMX19_02782	0.18	+0.6
15,724	+		MPMX19_02782	0.18	-0.2
15,724	+		MPMX19_02782	0.18	-0.4
15,724	+		MPMX19_02782	0.18	-0.1
15,725	-		MPMX19_02782	0.18	-0.7
15,725	-		MPMX19_02782	0.18	+0.6
15,725	-		MPMX19_02782	0.18	-0.4
15,725	-		MPMX19_02782	0.18	-0.7
15,725	-		MPMX19_02782	0.18	+0.5
15,725	-		MPMX19_02782	0.18	-0.1
15,889	+		MPMX19_02782	0.40	-3.6
15,890	-		MPMX19_02782	0.40	+0.5
15,890	-		MPMX19_02782	0.40	+0.5
15,890	-		MPMX19_02782	0.40	+0.8
15,890	-		MPMX19_02782	0.40	+0.1
15,890	-		MPMX19_02782	0.40	-0.9
16,027	+		MPMX19_02782	0.58	-0.4
16,028	-		MPMX19_02782	0.58	-0.5
16,028	-		MPMX19_02782	0.58	+0.1
16,028	-		MPMX19_02782	0.58	-0.3
16,028	-		MPMX19_02782	0.58	-0.4
16,028	-		MPMX19_02782	0.58	-0.1
16,028	-		MPMX19_02782	0.58	-1.1
16,028	-		MPMX19_02782	0.58	-1.3
16,084	+		MPMX19_02782	0.65	-1.9
16,084	+		MPMX19_02782	0.65	-0.0
16,084	+		MPMX19_02782	0.65	+0.7
16,084	+		MPMX19_02782	0.65	-3.0
16,084	+		MPMX19_02782	0.65	-1.2
16,084	+		MPMX19_02782	0.65	+0.0
16,084	+		MPMX19_02782	0.65	+0.7
16,084	+		MPMX19_02782	0.65	-0.1
16,084	+		MPMX19_02782	0.65	-0.6
16,085	-		MPMX19_02782	0.65	+0.0
16,085	-		MPMX19_02782	0.65	+0.2
16,085	-		MPMX19_02782	0.65	-2.2
16,085	-		MPMX19_02782	0.65	-0.0
16,085	-		MPMX19_02782	0.65	-0.4
16,126	+		MPMX19_02782	0.71	-0.9
16,126	+		MPMX19_02782	0.71	+0.8
16,127	-		MPMX19_02782	0.71	-0.2
16,127	-		MPMX19_02782	0.71	-2.0
16,246	+		MPMX19_02782	0.86	-0.9
16,246	+		MPMX19_02782	0.86	-0.3
16,246	+		MPMX19_02782	0.86	-0.6
16,246	+		MPMX19_02782	0.86	-1.0
16,246	+		MPMX19_02782	0.86	-0.6
16,247	-		MPMX19_02782	0.87	-0.3
16,392	+				+1.6
16,392	+				-1.4
16,392	+				+1.6
16,393	-				+0.4
16,393	-				+0.0
16,393	-				+0.3
16,418	-				+1.0
16,678	+		MPMX19_02783	0.24	-0.0
16,678	+		MPMX19_02783	0.24	-0.3
16,678	+		MPMX19_02783	0.24	-0.4
16,678	+		MPMX19_02783	0.24	-0.6
16,678	+		MPMX19_02783	0.24	+0.7
16,678	+		MPMX19_02783	0.24	-1.3
16,679	-		MPMX19_02783	0.24	+0.4
16,679	-		MPMX19_02783	0.24	+2.6
16,972	+		MPMX19_02783	0.55	+0.8
16,972	+		MPMX19_02783	0.55	+0.1
16,972	+		MPMX19_02783	0.55	-0.5
16,972	+		MPMX19_02783	0.55	+0.9
16,972	+		MPMX19_02783	0.55	+0.7
16,973	-		MPMX19_02783	0.55	-0.7
16,973	-		MPMX19_02783	0.55	+0.2
16,973	-		MPMX19_02783	0.55	+0.0
16,973	-		MPMX19_02783	0.55	+0.0
16,973	-		MPMX19_02783	0.55	-0.6
17,035	+		MPMX19_02783	0.62	-0.2
17,035	+		MPMX19_02783	0.62	+0.3
17,035	+		MPMX19_02783	0.62	+2.0
17,035	+		MPMX19_02783	0.62	-0.7
17,035	+		MPMX19_02783	0.62	-2.1
17,036	-		MPMX19_02783	0.62	-0.1
17,036	-		MPMX19_02783	0.62	+1.0
17,036	-		MPMX19_02783	0.62	+0.0
17,036	-		MPMX19_02783	0.62	-0.4
17,036	-		MPMX19_02783	0.62	-1.7
17,036	-		MPMX19_02783	0.62	+0.6
17,041	+		MPMX19_02783	0.63	-0.5
17,042	-		MPMX19_02783	0.63	-0.9
17,266	+		MPMX19_02783	0.87	-0.7
17,266	+		MPMX19_02783	0.87	+0.3
17,266	+		MPMX19_02783	0.87	-0.0
17,266	+		MPMX19_02783	0.87	-0.2
17,266	+		MPMX19_02783	0.87	+0.5
17,267	-		MPMX19_02783	0.87	-0.5
17,267	-		MPMX19_02783	0.87	+0.4
17,267	-		MPMX19_02783	0.87	-0.1
17,267	-		MPMX19_02783	0.87	+1.0
17,267	-		MPMX19_02783	0.87	-0.4
17,267	-		MPMX19_02783	0.87	-1.7
17,267	-		MPMX19_02783	0.87	+0.4
17,274	-		MPMX19_02783	0.87	-0.3
17,274	-		MPMX19_02783	0.87	+1.0
17,312	+				-0.4
17,312	+				-0.4
17,385	+				-1.4
17,389	+				+0.4
17,389	+				-0.1
17,390	-				-0.7
17,390	-				+1.4
17,390	-				-0.0
17,390	-				-0.5
17,561	+		MPMX19_02784	0.22	+0.0
17,775	-		MPMX19_02784	0.52	+0.1
17,775	-		MPMX19_02784	0.52	+0.2
17,775	-		MPMX19_02784	0.52	-0.7
17,775	-		MPMX19_02784	0.52	-0.4
17,775	-		MPMX19_02784	0.52	+1.2
17,775	-		MPMX19_02784	0.52	-0.7
17,780	+		MPMX19_02784	0.53	-1.4
17,780	+		MPMX19_02784	0.53	-1.6
17,780	+		MPMX19_02784	0.53	+0.3
17,780	+		MPMX19_02784	0.53	-0.1
17,780	+		MPMX19_02784	0.53	-0.6
17,780	+		MPMX19_02784	0.53	+0.0
17,780	+		MPMX19_02784	0.53	-0.5
17,780	+		MPMX19_02784	0.53	-0.8
17,780	+		MPMX19_02784	0.53	-0.9
17,780	+		MPMX19_02784	0.53	-0.2
17,780	+		MPMX19_02784	0.53	+0.6
17,780	+		MPMX19_02784	0.53	-0.2
17,780	+		MPMX19_02784	0.53	-0.6
17,781	-		MPMX19_02784	0.53	-1.0
17,781	-		MPMX19_02784	0.53	-0.9
17,781	-		MPMX19_02784	0.53	-0.2
17,781	-		MPMX19_02784	0.53	+1.6
17,781	-		MPMX19_02784	0.53	+1.2
17,781	-		MPMX19_02784	0.53	+0.9
17,781	-		MPMX19_02784	0.53	-1.9
17,781	-		MPMX19_02784	0.53	+3.4
17,781	-		MPMX19_02784	0.53	-2.1
18,038	+		MPMX19_02784	0.89	+0.0
18,038	+		MPMX19_02784	0.89	+0.9
18,038	+		MPMX19_02784	0.89	+0.4
18,038	+		MPMX19_02784	0.89	-0.1
18,038	+		MPMX19_02784	0.89	-0.2
18,038	+		MPMX19_02784	0.89	-0.4
18,038	+		MPMX19_02784	0.89	-0.5
18,039	-		MPMX19_02784	0.89	-0.1
18,039	-		MPMX19_02784	0.89	-1.1
18,039	-		MPMX19_02784	0.89	+0.6
18,039	-		MPMX19_02784	0.89	+0.8
18,039	-		MPMX19_02784	0.89	-2.0
18,039	-		MPMX19_02784	0.89	+0.6
18,039	-		MPMX19_02784	0.89	+0.8
18,068	+				+0.9
18,069	-				-0.4
18,069	-				+0.6