Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02774

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
6,233	+		MPMX19_02773	0.42	+1.3
6,234	-		MPMX19_02773	0.42	+0.2
6,332	+		MPMX19_02773	0.50	-0.4
6,332	+		MPMX19_02773	0.50	-0.5
6,332	+		MPMX19_02773	0.50	-0.5
6,332	+		MPMX19_02773	0.50	+0.9
6,333	-		MPMX19_02773	0.50	+0.6
6,333	-		MPMX19_02773	0.50	-2.0
6,333	-		MPMX19_02773	0.50	+0.3
6,333	-		MPMX19_02773	0.50	+1.3
6,333	-		MPMX19_02773	0.50	-1.2
6,333	-		MPMX19_02773	0.50	-1.4
6,440	+		MPMX19_02773	0.58	-1.7
6,440	+		MPMX19_02773	0.58	+0.4
6,440	+		MPMX19_02773	0.58	-0.3
6,440	+		MPMX19_02773	0.58	-0.3
6,441	-		MPMX19_02773	0.58	+0.0
6,480	+		MPMX19_02773	0.61	-0.1
6,481	-		MPMX19_02773	0.61	-0.2
6,596	+		MPMX19_02773	0.69	-0.7
6,596	+		MPMX19_02773	0.69	-0.4
6,596	+		MPMX19_02773	0.69	+0.2
6,596	+		MPMX19_02773	0.69	-1.1
6,597	-		MPMX19_02773	0.69	-1.4
6,597	-		MPMX19_02773	0.69	-0.5
6,597	-		MPMX19_02773	0.69	+0.1
6,597	-		MPMX19_02773	0.69	-0.3
6,728	+		MPMX19_02773	0.79	-0.8
6,728	+		MPMX19_02773	0.79	-0.3
6,728	+		MPMX19_02773	0.79	+1.0
6,728	+		MPMX19_02773	0.79	+0.4
6,728	+		MPMX19_02773	0.79	-0.6
6,728	+		MPMX19_02773	0.79	-0.3
6,728	+		MPMX19_02773	0.79	-0.7
6,728	+		MPMX19_02773	0.79	-0.5
6,728	+		MPMX19_02773	0.79	+1.0
6,728	+		MPMX19_02773	0.79	-0.7
6,729	-		MPMX19_02773	0.79	+1.3
6,729	-		MPMX19_02773	0.79	+0.4
6,729	-		MPMX19_02773	0.79	-0.5
6,729	-		MPMX19_02773	0.79	+0.0
6,729	-		MPMX19_02773	0.79	-1.9
6,729	-		MPMX19_02773	0.79	+1.1
6,764	+		MPMX19_02773	0.82	+0.9
6,764	+		MPMX19_02773	0.82	-0.4
6,764	+		MPMX19_02773	0.82	+0.6
6,764	+		MPMX19_02773	0.82	+0.2
6,765	-		MPMX19_02773	0.82	-0.8
6,765	-		MPMX19_02773	0.82	-0.4
6,977	+				+0.6
6,978	-				-1.9
6,978	-				+0.6
7,042	+				+0.3
7,043	-				-0.9
7,066	+				-0.1
7,066	+				-1.5
7,067	-				+0.0
7,067	-				-0.2
7,087	+		MPMX19_02774	0.13	-0.6
7,087	+		MPMX19_02774	0.13	-0.5
7,087	+		MPMX19_02774	0.13	+0.1
7,087	+		MPMX19_02774	0.13	-1.0
7,087	+		MPMX19_02774	0.13	-2.6
7,087	+		MPMX19_02774	0.13	-0.6
7,087	+		MPMX19_02774	0.13	-0.8
7,088	-		MPMX19_02774	0.13	-0.8
7,088	-		MPMX19_02774	0.13	+0.9
7,088	-		MPMX19_02774	0.13	-1.1
7,088	-		MPMX19_02774	0.13	-1.6
7,088	-		MPMX19_02774	0.13	-1.0
7,520	-				+1.0
7,545	-				-2.0
7,545	-				-1.0
7,557	+				-0.2
7,557	+				+0.3
7,557	+				+0.0
7,557	+				+0.6
7,557	+				+1.6
7,557	+				-1.2
7,557	+				+0.4
7,557	+				+1.4
7,557	+				-0.5
7,557	+				-0.4
7,557	+				-1.1
7,557	+				-0.8
7,558	-				-1.3
7,558	-				+0.0
7,558	-				+0.7
7,558	-				-0.3
7,558	-				+0.9
7,558	-				-0.2
7,558	-				-0.7
7,558	-				-0.4
7,558	-				-1.2
7,558	-				+0.1
7,558	-				-2.6
7,696	-		MPMX19_02775	0.11	+1.0
7,905	+		MPMX19_02775	0.30	-0.5
7,905	+		MPMX19_02775	0.30	-0.9
7,905	+		MPMX19_02775	0.30	-0.6
7,905	+		MPMX19_02775	0.30	+0.6
7,905	+		MPMX19_02775	0.30	+1.0
7,905	+		MPMX19_02775	0.30	-0.2
7,905	+		MPMX19_02775	0.30	-0.5
7,905	+		MPMX19_02775	0.30	-0.3
7,905	+		MPMX19_02775	0.30	-0.4
7,905	+		MPMX19_02775	0.30	+0.0
7,906	-		MPMX19_02775	0.30	+0.8
7,906	-		MPMX19_02775	0.30	+0.1
7,906	-		MPMX19_02775	0.30	+0.1
7,906	-		MPMX19_02775	0.30	+0.6
7,906	-		MPMX19_02775	0.30	-0.8
7,957	-		MPMX19_02775	0.34	-0.7
7,957	-		MPMX19_02775	0.34	-0.6
7,957	-		MPMX19_02775	0.34	-0.1
7,957	-		MPMX19_02775	0.34	-0.3
7,957	-		MPMX19_02775	0.34	+1.0
7,957	-		MPMX19_02775	0.34	+0.1
7,957	-		MPMX19_02775	0.34	+0.3
7,974	+		MPMX19_02775	0.36	-2.2
7,974	+		MPMX19_02775	0.36	+0.8
7,974	+		MPMX19_02775	0.36	-0.8
7,974	+		MPMX19_02775	0.36	+0.3
7,974	+		MPMX19_02775	0.36	+0.1
7,974	+		MPMX19_02775	0.36	-0.7
7,974	+		MPMX19_02775	0.36	+0.7
7,974	+		MPMX19_02775	0.36	-1.2
7,975	-		MPMX19_02775	0.36	+0.8
8,016	+		MPMX19_02775	0.40	-2.4
8,016	+		MPMX19_02775	0.40	-0.3
8,016	+		MPMX19_02775	0.40	-0.2
8,016	+		MPMX19_02775	0.40	+0.2
8,016	+		MPMX19_02775	0.40	-0.5
8,017	-		MPMX19_02775	0.40	+0.7
8,017	-		MPMX19_02775	0.40	-1.7
8,017	-		MPMX19_02775	0.40	+0.0
8,017	-		MPMX19_02775	0.40	+0.6
8,017	-		MPMX19_02775	0.40	-0.3
8,017	-		MPMX19_02775	0.40	+2.4
8,017	-		MPMX19_02775	0.40	+0.5
8,226	+		MPMX19_02775	0.59	-0.3
8,226	+		MPMX19_02775	0.59	-2.5
8,226	+		MPMX19_02775	0.59	-1.0
8,227	-		MPMX19_02775	0.59	-0.7
8,227	-		MPMX19_02775	0.59	+0.3
8,242	-		MPMX19_02775	0.60	-0.7
8,242	-		MPMX19_02775	0.60	+0.9
8,301	+		MPMX19_02775	0.65	-0.2
8,301	+		MPMX19_02775	0.65	-2.8
8,302	-		MPMX19_02775	0.65	+0.0
8,302	-		MPMX19_02775	0.65	-0.2
8,302	-		MPMX19_02775	0.65	-0.1
8,319	+		MPMX19_02775	0.67	+0.5
8,319	+		MPMX19_02775	0.67	-0.4
8,319	+		MPMX19_02775	0.67	+0.3
8,319	+		MPMX19_02775	0.67	-1.1
8,320	-		MPMX19_02775	0.67	+0.6
8,321	+		MPMX19_02775	0.67	-0.9
8,322	-		MPMX19_02775	0.67	+0.7
8,322	-		MPMX19_02775	0.67	+1.6
8,322	-		MPMX19_02775	0.67	+0.6
8,322	-		MPMX19_02775	0.67	-1.6
8,481	+		MPMX19_02775	0.82	+0.0
8,481	+		MPMX19_02775	0.82	-1.0
8,481	+		MPMX19_02775	0.82	+0.0
8,481	+		MPMX19_02775	0.82	+0.3
8,481	+		MPMX19_02775	0.82	-0.2
8,481	+		MPMX19_02775	0.82	-0.1
8,481	+		MPMX19_02775	0.82	+1.0
8,482	-		MPMX19_02775	0.82	-0.4
8,482	-		MPMX19_02775	0.82	-0.1
8,482	-		MPMX19_02775	0.82	-0.2
8,482	-		MPMX19_02775	0.82	+1.8
8,482	-		MPMX19_02775	0.82	-0.1
8,482	-		MPMX19_02775	0.82	-0.4
8,482	-		MPMX19_02775	0.82	-0.1
8,482	-		MPMX19_02775	0.82	+0.1
8,482	-		MPMX19_02775	0.82	+0.2