Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02617

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,733,608	+		MPMX19_02616	0.73	+0.7
2,733,608	+		MPMX19_02616	0.73	+0.2
2,733,608	+		MPMX19_02616	0.73	-2.2
2,733,608	+		MPMX19_02616	0.73	+0.3
2,733,609	-		MPMX19_02616	0.73	+0.3
2,733,609	-		MPMX19_02616	0.73	+0.3
2,733,609	-		MPMX19_02616	0.73	+0.3
2,733,609	-		MPMX19_02616	0.73	+1.7
2,733,609	-		MPMX19_02616	0.73	+1.2
2,733,609	-		MPMX19_02616	0.73	+0.2
2,733,609	-		MPMX19_02616	0.73	-0.2
2,733,609	-		MPMX19_02616	0.73	-0.7
2,733,609	-		MPMX19_02616	0.73	+0.2
2,733,666	+		MPMX19_02616	0.76	-0.3
2,733,666	+		MPMX19_02616	0.76	-1.1
2,733,666	+		MPMX19_02616	0.76	-1.2
2,733,666	+		MPMX19_02616	0.76	+0.5
2,733,666	+		MPMX19_02616	0.76	-1.0
2,733,666	+		MPMX19_02616	0.76	-0.1
2,733,666	+		MPMX19_02616	0.76	-0.0
2,733,666	+		MPMX19_02616	0.76	+0.2
2,733,666	+		MPMX19_02616	0.76	-1.1
2,733,666	+		MPMX19_02616	0.76	-0.6
2,733,666	+		MPMX19_02616	0.76	+0.2
2,733,666	+		MPMX19_02616	0.76	-0.0
2,733,666	+		MPMX19_02616	0.76	-0.5
2,733,666	+		MPMX19_02616	0.76	-0.8
2,733,666	+		MPMX19_02616	0.76	-1.3
2,733,666	+		MPMX19_02616	0.76	+1.5
2,733,666	+		MPMX19_02616	0.76	+0.1
2,733,666	+		MPMX19_02616	0.76	-0.7
2,733,667	-		MPMX19_02616	0.76	+0.2
2,733,667	-		MPMX19_02616	0.76	-0.8
2,733,667	-		MPMX19_02616	0.76	+0.2
2,733,667	-		MPMX19_02616	0.76	-2.3
2,733,667	-		MPMX19_02616	0.76	-0.5
2,733,667	-		MPMX19_02616	0.76	-0.5
2,733,667	-		MPMX19_02616	0.76	-0.1
2,733,667	-		MPMX19_02616	0.76	-0.8
2,733,667	-		MPMX19_02616	0.76	-0.1
2,733,667	-		MPMX19_02616	0.76	-0.1
2,733,667	-		MPMX19_02616	0.76	-0.7
2,733,667	-		MPMX19_02616	0.76	-2.2
2,733,741	+		MPMX19_02616	0.80	+0.0
2,733,741	+		MPMX19_02616	0.80	+0.8
2,733,741	+		MPMX19_02616	0.80	+2.2
2,733,741	+		MPMX19_02616	0.80	-1.4
2,733,741	+		MPMX19_02616	0.80	-0.8
2,733,741	+		MPMX19_02616	0.80	+1.3
2,733,741	+		MPMX19_02616	0.80	+1.3
2,733,741	+		MPMX19_02616	0.80	+1.4
2,733,741	+		MPMX19_02616	0.80	+0.7
2,733,741	+		MPMX19_02616	0.80	+0.5
2,733,741	+		MPMX19_02616	0.80	-0.3
2,733,741	+		MPMX19_02616	0.80	-0.3
2,733,741	+		MPMX19_02616	0.80	+0.7
2,733,741	+		MPMX19_02616	0.80	-1.3
2,733,741	+		MPMX19_02616	0.80	+0.6
2,733,741	+		MPMX19_02616	0.80	-0.2
2,733,741	+		MPMX19_02616	0.80	+1.2
2,733,741	+		MPMX19_02616	0.80	+0.0
2,733,741	+		MPMX19_02616	0.80	-1.1
2,733,741	+		MPMX19_02616	0.80	+0.2
2,733,741	+		MPMX19_02616	0.80	+0.7
2,733,741	+		MPMX19_02616	0.80	+0.3
2,733,741	+		MPMX19_02616	0.80	+0.7
2,733,742	-		MPMX19_02616	0.81	-1.2
2,733,742	-		MPMX19_02616	0.81	+1.2
2,733,742	-		MPMX19_02616	0.81	+1.0
2,733,742	-		MPMX19_02616	0.81	-0.8
2,733,742	-		MPMX19_02616	0.81	+1.2
2,733,742	-		MPMX19_02616	0.81	-0.8
2,733,742	-		MPMX19_02616	0.81	-0.5
2,733,742	-		MPMX19_02616	0.81	-0.4
2,733,742	-		MPMX19_02616	0.81	-0.7
2,733,742	-		MPMX19_02616	0.81	-0.3
2,733,742	-		MPMX19_02616	0.81	-0.1
2,733,742	-		MPMX19_02616	0.81	-0.3
2,733,742	-		MPMX19_02616	0.81	-0.1
2,733,742	-		MPMX19_02616	0.81	-0.6
2,733,742	-		MPMX19_02616	0.81	-1.1
2,733,742	-		MPMX19_02616	0.81	-1.2
2,733,742	-		MPMX19_02616	0.81	-0.6
2,733,742	-		MPMX19_02616	0.81	+1.4
2,733,742	-		MPMX19_02616	0.81	+0.4
2,733,742	-		MPMX19_02616	0.81	-1.8
2,733,742	-		MPMX19_02616	0.81	+0.7
2,733,742	-		MPMX19_02616	0.81	-0.8
2,733,742	-		MPMX19_02616	0.81	-2.0
2,733,742	-		MPMX19_02616	0.81	-0.1
2,733,742	-		MPMX19_02616	0.81	-0.7
2,733,742	-		MPMX19_02616	0.81	-1.0
2,733,742	-		MPMX19_02616	0.81	-0.1
2,733,742	-		MPMX19_02616	0.81	+0.3
2,733,858	+		MPMX19_02616	0.87	+0.4
2,733,858	+		MPMX19_02616	0.87	-0.2
2,733,858	+		MPMX19_02616	0.87	-1.2
2,733,858	+		MPMX19_02616	0.87	+1.2
2,733,858	+		MPMX19_02616	0.87	-1.7
2,733,858	+		MPMX19_02616	0.87	+0.7
2,733,858	+		MPMX19_02616	0.87	-1.2
2,733,858	+		MPMX19_02616	0.87	+0.0
2,733,858	+		MPMX19_02616	0.87	-3.7
2,733,858	+		MPMX19_02616	0.87	-0.7
2,733,858	+		MPMX19_02616	0.87	-0.2
2,733,858	+		MPMX19_02616	0.87	-2.3
2,733,858	+		MPMX19_02616	0.87	-1.3
2,733,858	+		MPMX19_02616	0.87	+0.2
2,733,858	+		MPMX19_02616	0.87	-0.7
2,733,858	+		MPMX19_02616	0.87	-1.0
2,733,858	+		MPMX19_02616	0.87	+0.6
2,733,858	+		MPMX19_02616	0.87	-0.2
2,733,858	+		MPMX19_02616	0.87	+0.0
2,733,858	+		MPMX19_02616	0.87	+0.2
2,733,858	+		MPMX19_02616	0.87	+0.4
2,733,858	+		MPMX19_02616	0.87	+0.5
2,733,858	+		MPMX19_02616	0.87	+1.3
2,733,858	+		MPMX19_02616	0.87	+0.7
2,733,858	+		MPMX19_02616	0.87	-0.1
2,733,858	+		MPMX19_02616	0.87	+0.6
2,733,858	+		MPMX19_02616	0.87	+0.4
2,733,858	+		MPMX19_02616	0.87	-3.2
2,733,858	+		MPMX19_02616	0.87	+0.1
2,733,858	+		MPMX19_02616	0.87	+0.7
2,733,858	+		MPMX19_02616	0.87	+0.5
2,733,858	+		MPMX19_02616	0.87	+0.0
2,733,858	+		MPMX19_02616	0.87	+0.2
2,733,858	+		MPMX19_02616	0.87	+0.5
2,733,858	+		MPMX19_02616	0.87	-0.3
2,733,858	+		MPMX19_02616	0.87	+1.0
2,733,858	+		MPMX19_02616	0.87	-0.7
2,733,858	+		MPMX19_02616	0.87	-0.1
2,733,858	+		MPMX19_02616	0.87	+0.4
2,733,859	-		MPMX19_02616	0.87	-0.7
2,733,859	-		MPMX19_02616	0.87	-0.4
2,733,859	-		MPMX19_02616	0.87	+0.2
2,733,859	-		MPMX19_02616	0.87	+0.2
2,733,859	-		MPMX19_02616	0.87	+0.2
2,733,859	-		MPMX19_02616	0.87	+0.4
2,733,859	-		MPMX19_02616	0.87	-1.3
2,733,859	-		MPMX19_02616	0.87	-1.7
2,733,859	-		MPMX19_02616	0.87	-1.1
2,733,859	-		MPMX19_02616	0.87	+0.2
2,733,859	-		MPMX19_02616	0.87	-0.6
2,733,859	-		MPMX19_02616	0.87	-0.2
2,733,859	-		MPMX19_02616	0.87	-1.0
2,733,859	-		MPMX19_02616	0.87	-1.7
2,733,859	-		MPMX19_02616	0.87	+0.1
2,733,859	-		MPMX19_02616	0.87	+0.1
2,733,859	-		MPMX19_02616	0.87	-0.3
2,733,859	-		MPMX19_02616	0.87	+0.7
2,733,859	-		MPMX19_02616	0.87	+0.1
2,733,859	-		MPMX19_02616	0.87	+0.6
2,733,859	-		MPMX19_02616	0.87	-0.5
2,733,859	-		MPMX19_02616	0.87	-0.6
2,733,859	-		MPMX19_02616	0.87	+0.9
2,733,859	-		MPMX19_02616	0.87	-0.3
2,733,859	-		MPMX19_02616	0.87	-0.6
2,733,859	-		MPMX19_02616	0.87	+1.7
2,733,859	-		MPMX19_02616	0.87	+0.3
2,733,859	-		MPMX19_02616	0.87	+0.9
2,733,859	-		MPMX19_02616	0.87	+0.9
2,733,859	-		MPMX19_02616	0.87	+0.6
2,733,859	-		MPMX19_02616	0.87	+1.5
2,733,859	-		MPMX19_02616	0.87	+2.1
2,733,859	-		MPMX19_02616	0.87	+1.7
2,733,859	-		MPMX19_02616	0.87	-0.8
2,733,859	-		MPMX19_02616	0.87	-1.1
2,733,859	-		MPMX19_02616	0.87	+0.3
2,733,859	-		MPMX19_02616	0.87	-0.1
2,733,859	-		MPMX19_02616	0.87	+1.0
2,733,859	-		MPMX19_02616	0.87	-0.1
2,733,859	-		MPMX19_02616	0.87	+0.7
2,733,859	-		MPMX19_02616	0.87	+0.0
2,733,859	-		MPMX19_02616	0.87	-1.2
2,733,859	-		MPMX19_02616	0.87	-2.3
2,733,859	-		MPMX19_02616	0.87	-0.8
2,733,859	-		MPMX19_02616	0.87	+0.7
2,733,859	-		MPMX19_02616	0.87	-0.3
2,733,859	-		MPMX19_02616	0.87	+0.5
2,733,859	-		MPMX19_02616	0.87	-0.8
2,733,984	+				+1.3
2,733,984	+				-0.4
2,733,984	+				+0.6
2,733,984	+				+0.6
2,733,984	+				+0.3
2,733,984	+				-1.4
2,733,984	+				-2.9
2,733,984	+				-0.3
2,733,984	+				-0.1
2,733,984	+				-1.4
2,733,984	+				-0.4
2,733,984	+				+0.1
2,733,985	-				-0.2
2,733,985	-				-1.6
2,733,985	-				-0.8
2,733,985	-				+1.3
2,733,985	-				+1.7
2,733,985	-				-1.4
2,733,985	-				-1.2
2,733,985	-				-0.7
2,733,985	-				+0.3
2,733,985	-				+0.9
2,733,985	-				-0.6
2,733,985	-				-0.3
2,733,985	-				+0.6
2,733,985	-				-1.1
2,733,985	-				-1.8
2,733,985	-				-0.4
2,734,087	+				+1.4
2,734,087	+				-1.4
2,734,087	+				+1.0
2,734,087	+				-0.1
2,734,087	+				-0.7
2,734,087	+				-1.0
2,734,088	-				-1.4
2,734,088	-				+1.3
2,734,088	-				-0.1
2,734,096	+				-0.3
2,734,096	+				-0.9
2,734,096	+				-0.8
2,734,096	+				+1.4
2,734,096	+				-0.1
2,734,097	-				+0.2
2,734,097	-				+0.0
2,734,097	-				+0.7
2,734,097	-				+0.2
2,734,097	-				+0.6
2,734,097	-				-0.1
2,734,299	+				-0.6
2,734,300	-				-0.8
2,734,300	-				+0.2
2,734,300	-				+0.6
2,734,692	-		MPMX19_02617	0.13	-0.0
2,734,741	+		MPMX19_02617	0.19	+1.3
2,734,741	+		MPMX19_02617	0.19	+0.0
2,734,741	+		MPMX19_02617	0.19	-1.8
2,734,741	+		MPMX19_02617	0.19	-0.3
2,734,742	-		MPMX19_02617	0.19	-0.8
2,734,742	-		MPMX19_02617	0.19	-1.1
2,734,742	-		MPMX19_02617	0.19	+0.2
2,734,742	-		MPMX19_02617	0.19	+0.5
2,734,742	-		MPMX19_02617	0.19	+0.3
2,734,742	-		MPMX19_02617	0.19	-1.4
2,734,742	-		MPMX19_02617	0.19	-1.3
2,734,837	+		MPMX19_02617	0.30	-1.1
2,734,838	-		MPMX19_02617	0.30	-0.4
2,734,984	+		MPMX19_02617	0.47	-2.6
2,734,984	+		MPMX19_02617	0.47	+0.1
2,734,984	+		MPMX19_02617	0.47	-0.1
2,734,984	+		MPMX19_02617	0.47	-1.4
2,734,984	+		MPMX19_02617	0.47	-0.7
2,734,985	-		MPMX19_02617	0.48	-0.5
2,734,985	-		MPMX19_02617	0.48	+0.3
2,734,985	-		MPMX19_02617	0.48	+0.0
2,735,011	+		MPMX19_02617	0.51	-0.7
2,735,011	+		MPMX19_02617	0.51	-2.5
2,735,011	+		MPMX19_02617	0.51	-0.4
2,735,011	+		MPMX19_02617	0.51	-0.4
2,735,011	+		MPMX19_02617	0.51	+0.2
2,735,011	+		MPMX19_02617	0.51	-0.3
2,735,011	+		MPMX19_02617	0.51	-0.6
2,735,011	+		MPMX19_02617	0.51	+0.5
2,735,011	+		MPMX19_02617	0.51	+0.2
2,735,011	+		MPMX19_02617	0.51	+1.4
2,735,012	-		MPMX19_02617	0.51	-0.3
2,735,012	-		MPMX19_02617	0.51	-0.3
2,735,012	-		MPMX19_02617	0.51	-2.1
2,735,012	-		MPMX19_02617	0.51	-2.3
2,735,012	-		MPMX19_02617	0.51	-0.3
2,735,012	-		MPMX19_02617	0.51	+0.7
2,735,041	+		MPMX19_02617	0.54	-0.4
2,735,041	+		MPMX19_02617	0.54	-0.4
2,735,042	-		MPMX19_02617	0.54	-0.4
2,735,254	+		MPMX19_02617	0.79	+0.8
2,735,254	+		MPMX19_02617	0.79	-0.6
2,735,254	+		MPMX19_02617	0.79	+0.3
2,735,255	-		MPMX19_02617	0.79	+0.6
2,735,255	-		MPMX19_02617	0.79	-0.9
2,735,559	+				-0.7
2,735,559	+				-0.2
2,735,560	-				+0.3
2,735,569	+				-1.6
2,735,569	+				-0.6
2,735,569	+				+0.7
2,735,569	+				-0.8
2,735,570	-				+0.6
2,735,570	-				-0.2
2,735,570	-				+0.3
2,735,570	-				+0.1
2,735,605	+				+0.4
2,735,605	+				+0.8
2,735,605	+				-0.1
2,735,605	+				-1.1
2,735,621	+				+1.5
2,735,621	+				-0.2
2,735,622	-				-1.0
2,735,626	+				-1.3
2,735,626	+				+0.2
2,735,626	+				-0.2
2,735,626	+				+0.7
2,735,626	+				-1.4
2,735,627	-				+0.3
2,735,627	-				-1.6
2,735,648	-				-1.9
2,735,665	+				-0.8
2,735,746	+				-0.7
2,735,746	+				-0.1
2,735,747	-				-2.0
2,735,747	-				-2.8
2,735,747	-				+0.2
2,735,756	+				+0.7
2,735,756	+				-1.0
2,735,756	+				+1.7
2,735,756	+				+0.2
2,735,856	+		MPMX19_02618	0.13	-1.1
2,735,856	+		MPMX19_02618	0.13	-1.3
2,736,321	+		MPMX19_02618	0.80	-0.7
2,736,336	+		MPMX19_02618	0.82	-1.4
2,736,336	+		MPMX19_02618	0.82	-0.5
2,736,336	+		MPMX19_02618	0.82	-0.3
2,736,337	-		MPMX19_02618	0.82	-0.3