Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02558 and MPMX19_02559 overlap by 4 nucleotides MPMX19_02559 and MPMX19_02560 overlap by 4 nucleotides MPMX19_02560 and MPMX19_02561 are separated by 10 nucleotides
MPMX19_02558: MPMX19_02558 - Putative pyruvate, phosphate dikinase regulatory protein, at 2,674,734 to 2,675,573
_02558
MPMX19_02559: MPMX19_02559 - 7-methyl-GTP pyrophosphatase, at 2,675,570 to 2,676,175
_02559
MPMX19_02560: MPMX19_02560 - Shikimate dehydrogenase (NADP(+)), at 2,676,172 to 2,677,044
_02560
MPMX19_02561: MPMX19_02561 - Dephospho-CoA kinase, at 2,677,055 to 2,677,714
_02561
Position (kb)
2675
2676
2677 Strain fitness (log2 ratio)
-2
-1
0
1 at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2675.085 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2676.005 kb on + strand, within MPMX19_02559 at 2676.005 kb on + strand, within MPMX19_02559 at 2676.005 kb on + strand, within MPMX19_02559 at 2676.005 kb on + strand, within MPMX19_02559 at 2676.005 kb on + strand, within MPMX19_02559 at 2676.005 kb on + strand, within MPMX19_02559 at 2676.050 kb on + strand, within MPMX19_02559 at 2676.050 kb on + strand, within MPMX19_02559 at 2676.050 kb on + strand, within MPMX19_02559
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 2,674,750 + -0.3 2,674,750 + +0.2 2,674,750 + +0.5 2,674,750 + -1.8 2,674,750 + +0.6 2,674,750 + -0.6 2,674,750 + -0.1 2,674,750 + -0.9 2,675,085 + MPMX19_02558 0.42 -0.7 2,675,214 + MPMX19_02558 0.57 -0.3 2,675,214 + MPMX19_02558 0.57 +0.5 2,675,214 + MPMX19_02558 0.57 +0.5 2,675,214 + MPMX19_02558 0.57 +1.4 2,675,214 + MPMX19_02558 0.57 -1.3 2,676,005 + MPMX19_02559 0.72 -0.8 2,676,005 + MPMX19_02559 0.72 +0.6 2,676,005 + MPMX19_02559 0.72 -0.8 2,676,005 + MPMX19_02559 0.72 -1.7 2,676,005 + MPMX19_02559 0.72 -1.7 2,676,005 + MPMX19_02559 0.72 -0.3 2,676,050 + MPMX19_02559 0.79 +0.7 2,676,050 + MPMX19_02559 0.79 -0.3 2,676,050 + MPMX19_02559 0.79 -0.6
Or see this region's nucleotide sequence