Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02556 and MPMX19_02557 are separated by 92 nucleotides MPMX19_02557 and MPMX19_02558 are separated by 436 nucleotides
MPMX19_02556: MPMX19_02556 - Ferrochelatase, at 2,671,947 to 2,673,101
_02556
MPMX19_02557: MPMX19_02557 - Uroporphyrinogen decarboxylase, at 2,673,194 to 2,674,297
_02557
MPMX19_02558: MPMX19_02558 - Putative pyruvate, phosphate dikinase regulatory protein, at 2,674,734 to 2,675,573
_02558
Position (kb)
2673
2674
2675 Strain fitness (log2 ratio)
-2
-1
0
1 at 2673.112 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2673.170 kb on - strand at 2674.361 kb on - strand at 2674.361 kb on - strand at 2674.361 kb on - strand at 2674.378 kb on - strand at 2674.378 kb on - strand at 2674.378 kb on - strand at 2674.380 kb on - strand at 2674.380 kb on - strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2674.750 kb on + strand at 2675.085 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558 at 2675.214 kb on + strand, within MPMX19_02558
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 2,673,112 - +0.6 2,673,170 - -2.3 2,673,170 - -1.1 2,673,170 - +0.2 2,673,170 - +0.2 2,673,170 - -1.2 2,673,170 - +0.5 2,673,170 - +0.2 2,673,170 - -0.4 2,673,170 - -0.3 2,673,170 - -1.4 2,673,170 - -0.6 2,673,170 - -1.3 2,673,170 - +0.4 2,673,170 - -0.4 2,674,361 - -0.2 2,674,361 - +0.9 2,674,361 - +0.6 2,674,378 - +0.9 2,674,378 - -0.4 2,674,378 - -0.1 2,674,380 - +0.6 2,674,380 - -0.1 2,674,750 + -0.3 2,674,750 + +0.2 2,674,750 + +0.5 2,674,750 + -1.8 2,674,750 + +0.6 2,674,750 + -0.6 2,674,750 + -0.1 2,674,750 + -0.9 2,675,085 + MPMX19_02558 0.42 -0.7 2,675,214 + MPMX19_02558 0.57 -0.3 2,675,214 + MPMX19_02558 0.57 +0.5 2,675,214 + MPMX19_02558 0.57 +0.5 2,675,214 + MPMX19_02558 0.57 +1.4 2,675,214 + MPMX19_02558 0.57 -1.3
Or see this region's nucleotide sequence