Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02523 and MPMX19_02524 overlap by 11 nucleotides MPMX19_02524 and MPMX19_02525 are separated by 14 nucleotides MPMX19_02525 and MPMX19_02526 are separated by 347 nucleotides
MPMX19_02523: MPMX19_02523 - Ribosome-binding factor A, at 2,643,582 to 2,644,196
_02523
MPMX19_02524: MPMX19_02524 - tRNA pseudouridine synthase B, at 2,644,186 to 2,645,127
_02524
MPMX19_02525: MPMX19_02525 - 30S ribosomal protein S15, at 2,645,142 to 2,645,411
_02525
MPMX19_02526: MPMX19_02526 - Polyribonucleotide nucleotidyltransferase, at 2,645,759 to 2,647,870
_02526
Position (kb)
2645
2646 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2644.194 kb on + strand at 2644.194 kb on + strand at 2644.194 kb on + strand at 2644.194 kb on + strand at 2644.195 kb on - strand at 2644.195 kb on - strand at 2644.195 kb on - strand at 2644.195 kb on - strand at 2644.195 kb on - strand at 2644.384 kb on + strand, within MPMX19_02524 at 2644.384 kb on + strand, within MPMX19_02524 at 2644.384 kb on + strand, within MPMX19_02524 at 2644.384 kb on + strand, within MPMX19_02524 at 2644.384 kb on + strand, within MPMX19_02524 at 2644.384 kb on + strand, within MPMX19_02524 at 2644.384 kb on + strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.385 kb on - strand, within MPMX19_02524 at 2644.408 kb on + strand, within MPMX19_02524 at 2644.409 kb on - strand, within MPMX19_02524 at 2644.409 kb on - strand, within MPMX19_02524 at 2644.409 kb on - strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.591 kb on + strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.592 kb on - strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.720 kb on + strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2644.721 kb on - strand, within MPMX19_02524 at 2645.511 kb on + strand at 2645.511 kb on + strand at 2645.511 kb on + strand at 2645.511 kb on + strand at 2645.536 kb on + strand at 2645.545 kb on + strand at 2645.545 kb on + strand at 2645.629 kb on + strand at 2645.629 kb on + strand at 2645.629 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.664 kb on + strand at 2645.689 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 2,644,194 + +0.0 2,644,194 + +0.9 2,644,194 + +1.5 2,644,194 + +1.1 2,644,195 - +0.2 2,644,195 - +0.2 2,644,195 - -1.4 2,644,195 - -0.3 2,644,195 - -2.0 2,644,384 + MPMX19_02524 0.21 +0.2 2,644,384 + MPMX19_02524 0.21 +1.0 2,644,384 + MPMX19_02524 0.21 +0.6 2,644,384 + MPMX19_02524 0.21 -0.4 2,644,384 + MPMX19_02524 0.21 -0.7 2,644,384 + MPMX19_02524 0.21 +0.6 2,644,384 + MPMX19_02524 0.21 -0.1 2,644,385 - MPMX19_02524 0.21 -0.6 2,644,385 - MPMX19_02524 0.21 -0.4 2,644,385 - MPMX19_02524 0.21 -0.3 2,644,385 - MPMX19_02524 0.21 +0.4 2,644,385 - MPMX19_02524 0.21 -1.0 2,644,385 - MPMX19_02524 0.21 -0.3 2,644,385 - MPMX19_02524 0.21 -0.7 2,644,385 - MPMX19_02524 0.21 +0.2 2,644,385 - MPMX19_02524 0.21 -0.4 2,644,408 + MPMX19_02524 0.24 +1.3 2,644,409 - MPMX19_02524 0.24 -0.8 2,644,409 - MPMX19_02524 0.24 +0.9 2,644,409 - MPMX19_02524 0.24 +0.6 2,644,591 + MPMX19_02524 0.43 -1.1 2,644,591 + MPMX19_02524 0.43 -1.6 2,644,591 + MPMX19_02524 0.43 -0.7 2,644,591 + MPMX19_02524 0.43 +0.2 2,644,591 + MPMX19_02524 0.43 -1.3 2,644,591 + MPMX19_02524 0.43 +0.4 2,644,591 + MPMX19_02524 0.43 +0.4 2,644,591 + MPMX19_02524 0.43 -0.3 2,644,591 + MPMX19_02524 0.43 +1.2 2,644,591 + MPMX19_02524 0.43 -0.3 2,644,592 - MPMX19_02524 0.43 +0.2 2,644,592 - MPMX19_02524 0.43 -0.1 2,644,592 - MPMX19_02524 0.43 -0.8 2,644,592 - MPMX19_02524 0.43 +0.5 2,644,592 - MPMX19_02524 0.43 +0.6 2,644,592 - MPMX19_02524 0.43 +0.7 2,644,592 - MPMX19_02524 0.43 -0.1 2,644,592 - MPMX19_02524 0.43 -1.0 2,644,592 - MPMX19_02524 0.43 -0.1 2,644,592 - MPMX19_02524 0.43 -0.1 2,644,592 - MPMX19_02524 0.43 -0.4 2,644,592 - MPMX19_02524 0.43 +0.2 2,644,720 + MPMX19_02524 0.57 +0.9 2,644,720 + MPMX19_02524 0.57 -0.3 2,644,720 + MPMX19_02524 0.57 +0.6 2,644,720 + MPMX19_02524 0.57 -1.3 2,644,720 + MPMX19_02524 0.57 +1.3 2,644,720 + MPMX19_02524 0.57 -0.6 2,644,720 + MPMX19_02524 0.57 +1.5 2,644,720 + MPMX19_02524 0.57 +0.3 2,644,720 + MPMX19_02524 0.57 +0.2 2,644,720 + MPMX19_02524 0.57 +0.2 2,644,720 + MPMX19_02524 0.57 -0.1 2,644,720 + MPMX19_02524 0.57 -1.7 2,644,720 + MPMX19_02524 0.57 +0.8 2,644,720 + MPMX19_02524 0.57 -0.6 2,644,720 + MPMX19_02524 0.57 +0.3 2,644,720 + MPMX19_02524 0.57 +0.5 2,644,720 + MPMX19_02524 0.57 -0.1 2,644,720 + MPMX19_02524 0.57 -0.8 2,644,720 + MPMX19_02524 0.57 +0.7 2,644,720 + MPMX19_02524 0.57 +0.5 2,644,720 + MPMX19_02524 0.57 +1.1 2,644,720 + MPMX19_02524 0.57 -0.0 2,644,720 + MPMX19_02524 0.57 -0.7 2,644,720 + MPMX19_02524 0.57 -1.0 2,644,720 + MPMX19_02524 0.57 -1.6 2,644,720 + MPMX19_02524 0.57 +1.5 2,644,720 + MPMX19_02524 0.57 +0.4 2,644,721 - MPMX19_02524 0.57 +0.5 2,644,721 - MPMX19_02524 0.57 +0.3 2,644,721 - MPMX19_02524 0.57 -0.8 2,644,721 - MPMX19_02524 0.57 -0.7 2,644,721 - MPMX19_02524 0.57 +0.3 2,644,721 - MPMX19_02524 0.57 -0.2 2,644,721 - MPMX19_02524 0.57 +1.5 2,644,721 - MPMX19_02524 0.57 -0.8 2,644,721 - MPMX19_02524 0.57 -1.7 2,644,721 - MPMX19_02524 0.57 +0.0 2,644,721 - MPMX19_02524 0.57 +1.5 2,644,721 - MPMX19_02524 0.57 +0.2 2,644,721 - MPMX19_02524 0.57 +0.3 2,644,721 - MPMX19_02524 0.57 +0.7 2,644,721 - MPMX19_02524 0.57 +0.2 2,644,721 - MPMX19_02524 0.57 -1.8 2,644,721 - MPMX19_02524 0.57 -1.0 2,644,721 - MPMX19_02524 0.57 -0.2 2,644,721 - MPMX19_02524 0.57 -2.0 2,644,721 - MPMX19_02524 0.57 -0.2 2,644,721 - MPMX19_02524 0.57 +0.6 2,644,721 - MPMX19_02524 0.57 -0.6 2,644,721 - MPMX19_02524 0.57 +0.2 2,644,721 - MPMX19_02524 0.57 +0.3 2,644,721 - MPMX19_02524 0.57 -0.6 2,644,721 - MPMX19_02524 0.57 -0.1 2,644,721 - MPMX19_02524 0.57 -0.0 2,644,721 - MPMX19_02524 0.57 +0.1 2,644,721 - MPMX19_02524 0.57 +0.8 2,644,721 - MPMX19_02524 0.57 -0.4 2,644,721 - MPMX19_02524 0.57 -1.5 2,645,511 + +0.4 2,645,511 + -0.8 2,645,511 + -0.6 2,645,511 + -1.8 2,645,536 + +0.2 2,645,545 + +1.0 2,645,545 + -2.0 2,645,629 + +0.2 2,645,629 + -1.3 2,645,629 + +0.7 2,645,664 + +0.2 2,645,664 + -0.6 2,645,664 + -0.5 2,645,664 + -0.1 2,645,664 + -2.8 2,645,664 + -0.2 2,645,664 + -2.2 2,645,664 + -0.1 2,645,664 + -0.7 2,645,689 + -0.4
Or see this region's nucleotide sequence