Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02509 and MPMX19_02510 are separated by 487 nucleotides MPMX19_02510 and MPMX19_02511 are separated by 181 nucleotides
MPMX19_02509: MPMX19_02509 - Protein ApaG, at 2,626,469 to 2,626,861
_02509
MPMX19_02510: MPMX19_02510 - hypothetical protein, at 2,627,349 to 2,628,053
_02510
MPMX19_02511: MPMX19_02511 - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase, at 2,628,235 to 2,629,629
_02511
Position (kb)
2627
2628
2629 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.349 kb on - strand at 2626.411 kb on + strand at 2626.412 kb on - strand at 2626.416 kb on + strand at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.560 kb on + strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.561 kb on - strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.611 kb on + strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.612 kb on - strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.764 kb on + strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.765 kb on - strand, within MPMX19_02509 at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.857 kb on + strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.858 kb on - strand at 2626.916 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.989 kb on + strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2626.990 kb on - strand at 2627.056 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.058 kb on + strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.059 kb on - strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.115 kb on + strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.116 kb on - strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.117 kb on + strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2627.118 kb on - strand at 2628.088 kb on + strand at 2628.088 kb on + strand at 2628.088 kb on + strand at 2628.088 kb on + strand at 2628.089 kb on - strand at 2628.089 kb on - strand at 2628.089 kb on - strand at 2628.089 kb on - strand at 2628.089 kb on - strand at 2628.089 kb on - strand at 2628.135 kb on + strand at 2628.135 kb on + strand at 2628.135 kb on + strand at 2628.135 kb on + strand at 2628.202 kb on + strand at 2628.283 kb on + strand at 2628.283 kb on + strand at 2628.283 kb on + strand at 2628.568 kb on + strand, within MPMX19_02511 at 2628.568 kb on + strand, within MPMX19_02511 at 2628.751 kb on + strand, within MPMX19_02511 at 2628.955 kb on + strand, within MPMX19_02511 at 2629.030 kb on + strand, within MPMX19_02511
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 2,626,349 - -0.1 2,626,349 - -0.2 2,626,349 - +0.7 2,626,349 - +0.2 2,626,349 - +1.0 2,626,411 + -1.4 2,626,412 - +0.3 2,626,416 + -1.3 2,626,560 + MPMX19_02509 0.23 -2.0 2,626,560 + MPMX19_02509 0.23 -0.2 2,626,560 + MPMX19_02509 0.23 -1.5 2,626,560 + MPMX19_02509 0.23 +0.7 2,626,560 + MPMX19_02509 0.23 -1.6 2,626,560 + MPMX19_02509 0.23 -2.2 2,626,560 + MPMX19_02509 0.23 -1.1 2,626,560 + MPMX19_02509 0.23 -0.3 2,626,560 + MPMX19_02509 0.23 -0.4 2,626,560 + MPMX19_02509 0.23 -0.5 2,626,560 + MPMX19_02509 0.23 -0.7 2,626,561 - MPMX19_02509 0.23 -0.2 2,626,561 - MPMX19_02509 0.23 -1.4 2,626,561 - MPMX19_02509 0.23 -0.8 2,626,561 - MPMX19_02509 0.23 -1.6 2,626,561 - MPMX19_02509 0.23 -0.6 2,626,611 + MPMX19_02509 0.36 +0.6 2,626,611 + MPMX19_02509 0.36 -1.5 2,626,611 + MPMX19_02509 0.36 -1.0 2,626,611 + MPMX19_02509 0.36 +1.2 2,626,611 + MPMX19_02509 0.36 -1.7 2,626,611 + MPMX19_02509 0.36 -1.5 2,626,611 + MPMX19_02509 0.36 -0.1 2,626,611 + MPMX19_02509 0.36 +1.2 2,626,611 + MPMX19_02509 0.36 -1.5 2,626,612 - MPMX19_02509 0.36 -0.7 2,626,612 - MPMX19_02509 0.36 +0.7 2,626,612 - MPMX19_02509 0.36 -0.6 2,626,612 - MPMX19_02509 0.36 -0.0 2,626,612 - MPMX19_02509 0.36 +1.0 2,626,612 - MPMX19_02509 0.36 +0.3 2,626,612 - MPMX19_02509 0.36 -0.8 2,626,764 + MPMX19_02509 0.75 -1.1 2,626,764 + MPMX19_02509 0.75 -0.7 2,626,764 + MPMX19_02509 0.75 +1.7 2,626,764 + MPMX19_02509 0.75 -0.0 2,626,764 + MPMX19_02509 0.75 -1.0 2,626,764 + MPMX19_02509 0.75 -0.7 2,626,764 + MPMX19_02509 0.75 +0.2 2,626,764 + MPMX19_02509 0.75 +0.4 2,626,764 + MPMX19_02509 0.75 +1.2 2,626,764 + MPMX19_02509 0.75 +0.4 2,626,764 + MPMX19_02509 0.75 -1.8 2,626,764 + MPMX19_02509 0.75 +0.7 2,626,764 + MPMX19_02509 0.75 -1.0 2,626,764 + MPMX19_02509 0.75 -0.3 2,626,764 + MPMX19_02509 0.75 +0.3 2,626,764 + MPMX19_02509 0.75 -1.0 2,626,764 + MPMX19_02509 0.75 -1.4 2,626,764 + MPMX19_02509 0.75 +0.1 2,626,764 + MPMX19_02509 0.75 +0.3 2,626,764 + MPMX19_02509 0.75 +1.0 2,626,764 + MPMX19_02509 0.75 -0.6 2,626,764 + MPMX19_02509 0.75 +0.5 2,626,764 + MPMX19_02509 0.75 -0.7 2,626,764 + MPMX19_02509 0.75 +1.3 2,626,764 + MPMX19_02509 0.75 -0.8 2,626,764 + MPMX19_02509 0.75 +0.0 2,626,765 - MPMX19_02509 0.75 -0.8 2,626,765 - MPMX19_02509 0.75 +0.3 2,626,765 - MPMX19_02509 0.75 -0.1 2,626,765 - MPMX19_02509 0.75 -0.1 2,626,765 - MPMX19_02509 0.75 +0.0 2,626,765 - MPMX19_02509 0.75 -0.8 2,626,765 - MPMX19_02509 0.75 +0.5 2,626,765 - MPMX19_02509 0.75 -0.8 2,626,765 - MPMX19_02509 0.75 +2.1 2,626,765 - MPMX19_02509 0.75 +0.4 2,626,765 - MPMX19_02509 0.75 +0.2 2,626,765 - MPMX19_02509 0.75 -0.4 2,626,765 - MPMX19_02509 0.75 +1.0 2,626,765 - MPMX19_02509 0.75 -1.4 2,626,765 - MPMX19_02509 0.75 -2.3 2,626,765 - MPMX19_02509 0.75 -1.1 2,626,765 - MPMX19_02509 0.75 -1.6 2,626,765 - MPMX19_02509 0.75 -0.8 2,626,765 - MPMX19_02509 0.75 -0.2 2,626,765 - MPMX19_02509 0.75 +1.3 2,626,765 - MPMX19_02509 0.75 -1.1 2,626,765 - MPMX19_02509 0.75 -0.8 2,626,765 - MPMX19_02509 0.75 -0.3 2,626,765 - MPMX19_02509 0.75 -2.6 2,626,765 - MPMX19_02509 0.75 -0.6 2,626,857 + -0.6 2,626,857 + -0.1 2,626,857 + -0.7 2,626,857 + -0.5 2,626,857 + +1.5 2,626,857 + -0.2 2,626,857 + -1.4 2,626,857 + -0.5 2,626,857 + -0.8 2,626,857 + -0.5 2,626,857 + +0.6 2,626,857 + +1.3 2,626,857 + +0.4 2,626,857 + +0.4 2,626,857 + +0.9 2,626,857 + +1.2 2,626,857 + -1.7 2,626,857 + -0.6 2,626,857 + -0.5 2,626,857 + +1.0 2,626,857 + -0.6 2,626,858 - +1.5 2,626,858 - +0.9 2,626,858 - +0.4 2,626,858 - -2.4 2,626,858 - +0.4 2,626,858 - -0.3 2,626,858 - -2.5 2,626,858 - +1.5 2,626,858 - +0.7 2,626,858 - -0.3 2,626,858 - -0.4 2,626,858 - -0.3 2,626,858 - -1.3 2,626,858 - -0.6 2,626,858 - +0.2 2,626,858 - +1.7 2,626,858 - +0.2 2,626,858 - -0.6 2,626,858 - +1.3 2,626,858 - -0.8 2,626,858 - -0.6 2,626,858 - -1.3 2,626,858 - +0.4 2,626,858 - -0.0 2,626,858 - -0.3 2,626,858 - -0.4 2,626,858 - -0.4 2,626,858 - -1.1 2,626,858 - -2.2 2,626,916 + +0.6 2,626,989 + -0.4 2,626,989 + -0.8 2,626,989 + -0.7 2,626,989 + -1.4 2,626,989 + +0.1 2,626,989 + +1.1 2,626,989 + +0.5 2,626,989 + +1.4 2,626,989 + -0.5 2,626,989 + -0.8 2,626,989 + -0.5 2,626,989 + -1.1 2,626,989 + -1.3 2,626,989 + -1.4 2,626,990 - +0.5 2,626,990 - -0.4 2,626,990 - -1.4 2,626,990 - -0.8 2,626,990 - -1.0 2,626,990 - -0.4 2,626,990 - +0.2 2,626,990 - -0.4 2,626,990 - -0.9 2,626,990 - -0.1 2,626,990 - +0.4 2,626,990 - +0.4 2,626,990 - -0.6 2,626,990 - +0.5 2,626,990 - -0.0 2,627,056 + -1.3 2,627,058 + -0.7 2,627,058 + -0.5 2,627,058 + -0.3 2,627,058 + -1.1 2,627,058 + +0.3 2,627,059 - -1.1 2,627,059 - -0.1 2,627,059 - -0.1 2,627,059 - +0.6 2,627,059 - -0.0 2,627,115 + +0.2 2,627,115 + +1.3 2,627,115 + +0.5 2,627,115 + +0.2 2,627,115 + +0.8 2,627,115 + -0.6 2,627,115 + -0.8 2,627,115 + -0.6 2,627,115 + -0.8 2,627,115 + -0.7 2,627,115 + -2.3 2,627,115 + -0.6 2,627,115 + +0.2 2,627,115 + +0.4 2,627,115 + -0.1 2,627,116 - +0.7 2,627,116 - +0.7 2,627,116 - +0.5 2,627,116 - +1.7 2,627,116 - +0.4 2,627,116 - -0.8 2,627,117 + +0.2 2,627,117 + -1.6 2,627,117 + +0.2 2,627,117 + +0.6 2,627,117 + +0.7 2,627,117 + +1.0 2,627,117 + +0.9 2,627,117 + -0.5 2,627,117 + -0.7 2,627,117 + +0.0 2,627,117 + -2.1 2,627,117 + -0.5 2,627,117 + -0.7 2,627,117 + +0.3 2,627,117 + -0.4 2,627,117 + +0.2 2,627,117 + -0.7 2,627,117 + +0.2 2,627,117 + -0.2 2,627,117 + -0.3 2,627,117 + -0.4 2,627,117 + -0.3 2,627,117 + -0.9 2,627,117 + -0.3 2,627,117 + +0.7 2,627,117 + +1.2 2,627,117 + +0.3 2,627,117 + +0.3 2,627,117 + -0.4 2,627,118 - -0.8 2,627,118 - -0.6 2,627,118 - -0.6 2,627,118 - -0.3 2,627,118 - -1.4 2,627,118 - +0.4 2,627,118 - +0.9 2,627,118 - +0.7 2,628,088 + -1.3 2,628,088 + -0.1 2,628,088 + -0.1 2,628,088 + -0.3 2,628,089 - -0.9 2,628,089 - +0.2 2,628,089 - -1.1 2,628,089 - +0.2 2,628,089 - -0.4 2,628,089 - -0.5 2,628,135 + -1.1 2,628,135 + -0.1 2,628,135 + -0.3 2,628,135 + -0.9 2,628,202 + +0.7 2,628,283 + +1.3 2,628,283 + -1.1 2,628,283 + +0.6 2,628,568 + MPMX19_02511 0.24 -0.6 2,628,568 + MPMX19_02511 0.24 -0.8 2,628,751 + MPMX19_02511 0.37 +0.2 2,628,955 + MPMX19_02511 0.52 -1.3 2,629,030 + MPMX19_02511 0.57 -1.1
Or see this region's nucleotide sequence