Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02485

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,605,133	+		MPMX19_02484	0.17	+0.2
2,605,133	+		MPMX19_02484	0.17	+0.1
2,605,133	+		MPMX19_02484	0.17	-0.9
2,605,133	+		MPMX19_02484	0.17	-1.3
2,605,133	+		MPMX19_02484	0.17	-0.9
2,605,133	+		MPMX19_02484	0.17	-0.9
2,605,133	+		MPMX19_02484	0.17	+0.1
2,605,937	+				+0.4
2,605,937	+				+0.3
2,605,937	+				+0.5
2,605,937	+				+1.1
2,605,937	+				+0.4
2,605,938	-				-0.1
2,605,965	-				+1.1
2,605,965	-				+0.9
2,606,635	+				-0.3
2,606,635	+				-0.3
2,606,635	+				-1.7
2,606,635	+				-0.1
2,606,645	+				-0.6
2,606,645	+				+1.1
2,606,645	+				-0.9
2,606,645	+				-0.4
2,606,646	-				+0.7
2,606,646	-				+1.0
2,606,646	-				+0.2
2,606,646	-				+0.5
2,606,651	+				-1.9
2,606,651	+				+1.1
2,606,651	+				-1.4
2,606,651	+				+0.7
2,606,651	+				-0.6
2,606,651	+				+0.3
2,606,651	+				-1.0
2,606,651	+				+1.1
2,606,651	+				-0.3
2,606,651	+				-0.5
2,606,651	+				+0.9
2,606,651	+				-0.5
2,606,652	-				+0.1
2,606,652	-				+0.2
2,606,652	-				-1.3
2,606,652	-				+0.6
2,606,720	+				+0.1
2,606,720	+				+0.2
2,606,721	-				-0.0
2,606,721	-				+0.2
2,606,721	-				+0.1
2,606,721	-				+0.1
2,606,721	-				+0.9
2,606,721	-				-0.3
2,606,725	+				-0.4
2,606,725	+				-1.6
2,606,725	+				+0.6
2,606,725	+				-0.7
2,606,726	-				-0.6
2,606,726	-				+0.7
2,606,726	-				-0.3
2,606,726	-				-0.6
2,606,726	-				-0.3
2,606,759	+				+0.7
2,606,759	+				-1.2
2,606,760	-				+0.6
2,606,760	-				+0.1
2,606,760	-				-0.4
2,606,760	-				-0.2
2,606,772	+				-0.3
2,606,772	+				-1.4
2,606,773	-				-1.0
2,606,773	-				+0.4
2,606,773	-				-1.1
2,606,773	-				-0.4
2,606,773	-				-0.5
2,606,885	+		MPMX19_02486	0.21	-0.3
2,606,885	+		MPMX19_02486	0.21	-0.9
2,606,885	+		MPMX19_02486	0.21	-0.5
2,606,885	+		MPMX19_02486	0.21	-0.4
2,606,885	+		MPMX19_02486	0.21	-2.4
2,606,886	-		MPMX19_02486	0.22	+0.9
2,606,886	-		MPMX19_02486	0.22	+0.5
2,606,886	-		MPMX19_02486	0.22	-0.9
2,606,886	-		MPMX19_02486	0.22	-1.1
2,606,960	-		MPMX19_02486	0.42	-0.7
2,607,170	+				+0.7
2,607,170	+				-0.4
2,607,170	+				+0.6
2,607,171	-				-0.5
2,607,268	+				-1.2
2,607,268	+				-0.7
2,607,268	+				-0.6
2,607,268	+				+0.1
2,607,268	+				+0.4
2,607,268	+				+1.7
2,607,268	+				-0.7
2,607,268	+				+0.2
2,607,268	+				-0.4
2,607,268	+				-0.2
2,607,268	+				+0.1
2,607,268	+				+0.2
2,607,268	+				+0.4
2,607,268	+				+0.1
2,607,268	+				-0.6
2,607,268	+				-0.7
2,607,268	+				+0.6
2,607,268	+				+0.9
2,607,268	+				+0.9
2,607,268	+				-0.1
2,607,269	-				+0.4
2,607,269	-				+0.1
2,607,269	-				+1.5
2,607,269	-				+0.5
2,607,269	-				-1.3
2,607,269	-				+0.1
2,607,269	-				+0.7
2,607,269	-				+0.9
2,607,269	-				-0.7
2,607,269	-				-1.6
2,607,269	-				-0.1
2,607,274	+				+0.1
2,607,274	+				+0.4
2,607,274	+				+0.5
2,607,274	+				-0.1
2,607,274	+				+0.1
2,607,274	+				+0.7
2,607,274	+				-0.9
2,607,274	+				+0.3
2,607,275	-				-1.6
2,607,275	-				-0.4
2,607,275	-				-0.4
2,607,275	-				-0.3
2,607,275	-				-0.2
2,607,275	-				-0.6
2,607,275	-				+0.5
2,607,275	-				-1.0
2,607,301	+		MPMX19_02487	0.13	+0.1
2,607,301	+		MPMX19_02487	0.13	-2.4
2,607,301	+		MPMX19_02487	0.13	-0.8
2,607,301	+		MPMX19_02487	0.13	+0.0
2,607,301	+		MPMX19_02487	0.13	+0.4
2,607,301	+		MPMX19_02487	0.13	+0.4
2,607,301	+		MPMX19_02487	0.13	-0.4
2,607,301	+		MPMX19_02487	0.13	-0.3
2,607,301	+		MPMX19_02487	0.13	-1.4
2,607,302	-		MPMX19_02487	0.13	+0.0
2,607,302	-		MPMX19_02487	0.13	+1.9
2,607,302	-		MPMX19_02487	0.13	+0.8
2,607,302	-		MPMX19_02487	0.13	-0.9
2,607,302	-		MPMX19_02487	0.13	-1.3
2,607,435	-		MPMX19_02487	0.28	-0.9
2,607,587	-		MPMX19_02487	0.46	+0.4