Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02484

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,603,978	+				-0.4
2,603,978	+				-0.3
2,603,978	+				-1.1
2,603,978	+				-1.1
2,603,978	+				+0.4
2,603,978	+				-0.3
2,603,979	-				+0.4
2,603,979	-				+1.0
2,603,979	-				-0.1
2,603,979	-				+0.3
2,603,979	-				+0.0
2,603,979	-				-0.7
2,603,979	-				-1.4
2,604,083	+				-1.4
2,604,083	+				+0.3
2,604,083	+				+0.5
2,604,083	+				-0.0
2,604,084	-				-1.3
2,604,084	-				-1.6
2,604,084	-				+1.4
2,604,084	-				+0.1
2,604,084	-				+0.1
2,604,084	-				-0.4
2,604,306	+		MPMX19_02483	0.35	-0.1
2,604,306	+		MPMX19_02483	0.35	-0.7
2,604,306	+		MPMX19_02483	0.35	-1.8
2,604,306	+		MPMX19_02483	0.35	+0.7
2,604,306	+		MPMX19_02483	0.35	-0.5
2,604,306	+		MPMX19_02483	0.35	-1.5
2,604,307	-		MPMX19_02483	0.35	-1.1
2,604,317	+		MPMX19_02483	0.37	+1.7
2,604,317	+		MPMX19_02483	0.37	+1.1
2,604,317	+		MPMX19_02483	0.37	+0.3
2,604,317	+		MPMX19_02483	0.37	+0.7
2,604,317	+		MPMX19_02483	0.37	-0.3
2,604,317	+		MPMX19_02483	0.37	-1.0
2,604,317	+		MPMX19_02483	0.37	-1.4
2,604,317	+		MPMX19_02483	0.37	-0.9
2,604,317	+		MPMX19_02483	0.37	-0.0
2,604,317	+		MPMX19_02483	0.37	-1.7
2,604,317	+		MPMX19_02483	0.37	-0.4
2,604,317	+		MPMX19_02483	0.37	-0.3
2,604,317	+		MPMX19_02483	0.37	-0.3
2,604,318	-		MPMX19_02483	0.37	-1.2
2,604,318	-		MPMX19_02483	0.37	-1.4
2,604,318	-		MPMX19_02483	0.37	+0.4
2,604,318	-		MPMX19_02483	0.37	-0.9
2,604,318	-		MPMX19_02483	0.37	-0.9
2,604,318	-		MPMX19_02483	0.37	+0.7
2,604,318	-		MPMX19_02483	0.37	+0.1
2,604,318	-		MPMX19_02483	0.37	+1.0
2,604,318	-		MPMX19_02483	0.37	-0.6
2,604,318	-		MPMX19_02483	0.37	-0.1
2,604,318	-		MPMX19_02483	0.37	-0.4
2,604,318	-		MPMX19_02483	0.37	+0.4
2,604,318	-		MPMX19_02483	0.37	+0.9
2,604,318	-		MPMX19_02483	0.37	+0.2
2,604,407	+		MPMX19_02483	0.49	+0.2
2,604,407	+		MPMX19_02483	0.49	-1.7
2,604,407	+		MPMX19_02483	0.49	+1.2
2,604,407	+		MPMX19_02483	0.49	+1.3
2,604,407	+		MPMX19_02483	0.49	+0.7
2,604,407	+		MPMX19_02483	0.49	-0.4
2,604,407	+		MPMX19_02483	0.49	+1.2
2,604,407	+		MPMX19_02483	0.49	-0.5
2,604,407	+		MPMX19_02483	0.49	-1.1
2,604,407	+		MPMX19_02483	0.49	+0.6
2,604,407	+		MPMX19_02483	0.49	-1.9
2,604,407	+		MPMX19_02483	0.49	+1.0
2,604,407	+		MPMX19_02483	0.49	-1.4
2,604,407	+		MPMX19_02483	0.49	+1.1
2,604,407	+		MPMX19_02483	0.49	+0.5
2,604,407	+		MPMX19_02483	0.49	-0.9
2,604,407	+		MPMX19_02483	0.49	+0.5
2,604,407	+		MPMX19_02483	0.49	-1.4
2,604,407	+		MPMX19_02483	0.49	-0.8
2,604,407	+		MPMX19_02483	0.49	-1.4
2,604,408	-		MPMX19_02483	0.49	-0.4
2,604,408	-		MPMX19_02483	0.49	+1.1
2,604,408	-		MPMX19_02483	0.49	-0.6
2,604,408	-		MPMX19_02483	0.49	-0.7
2,604,408	-		MPMX19_02483	0.49	-1.9
2,604,408	-		MPMX19_02483	0.49	-0.9
2,604,408	-		MPMX19_02483	0.49	-1.6
2,604,408	-		MPMX19_02483	0.49	-1.6
2,604,408	-		MPMX19_02483	0.49	+0.5
2,604,408	-		MPMX19_02483	0.49	+0.2
2,604,408	-		MPMX19_02483	0.49	+0.0
2,604,408	-		MPMX19_02483	0.49	+1.2
2,604,408	-		MPMX19_02483	0.49	-0.7
2,604,408	-		MPMX19_02483	0.49	-0.3
2,604,408	-		MPMX19_02483	0.49	-0.4
2,604,408	-		MPMX19_02483	0.49	-0.0
2,604,408	-		MPMX19_02483	0.49	+0.1
2,604,416	+		MPMX19_02483	0.50	+0.1
2,604,416	+		MPMX19_02483	0.50	-1.1
2,604,416	+		MPMX19_02483	0.50	+0.1
2,604,416	+		MPMX19_02483	0.50	+0.1
2,604,416	+		MPMX19_02483	0.50	-0.3
2,604,416	+		MPMX19_02483	0.50	-0.5
2,604,416	+		MPMX19_02483	0.50	+0.6
2,604,416	+		MPMX19_02483	0.50	+0.7
2,604,416	+		MPMX19_02483	0.50	-0.4
2,604,416	+		MPMX19_02483	0.50	+0.4
2,604,416	+		MPMX19_02483	0.50	-1.9
2,604,416	+		MPMX19_02483	0.50	-1.1
2,604,416	+		MPMX19_02483	0.50	-0.5
2,604,416	+		MPMX19_02483	0.50	-0.4
2,604,417	-		MPMX19_02483	0.50	-0.9
2,604,417	-		MPMX19_02483	0.50	+1.1
2,604,417	-		MPMX19_02483	0.50	-0.1
2,604,417	-		MPMX19_02483	0.50	-1.7
2,604,417	-		MPMX19_02483	0.50	-1.2
2,604,417	-		MPMX19_02483	0.50	-0.0
2,604,417	-		MPMX19_02483	0.50	-1.4
2,604,417	-		MPMX19_02483	0.50	-1.1
2,604,417	-		MPMX19_02483	0.50	-0.4
2,604,417	-		MPMX19_02483	0.50	-0.9
2,604,417	-		MPMX19_02483	0.50	-0.2
2,604,417	-		MPMX19_02483	0.50	+0.1
2,604,417	-		MPMX19_02483	0.50	+0.1
2,604,417	-		MPMX19_02483	0.50	-1.3
2,604,417	-		MPMX19_02483	0.50	-0.4
2,604,417	-		MPMX19_02483	0.50	+1.4
2,604,417	-		MPMX19_02483	0.50	-0.4
2,604,417	-		MPMX19_02483	0.50	-0.6
2,604,417	-		MPMX19_02483	0.50	+0.4
2,604,521	+		MPMX19_02483	0.64	-1.0
2,604,521	+		MPMX19_02483	0.64	-1.7
2,604,521	+		MPMX19_02483	0.64	+0.2
2,604,521	+		MPMX19_02483	0.64	-0.3
2,604,521	+		MPMX19_02483	0.64	-0.3
2,604,521	+		MPMX19_02483	0.64	-0.4
2,604,521	+		MPMX19_02483	0.64	-0.5
2,604,521	+		MPMX19_02483	0.64	-1.2
2,604,521	+		MPMX19_02483	0.64	-0.4
2,604,521	+		MPMX19_02483	0.64	+0.1
2,604,521	+		MPMX19_02483	0.64	+1.0
2,604,522	-		MPMX19_02483	0.64	+0.4
2,604,522	-		MPMX19_02483	0.64	-0.1
2,604,522	-		MPMX19_02483	0.64	-0.9
2,604,522	-		MPMX19_02483	0.64	-1.9
2,604,522	-		MPMX19_02483	0.64	-1.3
2,604,522	-		MPMX19_02483	0.64	+0.1
2,604,522	-		MPMX19_02483	0.64	-2.3
2,604,522	-		MPMX19_02483	0.64	+0.3
2,604,522	-		MPMX19_02483	0.64	-0.6
2,604,522	-		MPMX19_02483	0.64	-0.6
2,604,575	+		MPMX19_02483	0.71	-0.2
2,604,575	+		MPMX19_02483	0.71	+0.4
2,604,575	+		MPMX19_02483	0.71	+0.9
2,604,575	+		MPMX19_02483	0.71	+0.4
2,604,575	+		MPMX19_02483	0.71	-1.2
2,604,575	+		MPMX19_02483	0.71	+0.0
2,604,575	+		MPMX19_02483	0.71	-0.6
2,604,575	+		MPMX19_02483	0.71	-0.1
2,604,575	+		MPMX19_02483	0.71	+0.4
2,604,575	+		MPMX19_02483	0.71	-0.5
2,604,576	-		MPMX19_02483	0.71	+0.9
2,604,576	-		MPMX19_02483	0.71	+1.1
2,604,576	-		MPMX19_02483	0.71	-0.3
2,604,576	-		MPMX19_02483	0.71	+0.3
2,604,576	-		MPMX19_02483	0.71	-1.1
2,604,576	-		MPMX19_02483	0.71	-1.1
2,604,576	-		MPMX19_02483	0.71	+0.6
2,604,576	-		MPMX19_02483	0.71	-0.8
2,604,576	-		MPMX19_02483	0.71	-1.3
2,604,576	-		MPMX19_02483	0.71	-0.3
2,604,576	-		MPMX19_02483	0.71	-0.4
2,604,576	-		MPMX19_02483	0.71	+1.3
2,604,576	-		MPMX19_02483	0.71	+0.2
2,604,581	+		MPMX19_02483	0.72	-0.8
2,604,581	+		MPMX19_02483	0.72	+0.3
2,604,581	+		MPMX19_02483	0.72	+1.1
2,604,582	-		MPMX19_02483	0.72	+0.5
2,604,731	+				-1.3
2,604,731	+				-0.3
2,604,731	+				-0.1
2,604,731	+				+0.3
2,604,731	+				-0.5
2,604,731	+				-0.8
2,604,731	+				-0.4
2,604,731	+				-0.0
2,604,731	+				+0.0
2,604,731	+				+0.7
2,604,731	+				-0.8
2,604,731	+				-0.2
2,604,731	+				-0.7
2,604,731	+				-0.4
2,604,731	+				+0.9
2,604,732	-				+0.5
2,604,732	-				+0.4
2,604,732	-				-0.1
2,604,732	-				-0.7
2,604,732	-				-0.6
2,604,732	-				+1.1
2,604,764	+				-0.1
2,604,765	-				-0.4
2,604,765	-				+0.5
2,604,788	+				+0.1
2,604,788	+				+1.0
2,604,788	+				-0.4
2,604,788	+				-0.6
2,604,788	+				+0.4
2,604,788	+				-0.0
2,604,788	+				-1.0
2,604,789	-				-1.4
2,604,789	-				-0.3
2,604,789	-				+0.2
2,604,789	-				-0.1
2,604,886	+				-0.6
2,604,886	+				-0.5
2,604,886	+				-0.6
2,605,016	+				-0.4
2,605,016	+				-1.4
2,605,016	+				-0.9
2,605,016	+				-0.4
2,605,016	+				-1.4
2,605,016	+				-1.1
2,605,016	+				-0.9
2,605,016	+				-0.0
2,605,016	+				+0.1
2,605,016	+				-0.5
2,605,016	+				-1.7
2,605,016	+				-1.0
2,605,016	+				-0.3
2,605,016	+				-0.9
2,605,016	+				-0.6
2,605,016	+				-0.3
2,605,016	+				+1.5
2,605,016	+				+0.3
2,605,016	+				+0.7
2,605,016	+				-0.3
2,605,016	+				-1.7
2,605,016	+				-0.0
2,605,016	+				+0.1
2,605,016	+				+0.0
2,605,016	+				-2.1
2,605,133	+		MPMX19_02484	0.17	+0.2
2,605,133	+		MPMX19_02484	0.17	+0.1
2,605,133	+		MPMX19_02484	0.17	-0.9
2,605,133	+		MPMX19_02484	0.17	-1.3
2,605,133	+		MPMX19_02484	0.17	-0.9
2,605,133	+		MPMX19_02484	0.17	-0.9
2,605,133	+		MPMX19_02484	0.17	+0.1
2,605,937	+				+0.4
2,605,937	+				+0.3
2,605,937	+				+0.5
2,605,937	+				+1.1
2,605,937	+				+0.4
2,605,938	-				-0.1
2,605,965	-				+1.1
2,605,965	-				+0.9
2,606,635	+				-0.3
2,606,635	+				-0.3
2,606,635	+				-1.7
2,606,635	+				-0.1
2,606,645	+				-0.6
2,606,645	+				+1.1
2,606,645	+				-0.9
2,606,645	+				-0.4
2,606,646	-				+0.7
2,606,646	-				+1.0
2,606,646	-				+0.2
2,606,646	-				+0.5
2,606,651	+				-1.9
2,606,651	+				+1.1
2,606,651	+				-1.4
2,606,651	+				+0.7
2,606,651	+				-0.6
2,606,651	+				+0.3
2,606,651	+				-1.0
2,606,651	+				+1.1
2,606,651	+				-0.3
2,606,651	+				-0.5
2,606,651	+				+0.9
2,606,651	+				-0.5
2,606,652	-				+0.1
2,606,652	-				+0.2
2,606,652	-				-1.3
2,606,652	-				+0.6
2,606,720	+				+0.1
2,606,720	+				+0.2
2,606,721	-				-0.0
2,606,721	-				+0.2
2,606,721	-				+0.1
2,606,721	-				+0.1
2,606,721	-				+0.9
2,606,721	-				-0.3
2,606,725	+				-0.4
2,606,725	+				-1.6
2,606,725	+				+0.6
2,606,725	+				-0.7
2,606,726	-				-0.6
2,606,726	-				+0.7
2,606,726	-				-0.3
2,606,726	-				-0.6
2,606,726	-				-0.3
2,606,759	+				+0.7
2,606,759	+				-1.2
2,606,760	-				+0.6
2,606,760	-				+0.1
2,606,760	-				-0.4
2,606,760	-				-0.2
2,606,772	+				-0.3
2,606,772	+				-1.4
2,606,773	-				-1.0
2,606,773	-				+0.4
2,606,773	-				-1.1
2,606,773	-				-0.4
2,606,773	-				-0.5
2,606,885	+		MPMX19_02486	0.21	-0.3
2,606,885	+		MPMX19_02486	0.21	-0.9
2,606,885	+		MPMX19_02486	0.21	-0.5
2,606,885	+		MPMX19_02486	0.21	-0.4
2,606,885	+		MPMX19_02486	0.21	-2.4
2,606,886	-		MPMX19_02486	0.22	+0.9
2,606,886	-		MPMX19_02486	0.22	+0.5
2,606,886	-		MPMX19_02486	0.22	-0.9
2,606,886	-		MPMX19_02486	0.22	-1.1
2,606,960	-		MPMX19_02486	0.42	-0.7