Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02322

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,441,601	+				+0.2
2,441,601	+				-0.4
2,441,601	+				-0.7
2,441,601	+				+0.5
2,441,601	+				-0.1
2,441,601	+				-0.6
2,441,601	+				+0.8
2,441,601	+				-1.9
2,441,601	+				-0.7
2,441,648	+				+0.7
2,441,648	+				-1.0
2,441,648	+				-0.8
2,441,648	+				-1.6
2,441,648	+				-0.3
2,441,648	+				-0.4
2,441,648	+				-0.2
2,441,648	+				-1.3
2,442,082	+				-1.3
2,442,082	+				+0.7
2,442,082	+				-0.5
2,442,082	+				+0.4
2,442,082	+				-0.1
2,442,082	+				+0.3
2,442,082	+				-1.6
2,442,082	+				-1.5
2,442,082	+				-0.3
2,442,082	+				-0.2
2,442,082	+				-0.2
2,442,082	+				+0.3
2,442,082	+				+0.4
2,442,082	+				+0.4
2,442,082	+				-0.7
2,442,082	+				-0.9
2,442,082	+				+0.1
2,442,082	+				-1.3
2,442,083	-				-0.6
2,442,083	-				-0.0
2,442,083	-				+0.2
2,442,083	-				+0.9
2,442,083	-				+0.7
2,442,083	-				-0.6
2,442,083	-				-0.5
2,442,083	-				-0.6
2,442,083	-				+0.1
2,442,083	-				-1.4
2,442,083	-				-0.1
2,442,083	-				-2.3
2,442,083	-				+0.9
2,442,083	-				-0.6
2,442,083	-				-0.7
2,442,083	-				-1.9
2,442,083	-				-1.3
2,442,083	-				-0.7
2,442,083	-				-1.9
2,442,083	-				-0.2
2,442,083	-				+0.4
2,442,083	-				-1.3
2,442,083	-				+0.1
2,442,083	-				+0.1
2,442,110	+				+0.1
2,442,111	-				-1.2
2,442,161	+				+2.4
2,442,161	+				+0.4
2,442,161	+				+0.9
2,442,162	-				-0.1
2,442,233	+				-0.6
2,442,233	+				-0.5
2,442,233	+				+0.8
2,442,233	+				+1.1
2,442,253	+				-0.3
2,442,253	+				-0.4
2,442,255	+				+1.0
2,442,255	+				-1.3
2,442,255	+				+0.3
2,442,361	+				-1.1
2,442,969	+				+2.2
2,442,969	+				-0.9
2,442,969	+				-0.4
2,442,969	+				+0.5
2,442,969	+				+0.1
2,442,969	+				-1.1
2,442,969	+				-0.9
2,442,970	-				-1.1
2,442,970	-				-0.5
2,442,970	-				-1.2
2,442,970	-				-1.1
2,442,970	-				-1.0
2,442,970	-				-0.5
2,442,970	-				-1.2
2,442,970	-				-1.1
2,442,971	+				-2.4
2,442,971	+				-0.3
2,442,971	+				+0.5
2,442,971	+				-0.7
2,442,971	+				-0.1
2,442,971	+				-3.5
2,442,971	+				+0.7
2,442,971	+				-1.6
2,442,971	+				-0.4
2,442,971	+				-0.1
2,442,971	+				+0.0
2,442,971	+				-0.4
2,442,971	+				-1.2
2,442,971	+				-1.6
2,442,971	+				-0.2
2,442,971	+				-2.2
2,442,971	+				-0.8
2,442,971	+				-0.3
2,442,971	+				-1.1
2,442,971	+				-1.5
2,442,971	+				-0.9
2,442,971	+				-0.7
2,442,971	+				+0.4
2,442,971	+				-1.2
2,442,971	+				-0.2
2,442,971	+				-0.1
2,442,971	+				-0.8
2,442,971	+				-1.3
2,442,971	+				-0.0
2,442,971	+				-1.1
2,442,971	+				+0.4
2,442,972	-				+0.5
2,442,972	-				+0.5
2,442,972	-				+0.1
2,442,972	-				-1.5
2,442,972	-				+0.7
2,442,972	-				-1.9
2,442,972	-				-0.3
2,442,972	-				-2.6
2,442,972	-				-0.9
2,442,972	-				-1.2
2,442,972	-				-0.7
2,442,972	-				-1.5
2,442,972	-				+0.1
2,442,972	-				+0.4
2,442,972	-				+0.5
2,442,972	-				+0.1
2,442,972	-				-0.6
2,442,972	-				-0.2
2,442,972	-				-1.9
2,442,972	-				+1.3
2,442,972	-				+2.3
2,442,972	-				-0.6
2,442,972	-				-1.1
2,442,972	-				+0.4
2,442,972	-				+0.3
2,442,972	-				-0.4
2,442,972	-				-0.3
2,442,972	-				+0.6
2,442,972	-				+1.7
2,442,972	-				+1.0
2,442,972	-				-0.9
2,443,003	+				+0.6
2,443,003	+				-0.7
2,443,003	+				-0.7
2,443,003	+				-1.0
2,443,004	-				+0.4
2,443,004	-				-1.5
2,443,004	-				+0.1
2,443,004	-				-0.7
2,443,004	-				+0.7
2,443,004	-				-0.3
2,443,004	-				-0.7
2,443,004	-				-0.0
2,443,061	+				+1.2
2,443,061	+				-0.3
2,443,062	-				+0.7
2,443,062	-				-0.1
2,443,062	-				-0.5
2,443,355	+		MPMX19_02323	0.23	+0.6
2,443,355	+		MPMX19_02323	0.23	+0.9
2,443,355	+		MPMX19_02323	0.23	-0.5
2,443,355	+		MPMX19_02323	0.23	+0.5
2,443,355	+		MPMX19_02323	0.23	-0.9
2,443,356	-		MPMX19_02323	0.23	-1.1
2,443,356	-		MPMX19_02323	0.23	-0.4
2,443,356	-		MPMX19_02323	0.23	-0.4
2,443,356	-		MPMX19_02323	0.23	-1.6
2,443,356	-		MPMX19_02323	0.23	-2.1
2,443,356	-		MPMX19_02323	0.23	-0.1
2,443,356	-		MPMX19_02323	0.23	+0.6
2,443,356	-		MPMX19_02323	0.23	-0.2
2,443,356	-		MPMX19_02323	0.23	-2.0
2,443,356	-		MPMX19_02323	0.23	-0.2
2,443,356	-		MPMX19_02323	0.23	-1.0
2,443,469	+		MPMX19_02323	0.34	-1.7
2,443,469	+		MPMX19_02323	0.34	-0.1
2,443,469	+		MPMX19_02323	0.34	-0.7
2,443,470	-		MPMX19_02323	0.34	+0.6
2,443,470	-		MPMX19_02323	0.34	+0.5
2,443,470	-		MPMX19_02323	0.34	+0.7
2,443,470	-		MPMX19_02323	0.34	-0.2
2,443,589	+		MPMX19_02323	0.46	-0.1
2,443,589	+		MPMX19_02323	0.46	+0.6
2,443,590	-		MPMX19_02323	0.46	+0.4
2,443,590	-		MPMX19_02323	0.46	+0.1
2,443,590	-		MPMX19_02323	0.46	+0.1
2,443,590	-		MPMX19_02323	0.46	+0.4
2,443,590	-		MPMX19_02323	0.46	-0.1
2,443,590	-		MPMX19_02323	0.46	-1.5
2,443,730	+		MPMX19_02323	0.60	-2.1
2,443,730	+		MPMX19_02323	0.60	+0.2
2,443,730	+		MPMX19_02323	0.60	-0.2
2,443,730	+		MPMX19_02323	0.60	+1.1
2,443,730	+		MPMX19_02323	0.60	-0.5
2,443,730	+		MPMX19_02323	0.60	+1.1
2,443,731	-		MPMX19_02323	0.60	-0.3
2,443,731	-		MPMX19_02323	0.60	+2.7
2,443,731	-		MPMX19_02323	0.60	-0.4
2,443,731	-		MPMX19_02323	0.60	-1.1
2,443,731	-		MPMX19_02323	0.60	+0.3
2,443,731	-		MPMX19_02323	0.60	-0.9