Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02220

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,326,134	+		MPMX19_02219	0.87	-1.0
2,326,134	+		MPMX19_02219	0.87	+0.2
2,326,134	+		MPMX19_02219	0.87	+0.2
2,326,135	-		MPMX19_02219	0.87	-0.8
2,326,135	-		MPMX19_02219	0.87	-0.4
2,326,135	-		MPMX19_02219	0.87	-0.7
2,326,135	-		MPMX19_02219	0.87	-0.0
2,326,284	+				+2.2
2,326,284	+				-1.1
2,326,284	+				+1.2
2,326,284	+				+0.6
2,326,284	+				-0.8
2,326,284	+				+0.8
2,326,284	+				-0.0
2,326,284	+				+0.1
2,326,284	+				-0.7
2,326,284	+				-2.0
2,326,284	+				-0.6
2,326,284	+				+0.7
2,326,284	+				+0.8
2,326,284	+				+0.7
2,326,284	+				+1.0
2,326,284	+				-0.0
2,326,284	+				-0.4
2,326,284	+				-0.5
2,326,284	+				-0.4
2,326,284	+				+0.7
2,326,284	+				+1.0
2,326,284	+				-0.8
2,326,284	+				-0.4
2,326,285	-				-1.2
2,326,285	-				+0.7
2,326,285	-				+0.5
2,326,285	-				+0.4
2,326,285	-				-1.8
2,326,285	-				-1.5
2,326,285	-				-0.0
2,326,285	-				+0.5
2,326,285	-				+2.2
2,326,285	-				-1.0
2,326,285	-				-1.3
2,326,285	-				+0.6
2,326,285	-				-0.4
2,326,285	-				-0.3
2,326,285	-				-1.4
2,326,285	-				+0.1
2,326,285	-				-0.4
2,326,285	-				-1.0
2,326,285	-				-0.3
2,326,285	-				+0.1
2,326,287	+				+0.2
2,326,287	+				+0.1
2,326,287	+				+0.9
2,326,287	+				-0.0
2,326,287	+				+1.1
2,326,287	+				+0.7
2,326,287	+				+0.4
2,326,287	+				-0.1
2,326,288	-				-0.7
2,326,288	-				+0.3
2,326,288	-				-1.1
2,326,288	-				-1.5
2,326,288	-				-2.3
2,326,288	-				-0.7
2,326,288	-				+0.7
2,326,288	-				+0.8
2,326,365	+				+0.7
2,326,365	+				+0.2
2,326,365	+				-0.1
2,326,365	+				+0.4
2,326,365	+				-0.3
2,326,365	+				+0.5
2,326,365	+				-0.1
2,326,365	+				-0.5
2,326,365	+				+0.7
2,326,366	-				-0.3
2,326,366	-				-0.5
2,326,366	-				-1.5
2,326,366	-				+0.8
2,326,366	-				-0.2
2,326,366	-				+1.0
2,326,366	-				-0.5
2,326,366	-				+0.6
2,326,377	+				+0.2
2,326,377	+				-1.0
2,326,377	+				-0.8
2,326,377	+				+0.2
2,326,377	+				-1.6
2,326,377	+				-1.1
2,326,377	+				-0.4
2,326,377	+				-0.6
2,326,377	+				-0.4
2,326,377	+				-0.6
2,326,377	+				+0.8
2,326,377	+				-1.1
2,326,377	+				-0.7
2,326,377	+				+1.1
2,326,377	+				-1.7
2,326,378	-				-0.6
2,326,378	-				+0.1
2,326,378	-				-1.3
2,326,378	-				+1.5
2,326,490	+				-0.2
2,326,490	+				-0.0
2,326,491	-				+1.5
2,326,590	+				+0.9
2,326,684	-				-1.0
2,326,742	+				+0.2
2,326,743	-				+0.2
2,326,828	+				+0.4
2,327,020	+				+0.0
2,327,020	+				-0.0
2,327,020	+				+0.7
2,327,020	+				+0.1
2,327,020	+				+0.4
2,327,020	+				+0.9
2,327,020	+				-0.3
2,327,020	+				+0.1
2,327,020	+				-0.2
2,327,020	+				+1.7
2,327,020	+				-1.3
2,327,020	+				+0.4
2,327,021	-				+0.1
2,327,021	-				-0.5
2,327,021	-				-0.3
2,327,021	-				-2.4
2,327,021	-				-0.0
2,327,021	-				+0.1
2,327,021	-				+1.0
2,327,021	-				-1.8
2,327,021	-				-0.6
2,327,021	-				+0.1
2,327,021	-				+0.2
2,327,022	+				+0.4
2,327,022	+				+0.0
2,327,022	+				-1.9
2,327,022	+				+2.2
2,327,022	+				+1.0
2,327,022	+				-1.1
2,327,022	+				-0.7
2,327,023	-				-1.6
2,327,023	-				+0.3
2,327,023	-				-2.3
2,327,023	-				-0.3
2,327,023	-				-0.6
2,327,023	-				+0.3
2,327,023	-				-1.7
2,327,023	-				-0.3
2,327,023	-				-0.9
2,327,023	-				-0.0
2,327,023	-				-1.1
2,327,239	+		MPMX19_02220	0.24	-0.9
2,327,239	+		MPMX19_02220	0.24	-0.7
2,327,239	+		MPMX19_02220	0.24	+1.1
2,327,239	+		MPMX19_02220	0.24	-0.2
2,327,239	+		MPMX19_02220	0.24	-1.9
2,327,240	-		MPMX19_02220	0.24	-0.1
2,327,240	-		MPMX19_02220	0.24	+1.0
2,327,240	-		MPMX19_02220	0.24	-0.8
2,327,605	+		MPMX19_02220	0.57	-1.5
2,327,605	+		MPMX19_02220	0.57	+0.9
2,327,605	+		MPMX19_02220	0.57	+0.1
2,327,605	+		MPMX19_02220	0.57	-1.1
2,327,605	+		MPMX19_02220	0.57	-3.0
2,327,605	+		MPMX19_02220	0.57	-0.9
2,327,606	-		MPMX19_02220	0.57	+0.5
2,327,606	-		MPMX19_02220	0.57	+0.1
2,327,606	-		MPMX19_02220	0.57	-2.5
2,328,010	+				+0.0
2,328,010	+				-0.9
2,328,010	+				-0.0
2,328,010	+				-0.1
2,328,010	+				-1.6
2,328,010	+				-0.6
2,328,011	-				-1.0
2,328,011	-				-0.3
2,328,011	-				-0.0
2,328,011	-				-0.6
2,328,011	-				+0.0
2,328,011	-				+0.1
2,328,011	-				-1.3
2,328,011	-				+0.8
2,328,011	-				-0.8
2,328,091	+				-0.2
2,328,092	-				-0.8
2,328,092	-				-0.5
2,328,128	+				+1.4
2,328,128	+				-1.3
2,328,128	+				+0.5
2,328,129	-				-0.3
2,328,129	-				-0.6
2,328,515	+		MPMX19_02221	0.61	+0.0
2,328,515	+		MPMX19_02221	0.61	-0.5
2,328,515	+		MPMX19_02221	0.61	-1.6
2,328,515	+		MPMX19_02221	0.61	-0.3
2,328,515	+		MPMX19_02221	0.61	-0.8
2,328,515	+		MPMX19_02221	0.61	-1.4
2,328,515	+		MPMX19_02221	0.61	-0.1
2,328,515	+		MPMX19_02221	0.61	-0.9
2,328,515	+		MPMX19_02221	0.61	-1.1
2,328,515	+		MPMX19_02221	0.61	-2.1
2,328,516	-		MPMX19_02221	0.61	-0.4
2,328,516	-		MPMX19_02221	0.61	-0.3
2,328,516	-		MPMX19_02221	0.61	+0.4
2,328,516	-		MPMX19_02221	0.61	+1.2
2,328,516	-		MPMX19_02221	0.61	-1.0
2,328,516	-		MPMX19_02221	0.61	-1.9
2,328,516	-		MPMX19_02221	0.61	-0.6
2,328,516	-		MPMX19_02221	0.61	-2.6
2,328,516	-		MPMX19_02221	0.61	+0.2
2,328,516	-		MPMX19_02221	0.61	+0.7
2,328,516	-		MPMX19_02221	0.61	+0.1
2,328,516	-		MPMX19_02221	0.61	-2.0
2,328,516	-		MPMX19_02221	0.61	+0.2
2,328,516	-		MPMX19_02221	0.61	-0.7
2,328,516	-		MPMX19_02221	0.61	-0.3
2,328,516	-		MPMX19_02221	0.61	-1.2
2,328,652	+		MPMX19_02221	0.86	-0.7
2,328,652	+		MPMX19_02221	0.86	-0.0
2,328,652	+		MPMX19_02221	0.86	+0.4
2,328,653	-		MPMX19_02221	0.86	-1.5
2,328,653	-		MPMX19_02221	0.86	+0.4
2,328,653	-		MPMX19_02221	0.86	-0.9
2,328,653	-		MPMX19_02221	0.86	+0.0
2,328,653	-		MPMX19_02221	0.86	+0.7
2,328,653	-		MPMX19_02221	0.86	-0.2
2,328,753	+				-0.2
2,328,754	-				+0.5
2,328,773	+				-2.0
2,328,774	-				-1.3