Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02207

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,308,659	+		MPMX19_02206	0.10	-2.0
2,308,660	-		MPMX19_02206	0.10	-1.0
2,308,660	-		MPMX19_02206	0.10	+1.0
2,308,660	-		MPMX19_02206	0.10	-0.6
2,308,660	-		MPMX19_02206	0.10	-0.6
2,308,660	-		MPMX19_02206	0.10	+0.9
2,308,660	-		MPMX19_02206	0.10	-0.3
2,308,660	-		MPMX19_02206	0.10	-0.1
2,308,660	-		MPMX19_02206	0.10	-0.6
2,308,660	-		MPMX19_02206	0.10	+0.5
2,308,815	+		MPMX19_02206	0.28	-0.4
2,308,815	+		MPMX19_02206	0.28	-0.2
2,308,815	+		MPMX19_02206	0.28	+1.5
2,308,815	+		MPMX19_02206	0.28	+2.3
2,308,815	+		MPMX19_02206	0.28	+0.3
2,308,815	+		MPMX19_02206	0.28	-0.1
2,308,815	+		MPMX19_02206	0.28	-1.2
2,308,815	+		MPMX19_02206	0.28	+0.5
2,308,815	+		MPMX19_02206	0.28	-0.1
2,308,815	+		MPMX19_02206	0.28	-0.6
2,308,816	-		MPMX19_02206	0.28	+0.5
2,308,816	-		MPMX19_02206	0.28	+0.4
2,308,816	-		MPMX19_02206	0.28	-0.5
2,308,816	-		MPMX19_02206	0.28	-2.1
2,308,816	-		MPMX19_02206	0.28	+0.5
2,308,816	-		MPMX19_02206	0.28	-0.5
2,308,816	-		MPMX19_02206	0.28	+0.1
2,308,816	-		MPMX19_02206	0.28	-1.6
2,308,816	-		MPMX19_02206	0.28	-1.3
2,308,816	-		MPMX19_02206	0.28	-0.2
2,308,816	-		MPMX19_02206	0.28	-1.4
2,308,956	+		MPMX19_02206	0.43	+0.2
2,308,956	+		MPMX19_02206	0.43	+0.3
2,308,956	+		MPMX19_02206	0.43	-0.9
2,308,956	+		MPMX19_02206	0.43	-0.1
2,308,956	+		MPMX19_02206	0.43	+1.2
2,308,956	+		MPMX19_02206	0.43	+0.5
2,308,956	+		MPMX19_02206	0.43	-0.2
2,308,956	+		MPMX19_02206	0.43	-0.4
2,308,956	+		MPMX19_02206	0.43	+0.8
2,308,957	-		MPMX19_02206	0.43	-0.9
2,308,957	-		MPMX19_02206	0.43	+0.4
2,308,957	-		MPMX19_02206	0.43	-0.7
2,308,957	-		MPMX19_02206	0.43	+0.1
2,308,957	-		MPMX19_02206	0.43	+0.9
2,308,957	-		MPMX19_02206	0.43	-1.6
2,309,181	+		MPMX19_02206	0.68	-1.2
2,309,181	+		MPMX19_02206	0.68	+0.4
2,309,181	+		MPMX19_02206	0.68	+0.9
2,309,181	+		MPMX19_02206	0.68	-1.1
2,309,181	+		MPMX19_02206	0.68	-0.2
2,309,181	+		MPMX19_02206	0.68	+1.1
2,309,181	+		MPMX19_02206	0.68	-1.1
2,309,181	+		MPMX19_02206	0.68	-0.3
2,309,181	+		MPMX19_02206	0.68	-0.3
2,309,181	+		MPMX19_02206	0.68	-0.3
2,309,182	-		MPMX19_02206	0.68	+0.1
2,309,182	-		MPMX19_02206	0.68	-1.3
2,309,182	-		MPMX19_02206	0.68	+0.1
2,309,376	+		MPMX19_02206	0.89	-1.1
2,309,485	-				+1.8
2,309,485	-				-1.3
2,309,520	+				+1.0
2,309,520	+				-1.6
2,309,520	+				-0.3
2,309,520	+				+0.1
2,309,521	-				-0.8
2,309,521	-				-2.5
2,309,521	-				+0.8
2,309,521	-				+0.5
2,309,521	-				+1.2
2,309,521	-				-0.7
2,309,521	-				-0.3
2,309,521	-				+1.4
2,309,521	-				+0.4
2,309,539	-				+1.2
2,309,551	+				+1.7
2,309,551	+				+0.1
2,309,552	-				-0.6
2,309,552	-				-0.5
2,309,570	+				+0.1
2,309,570	+				-0.2
2,309,571	-				+0.8
2,309,571	-				-1.5
2,309,571	-				+1.9
2,309,571	-				+0.5
2,309,571	-				-0.0
2,309,571	-				-0.4
2,309,571	-				-0.9
2,310,119	+		MPMX19_02207	0.85	-0.5
2,310,119	+		MPMX19_02207	0.85	-1.1
2,310,137	+		MPMX19_02207	0.88	-0.4
2,310,138	-		MPMX19_02207	0.88	-0.5
2,310,138	-		MPMX19_02207	0.88	-0.6
2,310,138	-		MPMX19_02207	0.88	-0.8
2,310,138	-		MPMX19_02207	0.88	-1.0
2,310,138	-		MPMX19_02207	0.88	-1.8
2,310,138	-		MPMX19_02207	0.88	-1.2
2,310,898	+				-0.3
2,310,899	-				-1.3
2,310,899	-				-0.3
2,310,899	-				-1.8
2,310,899	-				-1.0
2,310,899	-				-1.5
2,310,899	-				-1.2
2,310,899	-				-2.5
2,310,899	-				-2.6
2,310,968	+				-0.6
2,310,968	+				-1.1
2,310,968	-				-0.1
2,310,969	-				+0.1
2,310,969	-				-0.3
2,310,969	-				-1.6
2,310,969	-				+1.1
2,310,969	-				-1.6
2,310,969	-				+0.1
2,310,969	-				-0.7
2,310,987	-				+0.4
2,310,987	-				-0.6
2,310,987	-				+0.6
2,310,987	-				+0.2