Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02120

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,218,658	+		MPMX19_02119	0.67	+0.5
2,218,658	+		MPMX19_02119	0.67	-1.0
2,218,658	+		MPMX19_02119	0.67	-2.4
2,218,658	+		MPMX19_02119	0.67	-0.7
2,218,658	+		MPMX19_02119	0.67	-2.2
2,218,658	+		MPMX19_02119	0.67	+0.6
2,218,658	+		MPMX19_02119	0.67	-0.1
2,218,658	+		MPMX19_02119	0.67	-0.2
2,218,658	+		MPMX19_02119	0.67	+1.0
2,218,658	+		MPMX19_02119	0.67	-1.0
2,218,658	+		MPMX19_02119	0.67	+0.4
2,218,658	+		MPMX19_02119	0.67	+0.1
2,218,658	+		MPMX19_02119	0.67	+0.9
2,218,658	+		MPMX19_02119	0.67	-1.5
2,218,658	+		MPMX19_02119	0.67	+0.5
2,218,658	+		MPMX19_02119	0.67	-0.7
2,218,658	+		MPMX19_02119	0.67	-0.8
2,218,659	-		MPMX19_02119	0.67	-0.9
2,218,659	-		MPMX19_02119	0.67	-0.5
2,218,659	-		MPMX19_02119	0.67	+1.2
2,218,659	-		MPMX19_02119	0.67	+0.1
2,218,659	-		MPMX19_02119	0.67	-0.9
2,218,659	-		MPMX19_02119	0.67	-0.4
2,218,659	-		MPMX19_02119	0.67	-0.2
2,218,659	-		MPMX19_02119	0.67	+0.2
2,218,659	-		MPMX19_02119	0.67	+0.5
2,218,659	-		MPMX19_02119	0.67	+0.4
2,218,659	-		MPMX19_02119	0.67	+0.5
2,218,659	-		MPMX19_02119	0.67	+0.8
2,218,659	-		MPMX19_02119	0.67	-1.4
2,218,659	-		MPMX19_02119	0.67	-0.6
2,218,659	-		MPMX19_02119	0.67	+2.1
2,218,659	-		MPMX19_02119	0.67	+0.4
2,218,659	-		MPMX19_02119	0.67	-1.5
2,218,659	-		MPMX19_02119	0.67	+0.3
2,218,659	-		MPMX19_02119	0.67	-0.1
2,219,086	+				+0.1
2,219,086	+				-1.0
2,219,086	+				+0.7
2,219,086	+				-0.1
2,219,086	+				-1.7
2,219,086	+				-0.0
2,219,086	+				+0.5
2,219,086	+				-0.8
2,219,086	+				-0.4
2,219,086	+				-0.7
2,219,087	-				-1.1
2,219,087	-				+0.6
2,219,087	-				+0.6
2,219,087	-				-1.4
2,219,116	+				-1.7
2,219,116	+				-1.3
2,219,432	+		MPMX19_02120	0.84	-0.1
2,219,432	+		MPMX19_02120	0.84	+1.2
2,219,432	+		MPMX19_02120	0.84	-0.2
2,219,433	-		MPMX19_02120	0.85	+0.2
2,219,433	-		MPMX19_02120	0.85	-1.4
2,219,433	-		MPMX19_02120	0.85	-1.1
2,219,550	+				-2.4
2,219,550	+				+1.0
2,219,550	+				+0.4
2,219,550	+				-0.2
2,219,550	+				-1.3
2,219,550	+				-0.2
2,219,550	+				+0.6
2,219,550	+				+0.9
2,219,550	+				+0.8
2,219,551	-				+0.3
2,219,551	-				-1.8
2,219,551	-				-0.8
2,219,551	-				-0.7
2,219,551	-				+0.3
2,219,551	-				+0.5
2,219,551	-				+0.5
2,219,551	-				-1.4
2,219,551	-				-1.4
2,219,551	-				-0.7
2,219,551	-				-0.7
2,219,551	-				-1.7
2,219,645	+		MPMX19_02121	0.12	-1.7
2,219,645	+		MPMX19_02121	0.12	+0.8
2,219,646	-		MPMX19_02121	0.12	-1.5
2,219,652	-		MPMX19_02121	0.13	+0.1
2,219,652	-		MPMX19_02121	0.13	-0.8
2,220,085	+		MPMX19_02121	0.67	+0.1
2,220,085	+		MPMX19_02121	0.67	-0.8
2,220,085	+		MPMX19_02121	0.67	-0.8
2,220,085	+		MPMX19_02121	0.67	-1.2
2,220,085	+		MPMX19_02121	0.67	-0.4
2,220,085	+		MPMX19_02121	0.67	-0.4
2,220,085	+		MPMX19_02121	0.67	-0.4
2,220,085	+		MPMX19_02121	0.67	-1.7
2,220,085	+		MPMX19_02121	0.67	-0.5
2,220,085	+		MPMX19_02121	0.67	-1.4
2,220,085	+		MPMX19_02121	0.67	-0.2
2,220,085	+		MPMX19_02121	0.67	+0.1
2,220,085	+		MPMX19_02121	0.67	-1.6
2,220,085	+		MPMX19_02121	0.67	-2.1
2,220,085	+		MPMX19_02121	0.67	-1.8
2,220,085	+		MPMX19_02121	0.67	-0.4
2,220,086	-		MPMX19_02121	0.67	-0.7
2,220,086	-		MPMX19_02121	0.67	-0.1
2,220,086	-		MPMX19_02121	0.67	+0.2
2,220,086	-		MPMX19_02121	0.67	-0.2
2,220,086	-		MPMX19_02121	0.67	+0.7
2,220,086	-		MPMX19_02121	0.67	+2.1
2,220,086	-		MPMX19_02121	0.67	-1.1
2,220,086	-		MPMX19_02121	0.67	-0.7
2,220,086	-		MPMX19_02121	0.67	-0.4
2,220,086	-		MPMX19_02121	0.67	-0.2
2,220,086	-		MPMX19_02121	0.67	+1.2
2,220,086	-		MPMX19_02121	0.67	-1.4
2,220,086	-		MPMX19_02121	0.67	-1.4
2,220,086	-		MPMX19_02121	0.67	+0.5
2,220,086	-		MPMX19_02121	0.67	+0.4
2,220,086	-		MPMX19_02121	0.67	-0.9
2,220,086	-		MPMX19_02121	0.67	+0.1
2,220,086	-		MPMX19_02121	0.67	-0.2
2,220,086	-		MPMX19_02121	0.67	-0.8
2,220,086	-		MPMX19_02121	0.67	+0.1
2,220,086	-		MPMX19_02121	0.67	+0.2
2,220,086	-		MPMX19_02121	0.67	-0.6
2,220,086	-		MPMX19_02121	0.67	+0.4
2,220,086	-		MPMX19_02121	0.67	+0.8
2,220,086	-		MPMX19_02121	0.67	+0.1
2,220,086	-		MPMX19_02121	0.67	-0.7
2,220,086	-		MPMX19_02121	0.67	+0.8
2,220,086	-		MPMX19_02121	0.67	+2.1
2,220,088	+		MPMX19_02121	0.68	+1.1
2,220,088	+		MPMX19_02121	0.68	+0.2
2,220,088	+		MPMX19_02121	0.68	-0.5
2,220,088	+		MPMX19_02121	0.68	-1.3
2,220,088	+		MPMX19_02121	0.68	-0.9
2,220,088	+		MPMX19_02121	0.68	+0.1
2,220,088	+		MPMX19_02121	0.68	-0.5
2,220,088	+		MPMX19_02121	0.68	-0.4
2,220,088	+		MPMX19_02121	0.68	+1.4
2,220,088	+		MPMX19_02121	0.68	+0.4
2,220,089	-		MPMX19_02121	0.68	-1.5
2,220,089	-		MPMX19_02121	0.68	-1.1
2,220,089	-		MPMX19_02121	0.68	-0.7
2,220,089	-		MPMX19_02121	0.68	+0.9
2,220,089	-		MPMX19_02121	0.68	-0.9
2,220,089	-		MPMX19_02121	0.68	-1.3
2,220,089	-		MPMX19_02121	0.68	+0.1
2,220,089	-		MPMX19_02121	0.68	-1.4
2,220,089	-		MPMX19_02121	0.68	-0.7
2,220,139	+		MPMX19_02121	0.74	-1.1
2,220,139	+		MPMX19_02121	0.74	-2.1
2,220,140	-		MPMX19_02121	0.74	+0.3
2,220,254	-		MPMX19_02121	0.88	-0.3
2,220,254	-		MPMX19_02121	0.88	-0.0
2,220,254	-		MPMX19_02121	0.88	-1.3
2,220,277	+				-2.9
2,220,277	+				-1.0
2,220,277	+				+0.7
2,220,420	+		MPMX19_02122	0.14	-1.2
2,220,420	+		MPMX19_02122	0.14	+1.7
2,220,420	+		MPMX19_02122	0.14	-1.5
2,220,420	+		MPMX19_02122	0.14	+0.1
2,220,420	+		MPMX19_02122	0.14	-0.9
2,220,420	+		MPMX19_02122	0.14	-1.1
2,220,420	+		MPMX19_02122	0.14	-0.3
2,220,420	+		MPMX19_02122	0.14	+0.5
2,220,420	+		MPMX19_02122	0.14	-0.6
2,220,421	-		MPMX19_02122	0.14	-0.3
2,220,421	-		MPMX19_02122	0.14	+0.1
2,220,421	-		MPMX19_02122	0.14	+0.4
2,220,421	-		MPMX19_02122	0.14	+0.1
2,220,421	-		MPMX19_02122	0.14	+0.0
2,220,421	-		MPMX19_02122	0.14	+1.9