Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01972

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,053,363	+		MPMX19_01971	0.25	+0.2
2,053,363	+		MPMX19_01971	0.25	+0.3
2,053,364	-		MPMX19_01971	0.25	+1.0
2,053,364	-		MPMX19_01971	0.25	+0.4
2,053,364	-		MPMX19_01971	0.25	+0.7
2,053,534	+		MPMX19_01971	0.39	-0.8
2,053,534	+		MPMX19_01971	0.39	-0.2
2,053,534	+		MPMX19_01971	0.39	+0.1
2,053,534	+		MPMX19_01971	0.39	-0.9
2,053,534	+		MPMX19_01971	0.39	-1.0
2,053,535	-		MPMX19_01971	0.39	-1.0
2,053,535	-		MPMX19_01971	0.39	-0.8
2,053,535	-		MPMX19_01971	0.39	-1.1
2,053,603	+		MPMX19_01971	0.45	-1.0
2,053,603	+		MPMX19_01971	0.45	-0.2
2,053,603	+		MPMX19_01971	0.45	-0.2
2,053,603	+		MPMX19_01971	0.45	-0.5
2,053,603	+		MPMX19_01971	0.45	-1.7
2,053,603	+		MPMX19_01971	0.45	-0.8
2,053,603	+		MPMX19_01971	0.45	-1.7
2,053,603	+		MPMX19_01971	0.45	-0.3
2,053,603	+		MPMX19_01971	0.45	-0.6
2,053,603	+		MPMX19_01971	0.45	-1.0
2,053,603	+		MPMX19_01971	0.45	-0.6
2,053,604	-		MPMX19_01971	0.45	-1.9
2,053,604	-		MPMX19_01971	0.45	-0.5
2,053,604	-		MPMX19_01971	0.45	-0.2
2,053,604	-		MPMX19_01971	0.45	-1.8
2,053,604	-		MPMX19_01971	0.45	+0.2
2,053,604	-		MPMX19_01971	0.45	-0.9
2,053,604	-		MPMX19_01971	0.45	-0.1
2,053,604	-		MPMX19_01971	0.45	+0.1
2,053,604	-		MPMX19_01971	0.45	+0.2
2,053,604	-		MPMX19_01971	0.45	+0.0
2,053,604	-		MPMX19_01971	0.45	-2.2
2,053,604	-		MPMX19_01971	0.45	-0.4
2,053,604	-		MPMX19_01971	0.45	+0.3
2,053,604	-		MPMX19_01971	0.45	-0.1
2,053,618	+		MPMX19_01971	0.46	-0.2
2,053,618	+		MPMX19_01971	0.46	+0.9
2,053,618	+		MPMX19_01971	0.46	-1.0
2,053,618	+		MPMX19_01971	0.46	-0.3
2,053,618	+		MPMX19_01971	0.46	-0.4
2,053,618	+		MPMX19_01971	0.46	-0.0
2,053,618	+		MPMX19_01971	0.46	-0.4
2,053,618	+		MPMX19_01971	0.46	-1.2
2,053,618	+		MPMX19_01971	0.46	+0.3
2,053,618	+		MPMX19_01971	0.46	-0.7
2,053,618	+		MPMX19_01971	0.46	-0.4
2,053,618	+		MPMX19_01971	0.46	-0.0
2,053,618	+		MPMX19_01971	0.46	+0.6
2,053,619	-		MPMX19_01971	0.47	+0.8
2,053,619	-		MPMX19_01971	0.47	+0.6
2,053,619	-		MPMX19_01971	0.47	-1.1
2,053,619	-		MPMX19_01971	0.47	+1.0
2,053,619	-		MPMX19_01971	0.47	-1.5
2,053,619	-		MPMX19_01971	0.47	-0.2
2,053,619	-		MPMX19_01971	0.47	-0.7
2,053,850	-		MPMX19_01971	0.66	-1.0
2,053,858	+		MPMX19_01971	0.67	-0.0
2,053,858	+		MPMX19_01971	0.67	-0.2
2,053,859	-		MPMX19_01971	0.67	-0.5
2,053,859	-		MPMX19_01971	0.67	-1.8
2,053,979	-		MPMX19_01971	0.77	-0.4
2,053,990	+		MPMX19_01971	0.78	+1.6
2,053,990	+		MPMX19_01971	0.78	+0.2
2,053,990	+		MPMX19_01971	0.78	-0.7
2,053,990	+		MPMX19_01971	0.78	+0.6
2,053,991	-		MPMX19_01971	0.79	-0.0
2,053,991	-		MPMX19_01971	0.79	-1.8
2,053,991	-		MPMX19_01971	0.79	+1.1
2,053,991	-		MPMX19_01971	0.79	+1.0
2,053,991	-		MPMX19_01971	0.79	+0.2
2,053,991	-		MPMX19_01971	0.79	-0.4
2,054,041	+		MPMX19_01971	0.83	-0.2
2,054,041	+		MPMX19_01971	0.83	-0.2
2,054,041	+		MPMX19_01971	0.83	+0.2
2,054,041	+		MPMX19_01971	0.83	+0.2
2,054,042	-		MPMX19_01971	0.83	-1.0
2,054,042	-		MPMX19_01971	0.83	-1.2
2,054,042	-		MPMX19_01971	0.83	-1.3
2,054,042	-		MPMX19_01971	0.83	+0.6
2,054,042	-		MPMX19_01971	0.83	-1.4
2,054,042	-		MPMX19_01971	0.83	-0.2
2,054,129	+				-1.8
2,054,129	+				-0.2
2,054,129	+				+0.6
2,054,129	+				+1.6
2,054,129	+				+1.0
2,054,129	+				-1.7
2,054,129	+				-0.4
2,054,130	-				-0.8
2,054,130	-				+0.4
2,054,130	-				+0.4
2,054,130	-				-0.8
2,054,130	-				-0.8
2,054,130	-				+1.6
2,054,130	-				+0.4
2,054,130	-				-1.2
2,054,130	-				-1.4
2,054,254	+				-0.2
2,054,254	+				-0.9
2,054,254	+				-0.8
2,054,254	+				+0.3
2,054,254	+				+0.3
2,054,254	+				+0.4
2,054,255	-				+0.7
2,054,255	-				-0.7
2,054,283	+				-0.5
2,054,283	+				-2.4
2,054,283	+				-1.0
2,054,283	+				-0.2
2,054,283	+				+0.8
2,054,283	+				+0.7
2,054,283	+				-0.6
2,054,283	+				+1.0
2,054,283	+				-1.4
2,054,284	-				-1.3
2,054,284	-				+0.6
2,054,284	-				-0.6
2,054,284	-				+0.8
2,054,284	-				+0.6
2,054,284	-				-0.7
2,054,284	-				+1.6
2,054,284	-				+0.4
2,054,284	-				-1.2
2,054,284	-				+1.0
2,054,369	+				-1.2
2,054,369	+				-0.4
2,054,370	-				-1.0
2,054,951	+		MPMX19_01972	0.46	+0.6
2,054,952	-		MPMX19_01972	0.46	+0.5
2,055,017	+		MPMX19_01972	0.50	-1.7
2,055,017	+		MPMX19_01972	0.50	+0.3
2,055,017	+		MPMX19_01972	0.50	-1.9
2,055,017	+		MPMX19_01972	0.50	-0.3
2,055,017	+		MPMX19_01972	0.50	+0.9
2,055,017	+		MPMX19_01972	0.50	+1.6
2,055,018	-		MPMX19_01972	0.50	-0.2
2,055,018	-		MPMX19_01972	0.50	+0.7
2,055,018	-		MPMX19_01972	0.50	-0.4
2,055,018	-		MPMX19_01972	0.50	-1.4
2,055,018	-		MPMX19_01972	0.50	-1.0
2,055,018	-		MPMX19_01972	0.50	+1.1
2,055,275	+		MPMX19_01972	0.68	+0.4
2,055,275	+		MPMX19_01972	0.68	-0.8
2,055,275	+		MPMX19_01972	0.68	+0.2
2,055,275	+		MPMX19_01972	0.68	+1.0
2,055,275	+		MPMX19_01972	0.68	+0.7
2,055,275	+		MPMX19_01972	0.68	+0.2
2,055,275	+		MPMX19_01972	0.68	+0.4
2,055,275	+		MPMX19_01972	0.68	-1.1
2,055,275	+		MPMX19_01972	0.68	+0.6
2,055,275	+		MPMX19_01972	0.68	+0.1
2,055,275	+		MPMX19_01972	0.68	+0.6
2,055,275	+		MPMX19_01972	0.68	+1.6
2,055,276	-		MPMX19_01972	0.68	+0.4
2,055,276	-		MPMX19_01972	0.68	-0.2
2,055,276	-		MPMX19_01972	0.68	+0.9
2,055,276	-		MPMX19_01972	0.68	+1.6
2,055,276	-		MPMX19_01972	0.68	+0.5
2,055,276	-		MPMX19_01972	0.68	+0.3
2,055,276	-		MPMX19_01972	0.68	+1.2
2,055,276	-		MPMX19_01972	0.68	-0.0
2,055,276	-		MPMX19_01972	0.68	-0.3
2,055,506	+		MPMX19_01972	0.84	+1.2
2,055,506	+		MPMX19_01972	0.84	+0.7
2,055,506	+		MPMX19_01972	0.84	-1.6
2,055,506	+		MPMX19_01972	0.84	+0.7
2,055,506	+		MPMX19_01972	0.84	-0.0
2,055,507	-		MPMX19_01972	0.84	+0.1
2,055,507	-		MPMX19_01972	0.84	+0.3
2,055,507	-		MPMX19_01972	0.84	+0.2
2,055,507	-		MPMX19_01972	0.84	-0.4
2,055,592	+				-0.5
2,055,592	+				-0.7
2,055,592	+				-0.8
2,055,592	+				-0.4
2,055,592	+				+0.4
2,055,592	+				+0.7
2,055,592	+				-1.0
2,055,593	-				-1.6
2,055,593	-				-1.7
2,055,593	-				-0.4
2,055,593	-				-2.0
2,055,593	-				-0.8
2,055,833	-				-1.9
2,056,638	-		MPMX19_01973	0.66	+0.4