Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01943

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,023,803	-		MPMX19_01941	0.74	-0.7
2,023,803	-		MPMX19_01941	0.74	-1.6
2,023,837	+		MPMX19_01941	0.85	+0.3
2,023,837	+		MPMX19_01941	0.85	+0.8
2,023,837	+		MPMX19_01941	0.85	+0.5
2,023,837	+		MPMX19_01941	0.85	-0.8
2,023,837	+		MPMX19_01941	0.85	-0.2
2,023,837	+		MPMX19_01941	0.85	+0.6
2,023,837	+		MPMX19_01941	0.85	+0.2
2,023,837	+		MPMX19_01941	0.85	-1.7
2,023,837	+		MPMX19_01941	0.85	-0.9
2,023,837	+		MPMX19_01941	0.85	-1.6
2,023,837	+		MPMX19_01941	0.85	+0.9
2,023,837	+		MPMX19_01941	0.85	-0.8
2,023,838	-		MPMX19_01941	0.86	-0.6
2,023,838	-		MPMX19_01941	0.86	-0.8
2,023,838	-		MPMX19_01941	0.86	-2.0
2,023,838	-		MPMX19_01941	0.86	-1.0
2,023,838	-		MPMX19_01941	0.86	-0.0
2,024,091	+				-0.1
2,024,091	+				-2.2
2,024,091	+				-0.8
2,024,091	+				-0.2
2,024,091	+				+0.6
2,024,092	-				+0.8
2,024,092	-				-0.2
2,024,092	-				-0.3
2,024,092	-				+2.6
2,024,092	-				-0.2
2,024,092	-				-1.1
2,024,092	-				-1.2
2,024,092	-				-1.6
2,024,133	+		MPMX19_01942	0.15	-0.8
2,024,133	+		MPMX19_01942	0.15	+0.6
2,024,134	-		MPMX19_01942	0.15	-0.8
2,024,134	-		MPMX19_01942	0.15	-0.3
2,024,164	+		MPMX19_01942	0.19	-1.0
2,024,164	+		MPMX19_01942	0.19	-0.1
2,024,164	+		MPMX19_01942	0.19	-0.2
2,024,164	+		MPMX19_01942	0.19	+0.4
2,024,164	+		MPMX19_01942	0.19	+2.2
2,024,165	-		MPMX19_01942	0.19	-0.1
2,024,165	-		MPMX19_01942	0.19	-1.1
2,024,203	+		MPMX19_01942	0.25	-0.9
2,024,203	+		MPMX19_01942	0.25	-2.2
2,024,203	+		MPMX19_01942	0.25	+0.8
2,024,203	+		MPMX19_01942	0.25	+0.2
2,024,204	-		MPMX19_01942	0.25	-0.3
2,024,204	-		MPMX19_01942	0.25	+0.6
2,024,204	-		MPMX19_01942	0.25	+0.7
2,024,204	-		MPMX19_01942	0.25	+0.2
2,024,204	-		MPMX19_01942	0.25	+1.1
2,024,204	-		MPMX19_01942	0.25	-0.4
2,024,304	+		MPMX19_01942	0.39	+0.3
2,024,304	+		MPMX19_01942	0.39	+0.7
2,024,304	+		MPMX19_01942	0.39	+1.6
2,024,304	+		MPMX19_01942	0.39	-0.1
2,024,304	+		MPMX19_01942	0.39	+1.1
2,024,304	+		MPMX19_01942	0.39	+0.9
2,024,304	+		MPMX19_01942	0.39	+0.6
2,024,305	-		MPMX19_01942	0.39	+1.3
2,024,305	-		MPMX19_01942	0.39	-0.9
2,024,305	-		MPMX19_01942	0.39	-0.5
2,024,305	-		MPMX19_01942	0.39	-0.8
2,024,348	+		MPMX19_01942	0.45	-1.0
2,024,348	+		MPMX19_01942	0.45	+1.8
2,024,349	-		MPMX19_01942	0.45	+1.1
2,024,349	-		MPMX19_01942	0.45	-2.1
2,024,359	+		MPMX19_01942	0.47	-0.8
2,024,359	+		MPMX19_01942	0.47	+0.3
2,024,359	+		MPMX19_01942	0.47	+0.2
2,024,360	-		MPMX19_01942	0.47	+1.6
2,024,360	-		MPMX19_01942	0.47	-0.6
2,024,360	-		MPMX19_01942	0.47	+1.0
2,024,360	-		MPMX19_01942	0.47	-0.4
2,024,360	-		MPMX19_01942	0.47	-0.2
2,024,608	+		MPMX19_01942	0.82	-0.0
2,024,608	+		MPMX19_01942	0.82	-0.0
2,024,608	+		MPMX19_01942	0.82	+0.4
2,024,608	+		MPMX19_01942	0.82	-0.5
2,024,609	-		MPMX19_01942	0.82	-0.0
2,024,609	-		MPMX19_01942	0.82	+0.1
2,024,609	-		MPMX19_01942	0.82	+0.3
2,024,609	-		MPMX19_01942	0.82	+0.2
2,024,609	-		MPMX19_01942	0.82	+0.6
2,024,609	-		MPMX19_01942	0.82	-1.0
2,024,623	+		MPMX19_01942	0.84	-0.8
2,024,623	+		MPMX19_01942	0.84	+0.0
2,024,623	+		MPMX19_01942	0.84	+0.6
2,024,624	-		MPMX19_01942	0.84	-0.4
2,024,624	-		MPMX19_01942	0.84	+0.2
2,024,624	-		MPMX19_01942	0.84	-2.0
2,024,624	-		MPMX19_01942	0.84	-0.9
2,024,624	-		MPMX19_01942	0.84	+0.2
2,024,624	-		MPMX19_01942	0.84	+0.1
2,024,720	+				+0.2
2,024,720	+				+0.2
2,024,720	+				+0.5
2,024,720	+				+1.3
2,024,720	+				+2.4
2,024,721	-				+0.4
2,024,721	-				-0.9
2,026,013	-				+0.8
2,026,013	-				-0.2
2,026,013	-				+0.3
2,026,013	-				-0.3
2,026,013	-				-0.2
2,026,037	-				+1.0
2,026,093	-				+0.2
2,026,166	+				+1.2
2,026,166	+				+0.1
2,026,166	+				+1.4
2,026,167	-				+1.1
2,026,167	-				-0.3
2,026,604	+		MPMX19_01944	0.58	-0.8
2,026,604	+		MPMX19_01944	0.58	-1.4
2,026,604	+		MPMX19_01944	0.58	-0.0
2,026,604	+		MPMX19_01944	0.58	+0.6
2,026,604	+		MPMX19_01944	0.58	-0.4
2,026,605	-		MPMX19_01944	0.58	-1.1
2,026,605	-		MPMX19_01944	0.58	-0.2
2,026,605	-		MPMX19_01944	0.58	-0.2
2,026,605	-		MPMX19_01944	0.58	-0.8
2,026,605	-		MPMX19_01944	0.58	-0.3
2,026,605	-		MPMX19_01944	0.58	-0.9
2,026,605	-		MPMX19_01944	0.58	-0.9
2,026,605	-		MPMX19_01944	0.58	+0.9
2,026,605	-		MPMX19_01944	0.58	-0.9
2,026,613	+		MPMX19_01944	0.59	+0.2
2,026,614	-		MPMX19_01944	0.59	+0.2
2,026,614	-		MPMX19_01944	0.59	-1.0
2,026,614	-		MPMX19_01944	0.59	-0.2
2,026,614	-		MPMX19_01944	0.59	-0.0
2,026,614	-		MPMX19_01944	0.59	-1.0
2,026,614	-		MPMX19_01944	0.59	-0.9
2,026,763	+		MPMX19_01944	0.79	+0.8
2,026,763	+		MPMX19_01944	0.79	+0.2
2,026,763	+		MPMX19_01944	0.79	-0.9
2,026,763	+		MPMX19_01944	0.79	+0.4
2,026,763	+		MPMX19_01944	0.79	-1.9
2,026,763	+		MPMX19_01944	0.79	+0.0
2,026,763	+		MPMX19_01944	0.79	+0.8
2,026,764	-		MPMX19_01944	0.79	+0.6
2,026,764	-		MPMX19_01944	0.79	+0.9
2,026,764	-		MPMX19_01944	0.79	-0.2
2,026,764	-		MPMX19_01944	0.79	+0.8
2,026,764	-		MPMX19_01944	0.79	-0.1
2,026,764	-		MPMX19_01944	0.79	-0.2
2,026,764	-		MPMX19_01944	0.79	+1.6
2,026,811	+		MPMX19_01944	0.85	+0.2
2,026,812	-		MPMX19_01944	0.86	-0.4
2,026,812	-		MPMX19_01944	0.86	-1.3
2,026,812	-		MPMX19_01944	0.86	-0.8
2,026,895	+				-0.6
2,026,895	+				-0.7
2,026,895	+				+0.7
2,026,895	+				+0.1
2,026,895	+				+0.2
2,026,895	+				-1.5
2,026,895	+				+0.6
2,026,895	+				-0.2
2,026,895	+				+2.1
2,026,895	+				-0.4
2,026,895	+				-1.6
2,026,895	+				+1.0
2,026,895	+				+0.6
2,026,895	+				+1.3
2,026,895	+				+1.2
2,026,895	+				+0.3
2,026,895	+				-2.2
2,026,895	+				-1.1
2,026,895	+				+0.1
2,026,895	+				-0.2
2,026,895	+				+0.0
2,026,895	+				+0.8
2,026,896	-				-0.8
2,026,896	-				-0.1
2,026,896	-				+1.1
2,026,896	-				-0.2
2,026,896	-				+0.6
2,026,896	-				+0.3
2,026,896	-				-1.2
2,026,896	-				+0.1
2,026,896	-				+0.2
2,026,896	-				+0.0
2,026,896	-				-1.1
2,026,987	+				-2.4
2,026,988	-				-1.1
2,026,988	-				+0.2
2,026,988	-				+0.1