Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01935

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,015,899	-				+2.1
2,015,899	-				+0.0
2,015,899	-				+1.2
2,015,956	+		MPMX19_01934	0.16	-0.9
2,015,957	-		MPMX19_01934	0.16	+1.3
2,015,957	-		MPMX19_01934	0.16	+0.4
2,016,019	+		MPMX19_01934	0.26	-1.2
2,016,019	+		MPMX19_01934	0.26	-0.8
2,016,019	+		MPMX19_01934	0.26	+0.7
2,016,019	+		MPMX19_01934	0.26	-0.7
2,016,019	+		MPMX19_01934	0.26	+0.1
2,016,019	+		MPMX19_01934	0.26	+0.1
2,016,020	-		MPMX19_01934	0.26	-1.0
2,016,020	-		MPMX19_01934	0.26	-1.5
2,016,020	-		MPMX19_01934	0.26	-0.2
2,016,020	-		MPMX19_01934	0.26	+2.4
2,016,020	-		MPMX19_01934	0.26	-0.7
2,016,020	-		MPMX19_01934	0.26	-0.4
2,016,020	-		MPMX19_01934	0.26	-2.4
2,016,091	+		MPMX19_01934	0.37	-0.6
2,016,091	+		MPMX19_01934	0.37	+0.8
2,016,091	+		MPMX19_01934	0.37	+0.3
2,016,091	+		MPMX19_01934	0.37	-0.6
2,016,091	+		MPMX19_01934	0.37	-0.6
2,016,091	+		MPMX19_01934	0.37	+1.8
2,016,091	+		MPMX19_01934	0.37	+0.2
2,016,091	+		MPMX19_01934	0.37	-1.7
2,016,091	+		MPMX19_01934	0.37	+1.4
2,016,091	+		MPMX19_01934	0.37	-1.6
2,016,091	+		MPMX19_01934	0.37	-0.6
2,016,091	+		MPMX19_01934	0.37	+0.8
2,016,091	+		MPMX19_01934	0.37	-0.1
2,016,091	+		MPMX19_01934	0.37	-2.1
2,016,092	-		MPMX19_01934	0.37	+1.2
2,016,092	-		MPMX19_01934	0.37	+0.1
2,016,092	-		MPMX19_01934	0.37	-1.0
2,016,092	-		MPMX19_01934	0.37	+0.8
2,016,092	-		MPMX19_01934	0.37	+0.0
2,016,092	-		MPMX19_01934	0.37	-0.8
2,016,092	-		MPMX19_01934	0.37	-2.3
2,016,092	-		MPMX19_01934	0.37	-0.2
2,016,092	-		MPMX19_01934	0.37	+0.6
2,016,092	-		MPMX19_01934	0.37	-0.8
2,016,298	+		MPMX19_01934	0.69	-0.6
2,016,298	+		MPMX19_01934	0.69	-1.0
2,016,298	+		MPMX19_01934	0.69	-0.4
2,016,299	-		MPMX19_01934	0.69	+0.5
2,016,299	-		MPMX19_01934	0.69	-0.7
2,016,299	-		MPMX19_01934	0.69	+0.5
2,016,598	-		MPMX19_01935	0.13	+0.1
2,016,684	+		MPMX19_01935	0.28	-1.6
2,016,684	+		MPMX19_01935	0.28	-2.0
2,016,684	+		MPMX19_01935	0.28	-0.8
2,016,685	-		MPMX19_01935	0.28	-0.1
2,016,756	+		MPMX19_01935	0.41	-0.6
2,016,756	+		MPMX19_01935	0.41	-1.1
2,016,756	+		MPMX19_01935	0.41	-0.3
2,016,757	-		MPMX19_01935	0.41	-0.1
2,016,757	-		MPMX19_01935	0.41	-1.9
2,016,757	-		MPMX19_01935	0.41	-0.8
2,017,032	+		MPMX19_01935	0.88	+0.1
2,017,032	+		MPMX19_01935	0.88	-1.5
2,017,032	+		MPMX19_01935	0.88	-0.2
2,017,032	+		MPMX19_01935	0.88	-0.7
2,017,032	+		MPMX19_01935	0.88	+0.6
2,017,032	+		MPMX19_01935	0.88	-0.0
2,017,033	-		MPMX19_01935	0.88	-1.6
2,017,135	-				-0.0
2,017,235	-				-1.1
2,017,235	-				-1.2
2,017,235	-				+1.0
2,017,244	+				-0.2
2,017,244	+				-0.9
2,017,459	-		MPMX19_01936	0.19	-1.7
2,017,615	+		MPMX19_01936	0.32	-0.3
2,017,615	+		MPMX19_01936	0.32	-1.0
2,017,615	+		MPMX19_01936	0.32	-0.1
2,017,615	+		MPMX19_01936	0.32	-1.8
2,017,615	+		MPMX19_01936	0.32	-0.2
2,017,615	+		MPMX19_01936	0.32	-0.7
2,017,615	+		MPMX19_01936	0.32	-1.2
2,017,615	+		MPMX19_01936	0.32	+0.5
2,017,615	+		MPMX19_01936	0.32	+0.8
2,017,615	+		MPMX19_01936	0.32	-0.8
2,017,615	+		MPMX19_01936	0.32	+0.1
2,017,615	+		MPMX19_01936	0.32	-1.9
2,017,616	-		MPMX19_01936	0.33	+0.4
2,017,616	-		MPMX19_01936	0.33	+0.1
2,017,616	-		MPMX19_01936	0.33	+0.0
2,017,616	-		MPMX19_01936	0.33	+0.4
2,017,616	-		MPMX19_01936	0.33	-1.9
2,017,616	-		MPMX19_01936	0.33	+0.8
2,017,616	-		MPMX19_01936	0.33	+0.5
2,017,616	-		MPMX19_01936	0.33	-1.6
2,017,616	-		MPMX19_01936	0.33	+0.3
2,017,616	-		MPMX19_01936	0.33	+0.1
2,017,616	-		MPMX19_01936	0.33	+0.2
2,017,616	-		MPMX19_01936	0.33	-0.5
2,017,616	-		MPMX19_01936	0.33	+0.2
2,017,616	-		MPMX19_01936	0.33	-2.3
2,017,616	-		MPMX19_01936	0.33	-1.3
2,017,616	-		MPMX19_01936	0.33	-0.8
2,017,616	-		MPMX19_01936	0.33	+0.5
2,017,616	-		MPMX19_01936	0.33	-0.4
2,017,616	-		MPMX19_01936	0.33	-0.7
2,017,616	-		MPMX19_01936	0.33	+0.5
2,017,616	-		MPMX19_01936	0.33	-1.3
2,017,616	-		MPMX19_01936	0.33	-0.1
2,017,616	-		MPMX19_01936	0.33	-0.4
2,017,616	-		MPMX19_01936	0.33	-0.1
2,017,616	-		MPMX19_01936	0.33	+0.4
2,017,616	-		MPMX19_01936	0.33	-0.6
2,017,620	+		MPMX19_01936	0.33	-0.2
2,017,620	+		MPMX19_01936	0.33	-0.2
2,017,620	+		MPMX19_01936	0.33	+0.1
2,017,620	+		MPMX19_01936	0.33	-0.0
2,017,620	+		MPMX19_01936	0.33	-0.7
2,017,658	+		MPMX19_01936	0.36	+0.1
2,017,658	+		MPMX19_01936	0.36	-2.3
2,017,658	+		MPMX19_01936	0.36	+0.6
2,017,659	-		MPMX19_01936	0.36	-0.1
2,017,659	-		MPMX19_01936	0.36	-1.2
2,017,714	+		MPMX19_01936	0.41	+0.1
2,017,714	+		MPMX19_01936	0.41	-0.0
2,017,714	+		MPMX19_01936	0.41	-2.3
2,017,801	+		MPMX19_01936	0.48	-1.3
2,017,801	+		MPMX19_01936	0.48	-0.7
2,017,801	+		MPMX19_01936	0.48	+0.5
2,017,802	-		MPMX19_01936	0.48	+0.5
2,017,802	-		MPMX19_01936	0.48	+0.5
2,017,802	-		MPMX19_01936	0.48	-0.2
2,017,802	-		MPMX19_01936	0.48	-0.4
2,017,936	+		MPMX19_01936	0.60	-0.1
2,017,936	+		MPMX19_01936	0.60	-2.0
2,017,936	+		MPMX19_01936	0.60	-1.6
2,017,936	+		MPMX19_01936	0.60	+0.4
2,017,936	+		MPMX19_01936	0.60	-0.8
2,017,936	+		MPMX19_01936	0.60	-0.5
2,017,936	+		MPMX19_01936	0.60	+0.5
2,017,936	+		MPMX19_01936	0.60	-0.9
2,017,936	+		MPMX19_01936	0.60	-1.5
2,017,936	+		MPMX19_01936	0.60	-0.3
2,017,936	+		MPMX19_01936	0.60	-0.8
2,017,936	+		MPMX19_01936	0.60	+0.1
2,017,936	+		MPMX19_01936	0.60	-0.2
2,017,936	+		MPMX19_01936	0.60	+0.4
2,017,936	+		MPMX19_01936	0.60	-0.2
2,017,936	+		MPMX19_01936	0.60	-1.3
2,017,936	+		MPMX19_01936	0.60	-0.5
2,017,936	+		MPMX19_01936	0.60	-0.0
2,017,936	+		MPMX19_01936	0.60	-1.5
2,017,937	-		MPMX19_01936	0.60	-0.2
2,017,937	-		MPMX19_01936	0.60	-0.3
2,017,937	-		MPMX19_01936	0.60	+0.3
2,017,937	-		MPMX19_01936	0.60	-0.2
2,017,937	-		MPMX19_01936	0.60	-0.9
2,017,937	-		MPMX19_01936	0.60	+0.1
2,017,937	-		MPMX19_01936	0.60	-1.4
2,017,937	-		MPMX19_01936	0.60	-0.3
2,017,937	-		MPMX19_01936	0.60	-2.6
2,017,937	-		MPMX19_01936	0.60	-1.3
2,017,937	-		MPMX19_01936	0.60	-0.6