Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01887

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,968,473	+		MPMX19_01886	0.54	+0.1
1,968,473	+		MPMX19_01886	0.54	+0.2
1,968,473	+		MPMX19_01886	0.54	-0.3
1,968,473	+		MPMX19_01886	0.54	-1.2
1,968,473	+		MPMX19_01886	0.54	-0.8
1,968,474	-		MPMX19_01886	0.54	+0.7
1,968,474	-		MPMX19_01886	0.54	+0.6
1,968,474	-		MPMX19_01886	0.54	+0.6
1,968,474	-		MPMX19_01886	0.54	-1.6
1,968,474	-		MPMX19_01886	0.54	-0.6
1,968,488	+		MPMX19_01886	0.55	-1.2
1,968,488	+		MPMX19_01886	0.55	-1.5
1,968,489	-		MPMX19_01886	0.55	-0.8
1,968,489	-		MPMX19_01886	0.55	-1.0
1,968,489	-		MPMX19_01886	0.55	-1.6
1,968,494	+		MPMX19_01886	0.56	+0.6
1,968,494	+		MPMX19_01886	0.56	-0.1
1,968,494	+		MPMX19_01886	0.56	-0.0
1,968,494	+		MPMX19_01886	0.56	+0.4
1,968,494	+		MPMX19_01886	0.56	-0.2
1,968,494	+		MPMX19_01886	0.56	-1.0
1,968,494	+		MPMX19_01886	0.56	+0.1
1,968,495	-		MPMX19_01886	0.56	-0.3
1,968,495	-		MPMX19_01886	0.56	-0.0
1,968,495	-		MPMX19_01886	0.56	+0.8
1,968,495	-		MPMX19_01886	0.56	+0.8
1,968,563	+		MPMX19_01886	0.61	-1.6
1,968,563	+		MPMX19_01886	0.61	-1.1
1,968,563	+		MPMX19_01886	0.61	+0.2
1,968,563	+		MPMX19_01886	0.61	-0.8
1,968,564	-		MPMX19_01886	0.61	-1.8
1,968,564	-		MPMX19_01886	0.61	+0.6
1,968,564	-		MPMX19_01886	0.61	-0.0
1,968,564	-		MPMX19_01886	0.61	-0.4
1,968,564	-		MPMX19_01886	0.61	-0.8
1,968,564	-		MPMX19_01886	0.61	+0.8
1,968,564	-		MPMX19_01886	0.61	-1.2
1,968,564	-		MPMX19_01886	0.61	-0.9
1,968,564	-		MPMX19_01886	0.61	-1.3
1,968,564	-		MPMX19_01886	0.61	-1.7
1,969,131	+				+0.2
1,969,132	-				+0.2
1,969,132	-				-0.3
1,969,132	-				-1.5
1,969,132	-				-0.9
1,969,204	-				-1.0
1,969,439	+		MPMX19_01887	0.50	-1.1
1,969,439	+		MPMX19_01887	0.50	-0.1
1,969,439	+		MPMX19_01887	0.50	-1.4
1,969,439	+		MPMX19_01887	0.50	-0.3
1,969,439	+		MPMX19_01887	0.50	-1.1
1,969,439	+		MPMX19_01887	0.50	+1.3
1,969,439	+		MPMX19_01887	0.50	-0.5
1,969,439	+		MPMX19_01887	0.50	-0.4
1,969,439	+		MPMX19_01887	0.50	-0.3
1,969,439	+		MPMX19_01887	0.50	-0.9
1,969,439	+		MPMX19_01887	0.50	-1.1
1,969,439	+		MPMX19_01887	0.50	+1.1
1,969,439	+		MPMX19_01887	0.50	-1.1
1,969,439	+		MPMX19_01887	0.50	-2.6
1,969,440	-		MPMX19_01887	0.50	-1.0
1,969,440	-		MPMX19_01887	0.50	-0.3
1,969,440	-		MPMX19_01887	0.50	+0.2
1,969,440	-		MPMX19_01887	0.50	+0.1
1,969,440	-		MPMX19_01887	0.50	-0.8
1,969,440	-		MPMX19_01887	0.50	-0.6
1,969,440	-		MPMX19_01887	0.50	+0.3
1,969,440	-		MPMX19_01887	0.50	-0.5
1,969,440	-		MPMX19_01887	0.50	+0.1
1,969,493	+		MPMX19_01887	0.63	-0.2
1,969,493	+		MPMX19_01887	0.63	+0.4
1,969,493	+		MPMX19_01887	0.63	+0.9
1,969,493	+		MPMX19_01887	0.63	-1.4
1,969,493	+		MPMX19_01887	0.63	-0.3
1,969,493	+		MPMX19_01887	0.63	-1.2
1,969,493	+		MPMX19_01887	0.63	-0.6
1,969,493	+		MPMX19_01887	0.63	+0.9
1,969,493	+		MPMX19_01887	0.63	-0.3
1,969,493	+		MPMX19_01887	0.63	-0.0
1,969,494	-		MPMX19_01887	0.63	-1.0
1,969,494	-		MPMX19_01887	0.63	-0.8
1,969,494	-		MPMX19_01887	0.63	-2.3
1,969,494	-		MPMX19_01887	0.63	-0.2
1,969,511	+		MPMX19_01887	0.67	+0.6
1,969,511	+		MPMX19_01887	0.67	+0.5
1,969,529	+		MPMX19_01887	0.71	-1.2
1,969,529	+		MPMX19_01887	0.71	-0.1
1,969,530	-		MPMX19_01887	0.71	-1.4
1,969,530	-		MPMX19_01887	0.71	-0.3
1,969,628	+				-0.2
1,969,628	+				-0.4
1,969,628	+				-0.5
1,969,628	+				-0.8
1,969,629	-				-0.2
1,969,629	-				+0.0
1,969,629	-				-0.8
1,969,629	-				+0.1
1,969,629	-				-0.2
1,969,629	-				-1.2
1,969,629	-				-1.0
1,969,714	+				-0.6
1,969,714	+				+0.2
1,969,715	-				-0.4
1,969,715	-				+0.2
1,969,715	-				+0.2
1,969,779	+				+1.0
1,969,780	-				-0.6
1,969,780	-				-1.3
1,969,780	-				-0.2
1,969,830	+				-0.6
1,969,830	+				-0.4
1,969,830	+				-0.6
1,969,830	+				-0.4
1,969,830	+				+0.2
1,969,830	+				-0.8
1,969,830	+				+0.6
1,969,831	-				-0.1
1,969,831	-				-0.2
1,969,831	-				+0.6