Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01835

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,915,367	+		MPMX19_01833	0.75	+0.1
1,915,367	+		MPMX19_01833	0.75	+0.1
1,915,367	+		MPMX19_01833	0.75	-0.4
1,915,367	+		MPMX19_01833	0.75	+0.7
1,915,367	+		MPMX19_01833	0.75	-0.9
1,915,367	+		MPMX19_01833	0.75	+0.1
1,915,367	+		MPMX19_01833	0.75	-0.1
1,915,367	+		MPMX19_01833	0.75	+0.1
1,915,368	-		MPMX19_01833	0.75	+0.7
1,915,368	-		MPMX19_01833	0.75	-1.8
1,915,368	-		MPMX19_01833	0.75	+0.3
1,915,368	-		MPMX19_01833	0.75	+0.4
1,915,368	-		MPMX19_01833	0.75	-0.4
1,915,368	-		MPMX19_01833	0.75	+1.3
1,915,368	-		MPMX19_01833	0.75	+0.8
1,915,402	+		MPMX19_01833	0.76	+1.0
1,915,403	-		MPMX19_01833	0.76	-0.7
1,915,403	-		MPMX19_01833	0.76	+0.7
1,915,403	-		MPMX19_01833	0.76	-0.4
1,915,763	+				-0.0
1,916,090	+		MPMX19_01834	0.76	-3.0
1,916,090	+		MPMX19_01834	0.76	-0.0
1,916,091	-		MPMX19_01834	0.76	-1.4
1,916,250	+				+0.3
1,916,250	+				-1.5
1,916,251	-				+0.1
1,916,251	-				+0.8
1,916,251	-				-0.0
1,916,251	-				-1.3
1,916,251	-				+0.5
1,916,251	-				+0.2
1,916,251	-				-0.4
1,916,251	-				+0.2
1,916,387	-		MPMX19_01835	0.21	+0.4
1,916,652	+				-0.2
1,916,652	+				-0.0
1,916,652	+				-0.0
1,916,652	+				-1.6
1,916,652	+				-1.3
1,916,652	+				-0.1
1,916,652	+				-1.5
1,916,652	+				+0.1
1,916,652	+				-0.2
1,916,652	+				+1.3
1,916,652	+				-1.4
1,916,652	+				+0.3
1,916,652	+				-0.1
1,916,652	+				-0.3
1,916,652	+				+0.4
1,916,652	+				-0.8
1,916,652	+				+1.3
1,916,652	+				+1.0
1,916,652	+				-0.0
1,916,652	+				-0.0
1,916,652	+				+0.1
1,916,653	-				+0.1
1,916,653	-				+0.7
1,916,653	-				-1.2
1,916,653	-				-0.6
1,916,653	-				-0.1
1,916,653	-				+0.2
1,916,653	-				-0.0
1,916,653	-				-0.5
1,916,653	-				+0.9
1,916,653	-				-0.8
1,916,653	-				+0.4
1,916,653	-				-1.4
1,916,653	-				-0.5
1,916,653	-				+0.8
1,916,653	-				-1.0
1,916,653	-				-0.7
1,917,092	+		MPMX19_01836	0.34	+0.2
1,917,092	+		MPMX19_01836	0.34	-1.5
1,917,092	+		MPMX19_01836	0.34	+1.1
1,917,092	+		MPMX19_01836	0.34	+0.0
1,917,093	-		MPMX19_01836	0.34	+1.2
1,917,093	-		MPMX19_01836	0.34	-1.3
1,917,093	-		MPMX19_01836	0.34	-0.3
1,917,093	-		MPMX19_01836	0.34	+0.9
1,917,093	-		MPMX19_01836	0.34	+0.2
1,917,164	+		MPMX19_01836	0.54	-0.8
1,917,164	+		MPMX19_01836	0.54	-0.7
1,917,165	-		MPMX19_01836	0.54	-0.4
1,917,165	-		MPMX19_01836	0.54	+0.7
1,917,224	+		MPMX19_01836	0.70	+0.1
1,917,224	+		MPMX19_01836	0.70	-0.9
1,917,224	+		MPMX19_01836	0.70	-0.3
1,917,225	-		MPMX19_01836	0.70	+0.9
1,917,225	-		MPMX19_01836	0.70	-0.0
1,917,225	-		MPMX19_01836	0.70	+0.7
1,917,225	-		MPMX19_01836	0.70	-0.1
1,917,225	-		MPMX19_01836	0.70	-2.4
1,917,225	-		MPMX19_01836	0.70	-0.5
1,917,332	+				+0.7
1,917,332	+				+0.4
1,917,333	-				-1.0