Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01820

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,901,711	+				+0.5
1,901,711	+				+0.4
1,901,711	+				+0.2
1,901,711	+				+0.3
1,901,712	-				+1.1
1,901,712	-				+0.6
1,901,726	+				-0.0
1,901,727	-				+0.2
1,901,840	+		MPMX19_01818	0.31	-0.0
1,901,840	+		MPMX19_01818	0.31	+1.5
1,901,840	+		MPMX19_01818	0.31	-0.5
1,901,840	+		MPMX19_01818	0.31	-0.5
1,901,840	+		MPMX19_01818	0.31	-0.6
1,901,840	+		MPMX19_01818	0.31	-0.0
1,901,840	+		MPMX19_01818	0.31	+1.2
1,901,840	+		MPMX19_01818	0.31	-0.4
1,901,840	+		MPMX19_01818	0.31	-0.3
1,901,840	+		MPMX19_01818	0.31	+0.1
1,901,840	+		MPMX19_01818	0.31	-2.3
1,901,840	+		MPMX19_01818	0.31	+0.1
1,901,840	+		MPMX19_01818	0.31	+0.2
1,901,840	+		MPMX19_01818	0.31	-0.8
1,901,840	+		MPMX19_01818	0.31	+1.0
1,901,840	+		MPMX19_01818	0.31	-0.7
1,901,840	+		MPMX19_01818	0.31	-0.5
1,901,840	+		MPMX19_01818	0.31	-0.5
1,901,841	-		MPMX19_01818	0.32	+0.5
1,901,841	-		MPMX19_01818	0.32	+0.2
1,901,841	-		MPMX19_01818	0.32	+0.2
1,901,841	-		MPMX19_01818	0.32	-0.6
1,901,841	-		MPMX19_01818	0.32	-0.9
1,901,841	-		MPMX19_01818	0.32	+1.1
1,901,841	-		MPMX19_01818	0.32	+2.4
1,901,841	-		MPMX19_01818	0.32	-1.0
1,901,841	-		MPMX19_01818	0.32	+0.5
1,901,841	-		MPMX19_01818	0.32	+1.3
1,901,841	-		MPMX19_01818	0.32	-0.5
1,901,841	-		MPMX19_01818	0.32	-2.5
1,901,841	-		MPMX19_01818	0.32	-0.3
1,901,841	-		MPMX19_01818	0.32	-0.6
1,901,841	-		MPMX19_01818	0.32	-1.5
1,901,841	-		MPMX19_01818	0.32	+0.7
1,901,841	-		MPMX19_01818	0.32	-0.7
1,901,841	-		MPMX19_01818	0.32	-0.8
1,902,025	+		MPMX19_01818	0.72	+0.3
1,902,025	+		MPMX19_01818	0.72	+0.8
1,902,025	+		MPMX19_01818	0.72	-1.3
1,902,025	+		MPMX19_01818	0.72	-0.8
1,902,026	-		MPMX19_01818	0.73	-0.5
1,902,026	-		MPMX19_01818	0.73	+0.1
1,902,026	-		MPMX19_01818	0.73	-1.0
1,902,026	-		MPMX19_01818	0.73	+2.1
1,902,026	-		MPMX19_01818	0.73	+1.0
1,902,147	-				+0.2
1,902,147	-				-0.7
1,902,233	+				-1.8
1,902,233	+				+0.5
1,902,233	+				+0.2
1,902,233	+				-0.3
1,902,234	-				+0.3
1,902,420	+		MPMX19_01819	0.37	+1.3
1,902,420	+		MPMX19_01819	0.37	-1.3
1,902,420	+		MPMX19_01819	0.37	-1.2
1,902,420	+		MPMX19_01819	0.37	-0.3
1,902,421	-		MPMX19_01819	0.38	-0.2
1,902,421	-		MPMX19_01819	0.38	-0.5
1,902,421	-		MPMX19_01819	0.38	-0.6
1,902,421	-		MPMX19_01819	0.38	-1.5
1,902,421	-		MPMX19_01819	0.38	-0.3
1,902,421	-		MPMX19_01819	0.38	+0.2
1,902,486	+		MPMX19_01819	0.54	-0.3
1,902,486	+		MPMX19_01819	0.54	-0.2
1,902,487	-		MPMX19_01819	0.54	+0.5
1,902,487	-		MPMX19_01819	0.54	-0.3
1,902,487	-		MPMX19_01819	0.54	-0.0
1,902,487	-		MPMX19_01819	0.54	-1.2
1,902,694	+				+0.7
1,902,694	+				+0.0
1,902,694	+				+0.2
1,902,694	+				+0.8
1,902,694	+				-1.3
1,902,694	+				-0.8
1,902,694	+				-0.7
1,902,694	+				-1.2
1,902,694	+				+1.0
1,902,694	+				-0.3
1,902,694	+				-0.1
1,902,694	+				-1.5
1,902,694	+				+0.2
1,902,694	+				+0.2
1,902,694	+				-0.8
1,902,694	+				+1.4
1,902,694	+				-0.3
1,902,694	+				+0.4
1,902,694	+				-0.6
1,902,694	+				+0.2
1,902,694	+				+0.4
1,902,694	+				+0.7
1,902,694	+				-0.3
1,902,694	+				-1.3
1,902,694	+				-0.8
1,902,694	+				+0.3
1,902,695	-				+0.3
1,902,695	-				-1.4
1,902,695	-				-0.2
1,902,695	-				+0.8
1,902,695	-				+0.2
1,902,695	-				-1.1
1,902,695	-				-1.5
1,902,695	-				-0.9
1,902,695	-				+0.8
1,902,695	-				+0.2
1,902,695	-				-0.2
1,902,695	-				+0.3
1,902,695	-				-0.4
1,902,695	-				+0.2
1,902,695	-				-0.3
1,902,695	-				+0.7
1,902,695	-				-0.8
1,902,695	-				-1.0
1,902,742	+		MPMX19_01820	0.11	-0.5
1,902,742	+		MPMX19_01820	0.11	-0.5
1,902,743	-		MPMX19_01820	0.11	-0.9
1,902,743	-		MPMX19_01820	0.11	-0.7
1,902,803	+		MPMX19_01820	0.19	-1.0
1,902,803	+		MPMX19_01820	0.19	-1.1
1,902,804	-		MPMX19_01820	0.19	-0.5
1,902,804	-		MPMX19_01820	0.19	-1.6
1,902,804	-		MPMX19_01820	0.19	-0.9
1,902,804	-		MPMX19_01820	0.19	+0.1
1,902,804	-		MPMX19_01820	0.19	-1.6
1,902,862	+		MPMX19_01820	0.27	+1.1
1,902,862	+		MPMX19_01820	0.27	-1.0
1,902,862	+		MPMX19_01820	0.27	+0.7
1,902,862	+		MPMX19_01820	0.27	-2.3
1,902,862	+		MPMX19_01820	0.27	-1.5
1,902,862	+		MPMX19_01820	0.27	-0.2
1,902,862	+		MPMX19_01820	0.27	-0.5
1,902,862	+		MPMX19_01820	0.27	-1.1
1,902,862	+		MPMX19_01820	0.27	+0.3
1,902,862	+		MPMX19_01820	0.27	-0.5
1,902,863	-		MPMX19_01820	0.28	-1.3
1,902,863	-		MPMX19_01820	0.28	+0.3
1,902,863	-		MPMX19_01820	0.28	-0.0
1,902,863	-		MPMX19_01820	0.28	-0.5
1,902,863	-		MPMX19_01820	0.28	-0.8
1,902,863	-		MPMX19_01820	0.28	+1.0
1,902,863	-		MPMX19_01820	0.28	+1.9
1,902,863	-		MPMX19_01820	0.28	-0.0
1,902,863	-		MPMX19_01820	0.28	+1.0
1,902,863	-		MPMX19_01820	0.28	+0.5
1,902,863	-		MPMX19_01820	0.28	+0.8
1,902,863	-		MPMX19_01820	0.28	-0.5
1,902,863	-		MPMX19_01820	0.28	-0.0
1,902,863	-		MPMX19_01820	0.28	-2.0
1,902,863	-		MPMX19_01820	0.28	-0.0
1,902,863	-		MPMX19_01820	0.28	-1.9
1,902,931	+		MPMX19_01820	0.37	-0.7
1,902,931	+		MPMX19_01820	0.37	+0.0
1,902,931	+		MPMX19_01820	0.37	-2.5
1,902,931	+		MPMX19_01820	0.37	-0.3
1,902,931	+		MPMX19_01820	0.37	-0.7
1,902,931	+		MPMX19_01820	0.37	-0.3
1,902,931	+		MPMX19_01820	0.37	+0.7
1,902,931	+		MPMX19_01820	0.37	-0.5
1,902,931	+		MPMX19_01820	0.37	-1.0
1,902,931	+		MPMX19_01820	0.37	+0.3
1,902,932	-		MPMX19_01820	0.37	-0.1
1,902,932	-		MPMX19_01820	0.37	+0.2
1,902,932	-		MPMX19_01820	0.37	-0.3
1,902,932	-		MPMX19_01820	0.37	-0.2
1,902,932	-		MPMX19_01820	0.37	+1.5
1,902,932	-		MPMX19_01820	0.37	-0.6
1,902,932	-		MPMX19_01820	0.37	+0.1
1,902,932	-		MPMX19_01820	0.37	-1.2
1,902,932	-		MPMX19_01820	0.37	-1.8
1,902,932	-		MPMX19_01820	0.37	-0.2
1,902,932	-		MPMX19_01820	0.37	+1.0
1,902,932	-		MPMX19_01820	0.37	+0.4
1,903,366	+				+0.0
1,903,366	+				-1.0
1,903,366	+				-0.5
1,903,366	+				-0.1
1,903,366	+				-0.9
1,903,366	+				+0.2
1,903,366	+				-0.1
1,903,366	+				-0.4
1,903,366	+				+0.2
1,903,366	+				+0.9
1,903,366	+				-2.9
1,903,366	+				-0.6
1,903,366	+				+0.2
1,903,366	+				-0.1
1,903,366	+				+0.1
1,903,366	+				+0.7
1,903,367	-				-2.0
1,903,367	-				-0.3
1,903,367	-				+0.4
1,903,367	-				+0.7
1,903,367	-				-1.1
1,903,367	-				-0.2
1,903,367	-				-0.8
1,903,367	-				-0.8
1,903,367	-				+0.4
1,903,367	-				+1.0
1,903,367	-				-0.2
1,903,367	-				-0.8
1,903,367	-				-2.6
1,903,367	-				-1.3
1,903,552	+				+0.7
1,903,552	+				-0.4
1,903,552	+				+1.1
1,903,553	-				-1.5
1,903,553	-				-1.5
1,903,553	-				-0.3
1,903,553	-				+1.9
1,903,672	+				+0.5
1,903,672	+				+0.1
1,903,672	+				-0.2
1,903,672	+				-1.0
1,903,672	+				+1.3
1,903,672	+				-0.3
1,903,672	+				+0.2
1,903,672	+				-0.3
1,903,673	-				-0.6
1,903,673	-				-0.8
1,903,673	-				-0.0
1,903,673	-				-1.9
1,903,673	-				+0.5
1,903,865	+				-1.3
1,903,865	+				-0.7
1,903,865	+				+0.2
1,903,866	-				-0.8
1,903,866	-				+0.1
1,903,866	-				-0.0
1,903,866	-				-1.3
1,903,866	-				+1.0
1,903,866	-				+0.7
1,903,866	-				+0.2
1,903,866	-				-0.5
1,903,866	-				-1.4
1,904,222	+		MPMX19_01822	0.24	-1.0
1,904,222	+		MPMX19_01822	0.24	-0.0
1,904,222	+		MPMX19_01822	0.24	-0.0
1,904,222	+		MPMX19_01822	0.24	+1.0
1,904,222	+		MPMX19_01822	0.24	-0.0
1,904,222	+		MPMX19_01822	0.24	-0.9
1,904,222	+		MPMX19_01822	0.24	+0.2
1,904,222	+		MPMX19_01822	0.24	-0.8
1,904,223	-		MPMX19_01822	0.24	+0.9
1,904,223	-		MPMX19_01822	0.24	+2.5
1,904,223	-		MPMX19_01822	0.24	-0.5
1,904,223	-		MPMX19_01822	0.24	-0.0
1,904,223	-		MPMX19_01822	0.24	-0.4
1,904,223	-		MPMX19_01822	0.24	-1.3
1,904,223	-		MPMX19_01822	0.24	-0.5
1,904,223	-		MPMX19_01822	0.24	+1.5
1,904,223	-		MPMX19_01822	0.24	-0.0
1,904,223	-		MPMX19_01822	0.24	-0.0
1,904,223	-		MPMX19_01822	0.24	-1.0
1,904,223	-		MPMX19_01822	0.24	-2.0
1,904,360	+		MPMX19_01822	0.32	-0.5
1,904,360	+		MPMX19_01822	0.32	-0.3
1,904,361	-		MPMX19_01822	0.32	-0.0
1,904,361	-		MPMX19_01822	0.32	+0.3
1,904,361	-		MPMX19_01822	0.32	-0.3
1,904,361	-		MPMX19_01822	0.32	-0.6