Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01790

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,875,961	+				-1.0
1,875,962	-				-1.3
1,875,962	-				-0.2
1,875,962	-				+0.6
1,875,962	-				-1.4
1,875,962	-				-1.5
1,875,962	-				-0.3
1,876,039	+				+1.5
1,876,039	+				+1.3
1,876,039	+				-0.5
1,876,039	+				-0.0
1,876,040	-				+0.2
1,876,040	-				-0.8
1,876,040	-				-1.4
1,876,051	+				-1.9
1,876,051	+				+0.5
1,876,051	+				+0.0
1,876,051	+				+1.1
1,876,051	+				-0.6
1,876,052	-				-0.4
1,876,052	-				-0.4
1,876,052	-				-1.5
1,876,161	+		MPMX19_01789	0.18	+1.0
1,876,161	+		MPMX19_01789	0.18	+0.4
1,876,284	+		MPMX19_01789	0.58	-1.5
1,876,284	+		MPMX19_01789	0.58	-0.3
1,876,603	+		MPMX19_01790	0.59	+0.4
1,876,603	+		MPMX19_01790	0.59	-0.9
1,876,603	+		MPMX19_01790	0.59	+1.5
1,876,603	+		MPMX19_01790	0.59	+1.8
1,876,603	+		MPMX19_01790	0.59	+0.8
1,876,604	-		MPMX19_01790	0.59	-1.6
1,876,604	-		MPMX19_01790	0.59	-0.0
1,876,604	-		MPMX19_01790	0.59	-0.7
1,876,604	-		MPMX19_01790	0.59	+1.5
1,876,604	-		MPMX19_01790	0.59	+0.7
1,876,604	-		MPMX19_01790	0.59	-0.7
1,876,604	-		MPMX19_01790	0.59	+0.5
1,876,769	+				-1.3
1,876,769	+				-0.7
1,876,769	+				-1.0
1,876,769	+				-3.0
1,876,769	+				+0.2
1,876,769	+				-1.3
1,876,769	+				-0.1
1,876,770	-				-1.6
1,876,770	-				-1.0
1,876,770	-				+1.0
1,876,803	+				-0.7
1,876,803	+				+0.1
1,876,803	+				-1.9
1,876,803	+				-0.8
1,876,803	+				+0.2
1,876,803	+				-1.5
1,876,804	-				+0.7
1,876,804	-				-0.6
1,876,804	-				-0.2
1,876,804	-				+1.3
1,876,804	-				+0.3
1,876,804	-				-0.9
1,876,804	-				-3.8
1,876,804	-				-0.2
1,876,810	+				-1.1
1,876,810	+				-1.4
1,876,810	+				+0.5
1,876,810	+				-0.8
1,876,810	+				-0.6
1,876,810	+				-0.6
1,876,810	+				-0.9
1,876,810	+				+0.1
1,876,810	+				+0.9
1,876,810	+				-0.7
1,876,811	-				-0.8
1,876,811	-				-1.0
1,876,811	-				+0.1
1,876,811	-				+0.2
1,876,811	-				+0.7
1,876,811	-				+1.1
1,876,811	-				+0.2
1,876,811	-				+0.6
1,876,811	-				+0.5
1,876,811	-				+0.4
1,876,811	-				-1.0
1,876,811	-				-0.0
1,876,811	-				+1.0
1,876,811	-				-0.8
1,876,811	-				+1.3
1,876,928	+				-0.4
1,876,928	+				-0.5
1,876,929	-				+0.3
1,876,929	-				-0.6
1,876,929	-				+1.2
1,877,426	+		MPMX19_01791	0.64	-2.0
1,877,426	+		MPMX19_01791	0.64	-1.4
1,877,426	+		MPMX19_01791	0.64	+0.5
1,877,426	+		MPMX19_01791	0.64	-0.7
1,877,427	-		MPMX19_01791	0.65	-0.3
1,877,427	-		MPMX19_01791	0.65	-0.6
1,877,427	-		MPMX19_01791	0.65	-0.7
1,877,427	-		MPMX19_01791	0.65	-0.6
1,877,427	-		MPMX19_01791	0.65	+0.6
1,877,600	+		MPMX19_01791	0.84	-0.2
1,877,600	+		MPMX19_01791	0.84	-0.0
1,877,600	+		MPMX19_01791	0.84	+0.2
1,877,600	+		MPMX19_01791	0.84	-0.2
1,877,600	+		MPMX19_01791	0.84	+0.8
1,877,600	+		MPMX19_01791	0.84	+0.8
1,877,600	+		MPMX19_01791	0.84	+0.6
1,877,600	+		MPMX19_01791	0.84	-1.9
1,877,601	-		MPMX19_01791	0.84	-1.2
1,877,601	-		MPMX19_01791	0.84	+0.1
1,877,601	-		MPMX19_01791	0.84	-0.4
1,877,601	-		MPMX19_01791	0.84	+0.4
1,877,601	-		MPMX19_01791	0.84	+0.6
1,877,601	-		MPMX19_01791	0.84	-0.9
1,877,601	-		MPMX19_01791	0.84	+0.5
1,877,601	-		MPMX19_01791	0.84	-0.5