Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01591

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,664,418	+				-0.9
1,664,418	+				-1.5
1,664,419	-				+0.7
1,664,419	-				-0.1
1,664,545	-		MPMX19_01590	0.19	-1.9
1,664,545	-		MPMX19_01590	0.19	+0.1
1,664,545	-		MPMX19_01590	0.19	+0.5
1,664,571	+		MPMX19_01590	0.22	+0.4
1,664,571	+		MPMX19_01590	0.22	+0.2
1,664,799	+		MPMX19_01590	0.52	-0.2
1,664,799	+		MPMX19_01590	0.52	-1.1
1,664,799	+		MPMX19_01590	0.52	-0.5
1,664,799	+		MPMX19_01590	0.52	-0.9
1,664,799	+		MPMX19_01590	0.52	+1.5
1,664,799	+		MPMX19_01590	0.52	+0.0
1,664,799	+		MPMX19_01590	0.52	-0.4
1,664,799	+		MPMX19_01590	0.52	-1.5
1,664,799	+		MPMX19_01590	0.52	-0.1
1,664,799	+		MPMX19_01590	0.52	-0.9
1,664,799	+		MPMX19_01590	0.52	-0.9
1,664,799	+		MPMX19_01590	0.52	-1.9
1,664,799	+		MPMX19_01590	0.52	-1.3
1,664,799	+		MPMX19_01590	0.52	+0.1
1,664,799	+		MPMX19_01590	0.52	+0.3
1,664,799	+		MPMX19_01590	0.52	-0.6
1,664,799	+		MPMX19_01590	0.52	+0.1
1,664,799	+		MPMX19_01590	0.52	-1.3
1,664,800	-		MPMX19_01590	0.52	+0.4
1,664,800	-		MPMX19_01590	0.52	-0.8
1,664,800	-		MPMX19_01590	0.52	+1.7
1,664,800	-		MPMX19_01590	0.52	-0.5
1,664,800	-		MPMX19_01590	0.52	+1.2
1,664,800	-		MPMX19_01590	0.52	+0.2
1,664,800	-		MPMX19_01590	0.52	-0.1
1,664,800	-		MPMX19_01590	0.52	+1.5
1,664,800	-		MPMX19_01590	0.52	+0.5
1,664,800	-		MPMX19_01590	0.52	+0.5
1,664,800	-		MPMX19_01590	0.52	-0.6
1,664,800	-		MPMX19_01590	0.52	-0.1
1,664,800	-		MPMX19_01590	0.52	+0.6
1,664,800	-		MPMX19_01590	0.52	+0.5
1,664,800	-		MPMX19_01590	0.52	+0.7
1,664,800	-		MPMX19_01590	0.52	-0.0
1,665,027	+		MPMX19_01590	0.82	+0.4
1,665,028	-		MPMX19_01590	0.82	-0.2
1,665,028	-		MPMX19_01590	0.82	-0.1
1,665,214	+				-1.3
1,665,214	+				+1.1
1,665,215	-				+0.5
1,665,712	+		MPMX19_01591	0.41	+1.6
1,665,712	+		MPMX19_01591	0.41	+0.4
1,665,712	+		MPMX19_01591	0.41	+1.2
1,665,712	+		MPMX19_01591	0.41	+0.4
1,665,712	+		MPMX19_01591	0.41	-0.9
1,665,712	+		MPMX19_01591	0.41	-0.1
1,665,713	-		MPMX19_01591	0.41	-1.3
1,665,713	-		MPMX19_01591	0.41	+0.1
1,665,713	-		MPMX19_01591	0.41	-0.4
1,665,713	-		MPMX19_01591	0.41	-0.7
1,665,775	+		MPMX19_01591	0.46	+0.5
1,665,775	+		MPMX19_01591	0.46	+0.2
1,665,775	+		MPMX19_01591	0.46	+0.3
1,665,775	+		MPMX19_01591	0.46	-0.1
1,665,775	+		MPMX19_01591	0.46	+1.2
1,665,775	+		MPMX19_01591	0.46	+0.9
1,665,775	+		MPMX19_01591	0.46	+0.2
1,665,775	+		MPMX19_01591	0.46	+0.2
1,665,775	+		MPMX19_01591	0.46	+0.9
1,665,775	+		MPMX19_01591	0.46	+0.2
1,665,776	-		MPMX19_01591	0.46	-1.6
1,665,776	-		MPMX19_01591	0.46	-1.9
1,665,776	-		MPMX19_01591	0.46	+0.0
1,665,776	-		MPMX19_01591	0.46	-0.2
1,665,776	-		MPMX19_01591	0.46	+0.5
1,665,776	-		MPMX19_01591	0.46	-1.2
1,665,776	-		MPMX19_01591	0.46	-0.1
1,665,776	-		MPMX19_01591	0.46	-1.1
1,665,776	-		MPMX19_01591	0.46	-0.3
1,665,776	-		MPMX19_01591	0.46	+0.2
1,665,776	-		MPMX19_01591	0.46	-0.8
1,665,776	-		MPMX19_01591	0.46	-0.1
1,665,776	-		MPMX19_01591	0.46	-1.8
1,665,776	-		MPMX19_01591	0.46	-0.3
1,665,776	-		MPMX19_01591	0.46	-0.1
1,665,776	-		MPMX19_01591	0.46	-0.2
1,665,776	-		MPMX19_01591	0.46	+0.5
1,665,776	-		MPMX19_01591	0.46	+0.3
1,665,776	-		MPMX19_01591	0.46	-1.1
1,665,776	-		MPMX19_01591	0.46	+0.0
1,665,776	-		MPMX19_01591	0.46	+1.5
1,665,776	-		MPMX19_01591	0.46	+1.0
1,665,776	-		MPMX19_01591	0.46	-0.6
1,665,784	+		MPMX19_01591	0.47	+0.1
1,665,785	-		MPMX19_01591	0.47	+0.7
1,665,785	-		MPMX19_01591	0.47	+1.3
1,666,003	+		MPMX19_01591	0.65	+1.9
1,666,003	+		MPMX19_01591	0.65	-0.8
1,666,003	+		MPMX19_01591	0.65	-1.6
1,666,153	+		MPMX19_01591	0.78	+0.4
1,666,153	+		MPMX19_01591	0.78	+0.3
1,666,153	+		MPMX19_01591	0.78	-1.6
1,666,153	+		MPMX19_01591	0.78	+1.1
1,666,153	+		MPMX19_01591	0.78	-0.2
1,666,153	+		MPMX19_01591	0.78	-0.1
1,666,153	+		MPMX19_01591	0.78	-1.1
1,666,153	+		MPMX19_01591	0.78	-0.9
1,666,153	+		MPMX19_01591	0.78	-0.5
1,666,153	+		MPMX19_01591	0.78	-1.9
1,666,153	+		MPMX19_01591	0.78	-0.9
1,666,154	-		MPMX19_01591	0.78	+1.2
1,666,154	-		MPMX19_01591	0.78	+1.0
1,666,154	-		MPMX19_01591	0.78	+0.1
1,666,154	-		MPMX19_01591	0.78	+0.9
1,666,154	-		MPMX19_01591	0.78	+1.0
1,666,154	-		MPMX19_01591	0.78	-1.6
1,666,154	-		MPMX19_01591	0.78	+1.2
1,666,154	-		MPMX19_01591	0.78	+0.2
1,666,154	-		MPMX19_01591	0.78	+0.7
1,666,154	-		MPMX19_01591	0.78	+0.5
1,666,154	-		MPMX19_01591	0.78	+0.4
1,666,303	+				-1.6
1,666,303	+				+1.3
1,666,304	-				-1.1
1,666,304	-				+0.2
1,666,453	+				+0.4
1,666,453	+				-0.9
1,666,453	+				+1.3
1,666,453	+				+0.3
1,666,453	+				+0.3
1,666,454	-				+1.5
1,667,236	-		MPMX19_01593	0.16	-0.2
1,667,236	-		MPMX19_01593	0.16	-1.1
1,667,236	-		MPMX19_01593	0.16	-0.1
1,667,236	-		MPMX19_01593	0.16	-0.6
1,667,236	-		MPMX19_01593	0.16	+0.3
1,667,236	-		MPMX19_01593	0.16	-0.8
1,667,236	-		MPMX19_01593	0.16	-0.4
1,667,236	-		MPMX19_01593	0.16	-1.5
1,667,236	-		MPMX19_01593	0.16	+0.2
1,667,406	+		MPMX19_01593	0.27	-1.5
1,667,407	-		MPMX19_01593	0.27	+0.3
1,667,407	-		MPMX19_01593	0.27	-1.1
1,667,407	-		MPMX19_01593	0.27	-0.5
1,667,407	-		MPMX19_01593	0.27	+1.1
1,667,407	-		MPMX19_01593	0.27	-0.5
1,667,407	-		MPMX19_01593	0.27	-0.3
1,667,407	-		MPMX19_01593	0.27	+1.3
1,667,407	-		MPMX19_01593	0.27	-0.5
1,667,407	-		MPMX19_01593	0.27	-2.3
1,667,407	-		MPMX19_01593	0.27	-0.1
1,667,422	-		MPMX19_01593	0.28	-0.8
1,667,422	-		MPMX19_01593	0.28	-0.3
1,667,422	-		MPMX19_01593	0.28	-1.9