Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01560

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
1,637,527	+		MPMX19_01559	0.32	+0.2
1,637,530	+		MPMX19_01559	0.33	-1.1
1,637,579	+		MPMX19_01559	0.36	-0.6
1,637,628	+		MPMX19_01559	0.40	-0.2
1,637,671	-		MPMX19_01559	0.43	+1.2
1,637,681	+		MPMX19_01559	0.44	-1.8
1,637,694	-		MPMX19_01559	0.45	-1.0
1,637,695	+		MPMX19_01559	0.45	+0.4
1,637,713	-		MPMX19_01559	0.46	+0.1
1,637,716	+		MPMX19_01559	0.47	-1.9
1,637,766	-		MPMX19_01559	0.50	+0.9
1,638,045	+		MPMX19_01559	0.71	+0.5
1,638,046	-		MPMX19_01559	0.71	-0.5
1,638,250	+		MPMX19_01559	0.86	-0.1
1,638,511	+				+2.1
1,638,522	+				-0.6
1,638,701	-		MPMX19_01560	0.27	-1.5
1,638,704	-		MPMX19_01560	0.27	-1.7
1,638,789	-		MPMX19_01560	0.36	-0.1
1,639,048	+		MPMX19_01560	0.65	+0.8
1,639,064	+		MPMX19_01560	0.67	-1.1
1,639,064	+		MPMX19_01560	0.67	-0.7
1,639,065	-		MPMX19_01560	0.67	-1.4
1,639,273	-				-1.8
1,639,317	+				-1.1
1,639,337	+				-0.9
1,639,391	+				-1.8
1,639,420	+				-0.8
1,639,420	+				-2.2
1,639,420	+				-0.1
1,639,421	-				-0.5
1,639,421	-				-2.0
1,639,514	+				+0.4
1,639,563	-				+0.7
1,639,629	+		MPMX19_01561	0.14	-1.2
1,639,629	+		MPMX19_01561	0.14	+0.7
1,639,630	-		MPMX19_01561	0.14	-0.1
1,639,630	-		MPMX19_01561	0.14	+0.2
1,639,697	-		MPMX19_01561	0.26	-1.3
1,639,697	-		MPMX19_01561	0.26	-0.6
1,639,697	-		MPMX19_01561	0.26	-1.3
1,639,697	-		MPMX19_01561	0.26	+0.7
1,639,697	-		MPMX19_01561	0.26	-0.1
1,639,697	-		MPMX19_01561	0.26	-0.1
1,639,697	-		MPMX19_01561	0.26	+0.4
1,639,697	-		MPMX19_01561	0.26	+0.2
1,639,697	-		MPMX19_01561	0.26	-0.6
1,639,883	-		MPMX19_01561	0.60	-1.3
1,639,965	-		MPMX19_01561	0.74	+0.9
1,639,965	-		MPMX19_01561	0.74	-0.4
1,639,965	-		MPMX19_01561	0.74	-0.6
1,639,965	-		MPMX19_01561	0.74	-0.2
1,639,965	-		MPMX19_01561	0.74	+0.8
1,639,965	-		MPMX19_01561	0.74	-0.1
1,639,965	-		MPMX19_01561	0.74	-0.9
1,639,965	-		MPMX19_01561	0.74	-0.2
1,639,965	-		MPMX19_01561	0.74	-0.8
1,639,965	-		MPMX19_01561	0.74	-0.3
1,639,965	-		MPMX19_01561	0.74	-0.6
1,639,965	-		MPMX19_01561	0.74	-1.8
1,640,007	+		MPMX19_01561	0.82	-0.6
1,640,007	+		MPMX19_01561	0.82	-0.5
1,640,007	+		MPMX19_01561	0.82	-0.3
1,640,007	+		MPMX19_01561	0.82	-0.8
1,640,007	+		MPMX19_01561	0.82	-0.2
1,640,007	+		MPMX19_01561	0.82	-0.1
1,640,007	+		MPMX19_01561	0.82	+1.1
1,640,007	+		MPMX19_01561	0.82	-2.1
1,640,007	+		MPMX19_01561	0.82	+0.2
1,640,007	+		MPMX19_01561	0.82	-0.1
1,640,007	+		MPMX19_01561	0.82	-0.9
1,640,007	+		MPMX19_01561	0.82	-0.6
1,640,007	+		MPMX19_01561	0.82	+0.8
1,640,007	+		MPMX19_01561	0.82	-0.5
1,640,007	+		MPMX19_01561	0.82	-2.1
1,640,007	+		MPMX19_01561	0.82	+0.3
1,640,007	+		MPMX19_01561	0.82	-0.8
1,640,007	+		MPMX19_01561	0.82	+0.3
1,640,007	+		MPMX19_01561	0.82	-0.8
1,640,007	+		MPMX19_01561	0.82	-1.5
1,640,046	+		MPMX19_01561	0.89	-0.6
1,640,046	+		MPMX19_01561	0.89	-0.3
1,640,047	-		MPMX19_01561	0.89	+0.5
1,640,081	+				-0.8
1,640,082	-				+0.8
1,640,082	-				-1.1
1,640,082	-				+0.3
1,640,082	-				-0.1
1,640,128	+				+0.3
1,640,129	-				-0.3
1,640,129	-				-1.5
1,640,215	+				+1.5
1,640,216	-				-0.5
1,640,247	-				-0.6
1,640,247	-				-0.6
1,640,247	-				+0.4
1,640,247	-				-1.2
1,640,247	-				-1.8
1,640,257	+				-0.3
1,640,358	+		MPMX19_01562	0.15	-1.3
1,640,358	+		MPMX19_01562	0.15	-0.3
1,640,358	+		MPMX19_01562	0.15	+0.7
1,640,358	+		MPMX19_01562	0.15	-1.9
1,640,358	+		MPMX19_01562	0.15	+0.2